Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000537A_C01 KMC000537A_c01
(714 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||A84690 hypothetical protein At2g28880 [imported] - Arabidop... 165 7e-40
ref|NP_180454.2| putative para-aminobenzoate synthase and glutam... 165 7e-40
gb|ZP_00111643.1| hypothetical protein [Nostoc punctiforme] 117 1e-25
ref|NP_487483.1| p-aminobenzoic acid synthase [Nostoc sp. PCC 71... 117 2e-25
gb|ZP_00057882.1| hypothetical protein [Thermobifida fusca] 116 4e-25
>pir||A84690 hypothetical protein At2g28880 [imported] - Arabidopsis thaliana
gi|3927835|gb|AAC79592.1| putative para-aminobenzoate
synthase and glutamine amidotransferase, a bifunctional
enzyme [Arabidopsis thaliana]
Length = 917
Score = 165 bits (417), Expect = 7e-40
Identities = 78/98 (79%), Positives = 92/98 (93%)
Frame = -2
Query: 713 DCVKAAFPGGSMTGAPKLRSMELLDSLESCSRGIYSGCIGFFSYNQTFDLNIVIRTVVIH 534
+CV+AAFPGGSMTGAPKLRS+E+LDSLE+CSRG+YSG IG+FSYN TFDLNIVIRTV+IH
Sbjct: 812 ECVRAAFPGGSMTGAPKLRSVEILDSLENCSRGLYSGSIGYFSYNGTFDLNIVIRTVIIH 871
Query: 533 EGEASIGAGGAIIALSNPENEYEEMILKTKAPRKAVTD 420
E EASIGAGGAI+ALS+PE+E+EEMILKT+AP AV +
Sbjct: 872 EDEASIGAGGAIVALSSPEDEFEEMILKTRAPANAVME 909
>ref|NP_180454.2| putative para-aminobenzoate synthase and glutamine amidotransferase,
a bifunctional enzyme; protein id: At2g28880.1, supported
by cDNA: gi_20466064 [Arabidopsis thaliana]
gi|20466065|gb|AAM19955.1| At2g28880/F8N16.17
[Arabidopsis thaliana] gi|27363398|gb|AAO11618.1|
At2g28880/F8N16.17 [Arabidopsis thaliana]
Length = 919
Score = 165 bits (417), Expect = 7e-40
Identities = 78/98 (79%), Positives = 92/98 (93%)
Frame = -2
Query: 713 DCVKAAFPGGSMTGAPKLRSMELLDSLESCSRGIYSGCIGFFSYNQTFDLNIVIRTVVIH 534
+CV+AAFPGGSMTGAPKLRS+E+LDSLE+CSRG+YSG IG+FSYN TFDLNIVIRTV+IH
Sbjct: 814 ECVRAAFPGGSMTGAPKLRSVEILDSLENCSRGLYSGSIGYFSYNGTFDLNIVIRTVIIH 873
Query: 533 EGEASIGAGGAIIALSNPENEYEEMILKTKAPRKAVTD 420
E EASIGAGGAI+ALS+PE+E+EEMILKT+AP AV +
Sbjct: 874 EDEASIGAGGAIVALSSPEDEFEEMILKTRAPANAVME 911
>gb|ZP_00111643.1| hypothetical protein [Nostoc punctiforme]
Length = 741
Score = 117 bits (294), Expect = 1e-25
Identities = 55/91 (60%), Positives = 71/91 (77%)
Frame = -2
Query: 713 DCVKAAFPGGSMTGAPKLRSMELLDSLESCSRGIYSGCIGFFSYNQTFDLNIVIRTVVIH 534
DC++ AFPGGSMTGAPKLR++E++D LE +RG+YSG IGF N + DLNIVIRT V+
Sbjct: 612 DCIRNAFPGGSMTGAPKLRTLEIIDRLEQEARGVYSGAIGFLGLNGSADLNIVIRTAVLT 671
Query: 533 EGEASIGAGGAIIALSNPENEYEEMILKTKA 441
+ SIG GG I+ALS+PE E++E +LK KA
Sbjct: 672 PEQTSIGIGGGIVALSDPEMEFQETLLKAKA 702
>ref|NP_487483.1| p-aminobenzoic acid synthase [Nostoc sp. PCC 7120]
gi|25291359|pir||AD2236 p-aminobenzoic acid synthase
[imported] - Nostoc sp. (strain PCC 7120)
gi|17132576|dbj|BAB75142.1| p-aminobenzoic acid synthase
[Nostoc sp. PCC 7120]
Length = 714
Score = 117 bits (293), Expect = 2e-25
Identities = 56/91 (61%), Positives = 69/91 (75%)
Frame = -2
Query: 713 DCVKAAFPGGSMTGAPKLRSMELLDSLESCSRGIYSGCIGFFSYNQTFDLNIVIRTVVIH 534
DC++ AFPGGSMTGAPKLR+ME++D LE +RG+YSG IGF N T DLNIVIRT V+
Sbjct: 595 DCIRLAFPGGSMTGAPKLRTMEIIDQLEQEARGVYSGAIGFLGVNGTADLNIVIRTAVLT 654
Query: 533 EGEASIGAGGAIIALSNPENEYEEMILKTKA 441
+ SIG GG I+ALS+ E E++E ILK A
Sbjct: 655 PNQTSIGIGGGIVALSDVEMEFQETILKANA 685
>gb|ZP_00057882.1| hypothetical protein [Thermobifida fusca]
Length = 700
Score = 116 bits (290), Expect = 4e-25
Identities = 52/96 (54%), Positives = 73/96 (75%)
Frame = -2
Query: 713 DCVKAAFPGGSMTGAPKLRSMELLDSLESCSRGIYSGCIGFFSYNQTFDLNIVIRTVVIH 534
D V A FP GSMTGAPK R+ME++D LE+ +RG+YSG +G+ S++ T DL++VIRT V H
Sbjct: 603 DAVAACFPPGSMTGAPKKRTMEIVDRLETSARGVYSGALGYLSFSGTADLSVVIRTAVCH 662
Query: 533 EGEASIGAGGAIIALSNPENEYEEMILKTKAPRKAV 426
+G+ ++GAGGA++ S PE EY EM+LK P +A+
Sbjct: 663 DGQVTVGAGGAVVLESVPEREYAEMLLKAAVPLRAL 698
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 539,561,255
Number of Sequences: 1393205
Number of extensions: 10373610
Number of successful extensions: 21934
Number of sequences better than 10.0: 446
Number of HSP's better than 10.0 without gapping: 21234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21862
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 32936043699
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
