Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000557A_C02 KMC000557A_c02
(560 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAD27911.1| putative L-asparaginase; similar to S. pombe SPA... 34 1.4
ref|NP_592784.1| L-asparaginase precursor [Schizosaccharomyces p... 34 1.4
gb|EAA00877.1| agCP12474 [Anopheles gambiae str. PEST] 32 4.1
ref|NP_625600.1| putative sugar acetyltransferase [Streptomyces ... 32 4.1
ref|XP_139512.1| similar to RNA-binding protein EWS [Mus musculus] 32 4.1
>emb|CAD27911.1| putative L-asparaginase; similar to S. pombe SPAC977.12 (paralog);
similar to S. pombe SPAC186.03 (paralog); similar to S.
cerevisiae ASP3 [Schizosaccharomyces pombe]
Length = 356
Score = 33.9 bits (76), Expect = 1.4
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +3
Query: 228 WVDLG----TYLVRTHGVPMAYPYRVRTRYGYNAILGVPVHHRN 347
W D G + L+R H +P+ Y +R Y N+ LG+P + N
Sbjct: 285 WTDDGNEVISSLIREHNIPVVYSHRTAEGYSSNSCLGIPSYFLN 328
>ref|NP_592784.1| L-asparaginase precursor [Schizosaccharomyces pombe]
gi|11266090|pir||T50284 asparaginase (EC 3.5.1.1)
precursor [similarity] - fission yeast
(Schizosaccharomyces pombe) gi|6478618|gb|AAF13924.1|
unknown [Schizosaccharomyces pombe]
gi|6742162|emb|CAB69634.1| L-asparaginase (putative);
similar to S. pombe SPAP8B6.05C and SPAC186.03; similar
to S. cerevisiae ASP3 [Schizosaccharomyces pombe]
Length = 356
Score = 33.9 bits (76), Expect = 1.4
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 4/44 (9%)
Frame = +3
Query: 228 WVDLG----TYLVRTHGVPMAYPYRVRTRYGYNAILGVPVHHRN 347
W D G + L+R H +P+ Y +R Y N+ LG+P + N
Sbjct: 285 WTDDGNEVISSLIREHNIPVVYSHRTAEGYSSNSCLGIPSYFLN 328
>gb|EAA00877.1| agCP12474 [Anopheles gambiae str. PEST]
Length = 359
Score = 32.3 bits (72), Expect = 4.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 211 TPVFFFGWTWVRTWYVPTAYPW 276
TPV+F+ TW W+V T + W
Sbjct: 209 TPVYFWNETWTNAWFVATLFRW 230
>ref|NP_625600.1| putative sugar acetyltransferase [Streptomyces coelicolor A3(2)]
gi|14575571|emb|CAC42861.1| putative sugar
acetyltransferase [Streptomyces coelicolor A3(2)]
Length = 267
Score = 32.3 bits (72), Expect = 4.1
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 169 HGRTQTYPWRTQKRTPVFFFGWTWV-RTWYVPTAYPWRTRTGYVPGTGT 312
H + WR++ GW WV RT V A+P R R G + GTGT
Sbjct: 3 HRKNTFSSWRSRLAQKAVHAGWAWVQRTGSVTAAHPGRFRFGAL-GTGT 50
>ref|XP_139512.1| similar to RNA-binding protein EWS [Mus musculus]
Length = 436
Score = 32.3 bits (72), Expect = 4.1
Identities = 19/57 (33%), Positives = 28/57 (48%), Gaps = 7/57 (12%)
Frame = +3
Query: 156 YPEYPRTYPNLPVAYPKTYPSFFF------WVDLGTYLVR-THGVPMAYPYRVRTRY 305
YP+ P +YP PV P +YP+ + D +Y + THG P +Y + T Y
Sbjct: 62 YPQVPGSYPMQPVTGPPSYPATSYSSSQPTSYDQSSYSQQNTHGQPSSYGQQPPTSY 118
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 576,394,108
Number of Sequences: 1393205
Number of extensions: 14907049
Number of successful extensions: 40834
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 38682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40788
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
