Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000519A_C01 KMC000519A_c01
(645 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_191707.1| putative protein; protein id: At3g61480.1 [Arab... 92 5e-18
ref|NP_568507.1| putative protein; protein id: At5g28350.1, supp... 92 8e-18
gb|AAF88009.1| contains similarity to Drosophila melanogaster Bc... 92 8e-18
>ref|NP_191707.1| putative protein; protein id: At3g61480.1 [Arabidopsis thaliana]
gi|11290118|pir||T47940 hypothetical protein F2A19.80 -
Arabidopsis thaliana gi|6850839|emb|CAB71078.1| putative
protein [Arabidopsis thaliana]
Length = 1100
Score = 92.4 bits (228), Expect = 5e-18
Identities = 42/64 (65%), Positives = 55/64 (85%)
Frame = -1
Query: 645 KFKEWIVVLATLLRRSEVLFDLFRHDVRLWKAYHTTLQSHPSFTEYQDLVEDLEEKLASF 466
KFKEWIVVLATLL+RSEVL+D+FR+D+RLWKAY TL+SH +F +Y DL++ LE KL++
Sbjct: 1030 KFKEWIVVLATLLQRSEVLYDIFRYDLRLWKAYSVTLESHLAFAQYHDLLQILEAKLSAT 1089
Query: 465 TNEE 454
+ EE
Sbjct: 1090 SREE 1093
>ref|NP_568507.1| putative protein; protein id: At5g28350.1, supported by cDNA:
gi_14532655 [Arabidopsis thaliana]
Length = 534
Score = 91.7 bits (226), Expect = 8e-18
Identities = 42/64 (65%), Positives = 54/64 (83%)
Frame = -1
Query: 645 KFKEWIVVLATLLRRSEVLFDLFRHDVRLWKAYHTTLQSHPSFTEYQDLVEDLEEKLASF 466
KFKEWIVVLATLL+RSEVL+D+FR+D+RLWKAY TL+SH +F Y DL++ LE KL++
Sbjct: 464 KFKEWIVVLATLLQRSEVLYDIFRYDLRLWKAYSVTLESHLAFAHYHDLLQILEAKLSAT 523
Query: 465 TNEE 454
+ EE
Sbjct: 524 SREE 527
>gb|AAF88009.1| contains similarity to Drosophila melanogaster BcDNA.GH03694
(GB:AAD55412) [Arabidopsis thaliana]
Length = 1017
Score = 91.7 bits (226), Expect = 8e-18
Identities = 42/64 (65%), Positives = 54/64 (83%)
Frame = -1
Query: 645 KFKEWIVVLATLLRRSEVLFDLFRHDVRLWKAYHTTLQSHPSFTEYQDLVEDLEEKLASF 466
KFKEWIVVLATLL+RSEVL+D+FR+D+RLWKAY TL+SH +F Y DL++ LE KL++
Sbjct: 947 KFKEWIVVLATLLQRSEVLYDIFRYDLRLWKAYSVTLESHLAFAHYHDLLQILEAKLSAT 1006
Query: 465 TNEE 454
+ EE
Sbjct: 1007 SREE 1010
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 545,863,656
Number of Sequences: 1393205
Number of extensions: 11930499
Number of successful extensions: 25552
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 24923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25548
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27291941472
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
