>KMC000550A_C01 KMC000550A_c01
cATCTCAAAAGCTATTATTTCAAGCTTCTCATTATGCGATTATCTGGCAAAATCGATTCT
AGTTACATAATATTTTTTCCAAACATGCACTAAATCTCAACTAGATGACAAAAAGTGCTT
TTCAATTAGGAAGCATATTTGAGTGGAGCTAGCTATGATTTACATAGCTTTGAAAACAAA
ACCACTAAAAAAAAGCCTTTTCATTTGCATGCTTGTAAAGATCGCAGTCTGAAGATTTCA
ATGTGCAAGGTTCAGCACCAATCAGCATGTTGATAACCTCTCTCATGGTAGGGCGTAAAG
ATGGAAGCTTAGTGGTGCACTTGATAGCAATCTTCAAGACCTTTATCATATCTTCACCAC
ACTCCAATGCTACTCTGTCATCAAGGATGTTAAGAATGCTTTCATGGTCATTCAGATGAG
TCAAAACCCAATAAACAATATCCTTAGCTTCTCCATATTCCTCTTCAATGGGTTTTCTGC
CAGAGACTAATTCTAATAGCACCACTCCGAAGCTATAGACATCACTCTTTTCAGTAATGT
CAATTGTATAAGCTAGTTCTGGAGCAA

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC000550A_C01 KMC000550A_c01
         (567 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_172468.2| leucine-rich repeat transmembrane protein kinas...   131  7e-30
gb|AAL12626.1| leucine-rich repeat receptor-like kinase F21M12.3...   127  1e-28
ref|NP_177363.1| leucine-rich repeat transmembrane protein kinas...   123  1e-27
dbj|BAC06203.1| putative receptor protein kinase [Oryza sativa (...   115  3e-25
ref|NP_199777.1| receptor protein kinase; protein id: At5g49660....   113  2e-24

>ref|NP_172468.2| leucine-rich repeat transmembrane protein kinase, putative; protein
            id: At1g09970.1, supported by cDNA: gi_17065207
            [Arabidopsis thaliana] gi|17065208|gb|AAL32758.1| Unknown
            protein [Arabidopsis thaliana]
          Length = 976

 Score =  131 bits (329), Expect = 7e-30
 Identities = 62/109 (56%), Positives = 80/109 (72%)
 Frame = -3

Query: 565  APELAYTIDITEKSDVYSFGVVLLELVSGRKPIEEEYGEAKDIVYWVLTHLNDHESILNI 386
            APE  Y   +TEK DVYSFGVVL+ELV+G+KPIE E+GE+KDIV WV  +L   ES++ I
Sbjct: 851  APEYGYASKVTEKCDVYSFGVVLMELVTGKKPIEAEFGESKDIVNWVSNNLKSKESVMEI 910

Query: 385  LDDRVALECGEDMIKVLKIAIKCTTKLPSLRPTMREVINMLIGAEPCTL 239
            +D ++     ED +K+L+IAI CT +LP LRPTMR V+ M+  AEPC L
Sbjct: 911  VDKKIGEMYREDAVKMLRIAIICTARLPGLRPTMRSVVQMIEDAEPCRL 959

>gb|AAL12626.1| leucine-rich repeat receptor-like kinase F21M12.36 [Arabidopsis
            thaliana]
          Length = 977

 Score =  127 bits (318), Expect = 1e-28
 Identities = 60/107 (56%), Positives = 78/107 (72%)
 Frame = -3

Query: 559  ELAYTIDITEKSDVYSFGVVLLELVSGRKPIEEEYGEAKDIVYWVLTHLNDHESILNILD 380
            E  Y   +TEK DVYSFGVVL+ELV+G+KPIE E+GE+KDIV WV  +L   ES++ I+D
Sbjct: 854  EYGYASKVTEKCDVYSFGVVLMELVTGKKPIEAEFGESKDIVNWVSNNLKSKESVMEIVD 913

Query: 379  DRVALECGEDMIKVLKIAIKCTTKLPSLRPTMREVINMLIGAEPCTL 239
             ++     ED +K+L+IAI CT +LP LRPTMR V+ M+  AEPC L
Sbjct: 914  KKIGEMYREDAVKMLRIAIICTARLPGLRPTMRSVVQMIEDAEPCRL 960

>ref|NP_177363.1| leucine-rich repeat transmembrane protein kinase, putative; protein
            id: At1g72180.1 [Arabidopsis thaliana]
            gi|25406152|pir||C96745 hypothetical protein T9N14.3
            [imported] - Arabidopsis thaliana
            gi|12323667|gb|AAG51800.1|AC067754_16 leucine-rich
            receptor-like protein kinase, putative; 28019-31149
            [Arabidopsis thaliana]
          Length = 977

