Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000512A_C01 KMC000512A_c01
(580 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_179531.1| putative protein kinase; protein id: At2g19410.... 110 1e-23
ref|NP_680448.1| similar to putative protein kinase; protein id:... 107 1e-22
ref|NP_182115.1| putative protein kinase; protein id: At2g45910.... 94 9e-19
gb|AAO00872.1| putative protein kinase [Arabidopsis thaliana] 94 9e-19
ref|NP_201353.1| putative protein; protein id: At5g65500.1 [Arab... 90 2e-17
>ref|NP_179531.1| putative protein kinase; protein id: At2g19410.1 [Arabidopsis
thaliana] gi|7486244|pir||T01289 probable protein kinase
At2g19410 [imported] - Arabidopsis thaliana
gi|20197009|gb|AAM14871.1| putative protein kinase
[Arabidopsis thaliana]
Length = 801
Score = 110 bits (276), Expect = 1e-23
Identities = 50/72 (69%), Positives = 60/72 (82%)
Frame = -1
Query: 559 SSTCTPSPYYCPILQAIMDEPHIAADGFTYEYRAIKAWLSKHNVSPVTKVKLQHSELTPN 380
S+ PS Y+CPIL+ IM+EP IAADGFTYE +AI AWL KHN+SPVT+ KL H +LTPN
Sbjct: 721 SNLRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHNISPVTRQKLDHFKLTPN 780
Query: 379 HTLRSAIQEWKS 344
HTLRSAI++WKS
Sbjct: 781 HTLRSAIRDWKS 792
>ref|NP_680448.1| similar to putative protein kinase; protein id: At5g57035.1
[Arabidopsis thaliana]
Length = 786
Score = 107 bits (266), Expect = 1e-22
Identities = 49/77 (63%), Positives = 64/77 (82%), Gaps = 1/77 (1%)
Frame = -1
Query: 571 KMGRSSTCTPSPYYCPILQAIMDEPHIAADGFTYEYRAIKAWLSKH-NVSPVTKVKLQHS 395
K +++ P+ YYCPIL+ IM++P IAADGFTYE +AIK W+ KH +VSPVTK +L+HS
Sbjct: 697 KTEQANARAPTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHS 756
Query: 394 ELTPNHTLRSAIQEWKS 344
+LTPNHTLRSAI+EW+S
Sbjct: 757 DLTPNHTLRSAIREWRS 773
>ref|NP_182115.1| putative protein kinase; protein id: At2g45910.1 [Arabidopsis
thaliana] gi|7488259|pir||T02456 protein kinase homolog
F4I18.11 - Arabidopsis thaliana
gi|3386604|gb|AAC28534.1| putative protein kinase
[Arabidopsis thaliana]
Length = 799
Score = 94.4 bits (233), Expect = 9e-19
Identities = 45/79 (56%), Positives = 57/79 (71%), Gaps = 2/79 (2%)
Frame = -1
Query: 580 ASEKMGRSSTCTPSPYY-CPILQAIMDEPHIAADGFTYEYRAIKAWL-SKHNVSPVTKVK 407
+S +GR+ PY+ CPI Q +M +PH+AADGFTYE AI+AWL S+H+ SP+T VK
Sbjct: 716 SSFHLGRNEHRIAPPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVK 775
Query: 406 LQHSELTPNHTLRSAIQEW 350
L H+ L NH LRSAIQEW
Sbjct: 776 LSHTSLIANHALRSAIQEW 794
>gb|AAO00872.1| putative protein kinase [Arabidopsis thaliana]
Length = 834
Score = 94.4 bits (233), Expect = 9e-19
Identities = 45/79 (56%), Positives = 57/79 (71%), Gaps = 2/79 (2%)
Frame = -1
Query: 580 ASEKMGRSSTCTPSPYY-CPILQAIMDEPHIAADGFTYEYRAIKAWL-SKHNVSPVTKVK 407
+S +GR+ PY+ CPI Q +M +PH+AADGFTYE AI+AWL S+H+ SP+T VK
Sbjct: 751 SSFHLGRNEHRIAPPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVK 810
Query: 406 LQHSELTPNHTLRSAIQEW 350
L H+ L NH LRSAIQEW
Sbjct: 811 LSHTSLIANHALRSAIQEW 829
>ref|NP_201353.1| putative protein; protein id: At5g65500.1 [Arabidopsis thaliana]
Length = 765
Score = 89.7 bits (221), Expect = 2e-17
Identities = 40/68 (58%), Positives = 51/68 (74%), Gaps = 1/68 (1%)
Frame = -1
Query: 544 PSPYYCPILQAIMDEPHIAADGFTYEYRAIKAWLSK-HNVSPVTKVKLQHSELTPNHTLR 368
PS + CPILQ +M PH+AADGF+YE AI+ WLS H+ SP+T ++L + LTPNHTLR
Sbjct: 690 PSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNHTLR 749
Query: 367 SAIQEWKS 344
S IQ+W S
Sbjct: 750 SLIQDWHS 757
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 483,643,205
Number of Sequences: 1393205
Number of extensions: 9787224
Number of successful extensions: 26708
Number of sequences better than 10.0: 167
Number of HSP's better than 10.0 without gapping: 25532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26575
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21426319650
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
