Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000577A_C01 KMC000577A_c01
(997 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P35681|TCTP_ORYSA Translationally controlled tumor protein ho... 308 6e-83
sp|Q944T2|TCTP_SOYBN Translationally controlled tumor protein ho... 298 9e-80
sp|Q9M5G3|TCTP_HORVU Translationally controlled tumor protein ho... 297 2e-79
sp|Q9ZSW9|TCTP_HEVBR Translationally controlled tumor protein ho... 296 3e-79
gb|AAM34280.1|AF508970_1 translationally controlled tumor protei... 291 8e-78
>sp|P35681|TCTP_ORYSA Translationally controlled tumor protein homolog (TCTP)
gi|1072464|pir||A38958 IgE-dependent histamine-releasing
factor homolog - rice gi|303835|dbj|BAA02151.1| 21kd
polypeptide [Oryza sativa (japonica cultivar-group)]
Length = 168
Score = 308 bits (790), Expect = 6e-83
Identities = 149/168 (88%), Positives = 156/168 (92%)
Frame = -3
Query: 941 MLVYQDLLSGDELLSDSFPYREIENGCLWEVDGKWVVQGAVDVDIGANPSAEGGGEDEGV 762
MLVYQDLL+GDELLSDSFPYREIENG LWEVDGKWVVQGA+DVDIGANPSAEGGG+DEGV
Sbjct: 1 MLVYQDLLTGDELLSDSFPYREIENGILWEVDGKWVVQGAIDVDIGANPSAEGGGDDEGV 60
Query: 761 DDQAVKVVDIVDTFRLQEQPPFDKKMFVTFIKRYIKNLTPKLDEENQVLFKKHIEGATKY 582
DDQAVKVVDIVDTFRLQEQPPFDKK FVTF+KRYIKNL+ KLD E Q FKK+IEGATKY
Sbjct: 61 DDQAVKVVDIVDTFRLQEQPPFDKKQFVTFMKRYIKNLSAKLDAEKQEEFKKNIEGATKY 120
Query: 581 LLSKLSDLQFFVGESMHDDGSLVFAYYKDGAADPTFLYFAQGLKEVKC 438
LL KL DLQFFVGESMHDDG LVFAYYKDGA DPTFLYF+ GLKEVKC
Sbjct: 121 LLGKLKDLQFFVGESMHDDGGLVFAYYKDGATDPTFLYFSHGLKEVKC 168
>sp|Q944T2|TCTP_SOYBN Translationally controlled tumor protein homolog (TCTP)
gi|16417595|gb|AAL18814.1|AF421558_1 translationally
controlled tumor-like protein [Glycine max]
Length = 168
Score = 298 bits (763), Expect = 9e-80
Identities = 146/168 (86%), Positives = 153/168 (90%)
Frame = -3
Query: 941 MLVYQDLLSGDELLSDSFPYREIENGCLWEVDGKWVVQGAVDVDIGANPSAEGGGEDEGV 762
MLVYQDLL+GDELLSDSF Y+EIENG LWEV+GKWVV+GAVDVDIGANPSAEGGGEDEGV
Sbjct: 1 MLVYQDLLTGDELLSDSFRYKEIENGMLWEVEGKWVVKGAVDVDIGANPSAEGGGEDEGV 60
Query: 761 DDQAVKVVDIVDTFRLQEQPPFDKKMFVTFIKRYIKNLTPKLDEENQVLFKKHIEGATKY 582
DD AVKVVDIVDTFRLQEQP FDKK FVTF+KR+IKNLTPKLD E Q LFKKHIEGATKY
Sbjct: 61 DDAAVKVVDIVDTFRLQEQPAFDKKQFVTFMKRFIKNLTPKLDAEQQELFKKHIEGATKY 120
Query: 581 LLSKLSDLQFFVGESMHDDGSLVFAYYKDGAADPTFLYFAQGLKEVKC 438
LLSK+ D QFFVGESM DD LVFAYYKDGAADPTFLYFA LKEVKC
Sbjct: 121 LLSKIKDFQFFVGESMGDDACLVFAYYKDGAADPTFLYFAYALKEVKC 168
>sp|Q9M5G3|TCTP_HORVU Translationally controlled tumor protein homolog (TCTP) (HTP)
Length = 168
Score = 297 bits (760), Expect = 2e-79
Identities = 144/168 (85%), Positives = 153/168 (90%)
Frame = -3
Query: 941 MLVYQDLLSGDELLSDSFPYREIENGCLWEVDGKWVVQGAVDVDIGANPSAEGGGEDEGV 762