 Score =  123 bits (309), Expect = 1e-27
 Identities = 64/115 (55%), Positives = 85/115 (73%), Gaps = 2/115 (1%)
 Frame = -3

Query: 565  APELAYTIDITEKSDVYSFGVVLLELVSGRKPIEEEYGEAKDIVYWVLTHL-NDHESILN 389
            APELAY+   TEKSDVYSFGVVLLELV+G +P+E+E+GE KDIV +V + +  D  ++ N
Sbjct: 856  APELAYSFKATEKSDVYSFGVVLLELVTGLRPMEDEFGEGKDIVDYVYSQIQQDPRNLQN 915

Query: 388  ILDDRV-ALECGEDMIKVLKIAIKCTTKLPSLRPTMREVINMLIGAEPCTLKSSD 227
            +LD +V +    E MI+VLK+ + CTTKLP+LRP+MREV+  L  A+PC   S D
Sbjct: 916  VLDKQVLSTYIEESMIRVLKMGLLCTTKLPNLRPSMREVVRKLDDADPCVSNSQD 970

>dbj|BAC06203.1| putative receptor protein kinase [Oryza sativa (japonica
            cultivar-group)] gi|22202670|dbj|BAC07328.1| putative
            receptor protein kinase [Oryza sativa (japonica
            cultivar-group)]
          Length = 964

 Score =  115 bits (289), Expect = 3e-25
 Identities = 58/102 (56%), Positives = 77/102 (74%)
 Frame = -3

Query: 565  APELAYTIDITEKSDVYSFGVVLLELVSGRKPIEEEYGEAKDIVYWVLTHLNDHESILNI 386
            APELAY++ +TEKSDVYSFG+VLLEL++GR P ++++    DIV WV +HL  +++   +
Sbjct: 846  APELAYSLKVTEKSDVYSFGIVLLELLTGRSPSDQQFDGELDIVSWVSSHL-ANQNPAAV 904

Query: 385  LDDRVALECGEDMIKVLKIAIKCTTKLPSLRPTMREVINMLI 260
            LD +V+    EDM KVL IAI CT +LPS RPTMREV+ MLI
Sbjct: 905  LDPKVSSHASEDMTKVLNIAILCTVQLPSERPTMREVVKMLI 946

>ref|NP_199777.1| receptor protein kinase; protein id: At5g49660.1 [Arabidopsis
            thaliana]
          Length = 966

 Score =  113 bits (282), Expect = 2e-24
 Identities = 52/106 (49%), Positives = 76/106 (71%)
 Frame = -3

Query: 565  APELAYTIDITEKSDVYSFGVVLLELVSGRKPIEEEYGEAKDIVYWVLTHLNDHESILNI 386
            APE AY+   T K DVYSFGVVL+EL++G+KP++  +GE K+IV WV T ++  E ++  
Sbjct: 833  APEYAYSSKATIKCDVYSFGVVLMELITGKKPVDSCFGENKNIVNWVSTKIDTKEGLIET 892

Query: 385  LDDRVALECGEDMIKVLKIAIKCTTKLPSLRPTMREVINMLIGAEP 248
            LD R++     DMI  L++AI+CT++ P++RPTM EV+ +LI A P
Sbjct: 893  LDKRLSESSKADMINALRVAIRCTSRTPTIRPTMNEVVQLLIDATP 938

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 412,034,744
Number of Sequences: 1393205
Number of extensions: 7808046
Number of successful extensions: 23118
Number of sequences better than 10.0: 2520
Number of HSP's better than 10.0 without gapping: 21615
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22328
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20669577624
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 SPDL044d07_f BP054767 1 547 2 MPDL058a10_f AV779423 15 548 3 SPDL061a03_f BP055783 16 355 4 MPDL074f01_f AV780317 16 551 5 GENLf022g10 BP063529 16 487 6 MPDL074e02_f AV780312 16 551 7 MPDL032g05_f AV778095 16 576 8 SPDL086b01_f BP057375 17 476 9 SPDL093d05_f BP057832 18 587 10 SPDL033h08_f BP054091 19 518 11 SPDL033g10_f BP054083 19 557 12 MPDL060g12_f AV779572 19 575 13 MPDL009e05_f AV776982 28 403 14 MRL025e07_f BP085004 31 392 15 SPDL046e11_f BP054890 34 458

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