MLVYQD LSGDELLSDSFPYRE+ENG LWEVDG WVVQGAVDVDIGANPSAEGGGEDEGV
Sbjct: 1 MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGEDEGV 60
Query: 761 DDQAVKVVDIVDTFRLQEQPPFDKKMFVTFIKRYIKNLTPKLDEENQVLFKKHIEGATKY 582
DDQAVKVVDIVDTFRLQEQP FDKK F+ +IKRYIKNLT KL+ E FKK++E ATKY
Sbjct: 61 DDQAVKVVDIVDTFRLQEQPAFDKKQFIAYIKRYIKNLTAKLEGEELDAFKKNVESATKY 120
Query: 581 LLSKLSDLQFFVGESMHDDGSLVFAYYKDGAADPTFLYFAQGLKEVKC 438
LLSKL DLQFFVGESMHDDGS+VFAYY++GAADPTFLYFA GLKEVKC
Sbjct: 121 LLSKLKDLQFFVGESMHDDGSVVFAYYREGAADPTFLYFAHGLKEVKC 168
>sp|Q9ZSW9|TCTP_HEVBR Translationally controlled tumor protein homolog (TCTP)
gi|4193388|gb|AAD10032.1| translationally controlled
tumor protein [Hevea brasiliensis]
Length = 168
Score = 296 bits (758), Expect = 3e-79
Identities = 145/168 (86%), Positives = 154/168 (91%)
Frame = -3
Query: 941 MLVYQDLLSGDELLSDSFPYREIENGCLWEVDGKWVVQGAVDVDIGANPSAEGGGEDEGV 762
MLVYQDLL+GDELLSDSFPY+EI NG LWEV+GKWVVQGAVDVDIGANPSAEG EDEGV
Sbjct: 1 MLVYQDLLTGDELLSDSFPYKEIHNGILWEVEGKWVVQGAVDVDIGANPSAEGADEDEGV 60
Query: 761 DDQAVKVVDIVDTFRLQEQPPFDKKMFVTFIKRYIKNLTPKLDEENQVLFKKHIEGATKY 582
DDQAVKVVDIVDTFRLQEQP FDKK FVT++KR+IK LTPKLDEE Q FKK+IEGATK+
Sbjct: 61 DDQAVKVVDIVDTFRLQEQPAFDKKQFVTYMKRFIKLLTPKLDEEKQESFKKNIEGATKF 120
Query: 581 LLSKLSDLQFFVGESMHDDGSLVFAYYKDGAADPTFLYFAQGLKEVKC 438
LLSKLSDLQFFVGESMHDDGSLVFAYY+ GA DPTFLYFA LKEVKC
Sbjct: 121 LLSKLSDLQFFVGESMHDDGSLVFAYYRGGATDPTFLYFAYALKEVKC 168
>gb|AAM34280.1|AF508970_1 translationally controlled tumor protein [Triticum aestivum]
Length = 168
Score = 291 bits (746), Expect = 8e-78
Identities = 140/168 (83%), Positives = 154/168 (91%)
Frame = -3
Query: 941 MLVYQDLLSGDELLSDSFPYREIENGCLWEVDGKWVVQGAVDVDIGANPSAEGGGEDEGV 762
MLVYQD LSGDELLSDSFPYRE+ENG LWEVDG WVVQGAVDVDIGANPSAEGGG+DEGV
Sbjct: 1 MLVYQDKLSGDELLSDSFPYRELENGVLWEVDGHWVVQGAVDVDIGANPSAEGGGDDEGV 60
Query: 761 DDQAVKVVDIVDTFRLQEQPPFDKKMFVTFIKRYIKNLTPKLDEENQVLFKKHIEGATKY 582
DDQAVKVVDIVDTFRLQEQP FDKK F++ +KRYIKNL+ KL+ ++ +FKK++E ATKY
Sbjct: 61 DDQAVKVVDIVDTFRLQEQPAFDKKQFISHMKRYIKNLSAKLEGDDLDVFKKNVESATKY 120
Query: 581 LLSKLSDLQFFVGESMHDDGSLVFAYYKDGAADPTFLYFAQGLKEVKC 438
LLSKL DLQFFVGESMHDDG +VFAYYK+GAADPTFLYFA GLKEVKC
Sbjct: 121 LLSKLKDLQFFVGESMHDDGGVVFAYYKEGAADPTFLYFAHGLKEVKC 168
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 860,075,534
Number of Sequences: 1393205
Number of extensions: 19549646
Number of successful extensions: 67530
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 60067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 66763
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 57117888189
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
