Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000510A_C01 KMC000510A_c01
(428 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_194650.1| gamma-glutamyltransferase-like protein; protein... 114 3e-25
dbj|BAB03616.1| putative gamma-glutamyltransferase [Oryza sativa... 91 3e-18
dbj|BAB03615.1| putative gamma-glutamyltransferase [Oryza sativa... 86 8e-17
dbj|BAC56855.1| gamma-glutamyl transferase [Raphanus sativus] 86 8e-17
ref|NP_195674.2| putative gamma-glutamyltransferase; protein id:... 82 2e-15
>ref|NP_194650.1| gamma-glutamyltransferase-like protein; protein id: At4g29210.1
[Arabidopsis thaliana] gi|7484969|pir||T13432
gamma-glutamyltransferase homolog T17A13.30 -
Arabidopsis thaliana gi|7269819|emb|CAB79679.1|
gamma-glutamyltransferase-like protein [Arabidopsis
thaliana] gi|28973684|gb|AAO64159.1| putative
gamma-glutamyltransferase [Arabidopsis thaliana]
Length = 637
Score = 114 bits (285), Expect = 3e-25
Identities = 65/120 (54%), Positives = 83/120 (69%), Gaps = 6/120 (5%)
Frame = -2
Query: 427 VFLDHFILGMKPLDAVLRPRIYPQLIPNVVSYEHLPAYNGDHIGLAEESRHFLEERGHEL 248
VFL+ F+L MKP +AV RIY +LIPNVVSYE+ NGDHIG++E+++ FL ERGHEL
Sbjct: 520 VFLNCFVLNMKPKEAVESARIYHRLIPNVVSYENFTTINGDHIGVSEDTKMFLAERGHEL 579
Query: 247 CECAVKAVTQLIVQTL------DTPI*LNRKTGEKTNSHGMHGILTAVSDPRKGGCPAAV 86
E + A+ QLIVQ+ + I + RK G+K S + G+LTAVSDPRK G PAAV
Sbjct: 580 KELSGGAIVQLIVQSFKEEKEEEMIIEIGRKIGKK--SKPLKGLLTAVSDPRKDGKPAAV 637
>dbj|BAB03616.1| putative gamma-glutamyltransferase [Oryza sativa (japonica
cultivar-group)]
Length = 582
Score = 90.9 bits (224), Expect = 3e-18
Identities = 53/114 (46%), Positives = 68/114 (59%)
Frame = -2
Query: 427 VFLDHFILGMKPLDAVLRPRIYPQLIPNVVSYEHLPAYNGDHIGLAEESRHFLEERGHEL 248
VF++HFI+GM PL AVL PR L+PN V YE++ +G+ L+ E+R FL RGH L
Sbjct: 479 VFVNHFIVGMHPLAAVLNPR----LVPNEVVYENVTVVDGEVFELSGEAREFLRRRGHRL 534
Query: 247 CECAVKAVTQLIVQTLDTPI*LNRKTGEKTNSHGMHGILTAVSDPRKGGCPAAV 86
AV Q IVQ L TP+ + + HG+LTAVSDPRK G PA +
Sbjct: 535 TSTDSGAVCQFIVQDLLTPV------AAAGDENVFHGMLTAVSDPRKDGRPAGM 582
>dbj|BAB03615.1| putative gamma-glutamyltransferase [Oryza sativa (japonica
cultivar-group)]
Length = 641
Score = 86.3 bits (212), Expect = 8e-17
Identities = 51/114 (44%), Positives = 64/114 (55%)
Frame = -2
Query: 427 VFLDHFILGMKPLDAVLRPRIYPQLIPNVVSYEHLPAYNGDHIGLAEESRHFLEERGHEL 248
VF++HFI+GM PL A L+PNVV YE+ G+ I L+ E+R FL RGH L
Sbjct: 537 VFVNHFIVGMHPLAA---------LVPNVVVYENETVVGGEVIELSGEAREFLRRRGHRL 587
Query: 247 CECAVKAVTQLIVQTLDTPI*LNRKTGEKTNSHGMHGILTAVSDPRKGGCPAAV 86
AV Q IVQ L P+ + + HG+LTAVSDPRKGG PA +
Sbjct: 588 RSTGSGAVCQFIVQDLLAPVGSAADRRQHGGGNVFHGMLTAVSDPRKGGRPAGM 641
>dbj|BAC56855.1| gamma-glutamyl transferase [Raphanus sativus]
Length = 575
Score = 86.3 bits (212), Expect = 8e-17
Identities = 52/112 (46%), Positives = 64/112 (56%)
Frame = -2
Query: 427 VFLDHFILGMKPLDAVLRPRIYPQLIPNVVSYEHLPAYNGDHIGLAEESRHFLEERGHEL 248
VFL+HF L M PL +VL PRIY QLIPN VS+E+ DH + +E+R LE++GH L
Sbjct: 475 VFLNHFFLNMDPLSSVLAPRIYHQLIPNRVSFENWTTVFSDHFEVPKETRVVLEKKGHVL 534
Query: 247 CECAVKAVTQLIVQTLDTPI*LNRKTGEKTNSHGMHGILTAVSDPRKGGCPA 92
A + Q IVQ D N+ GM L AVSDPRKGG P+
Sbjct: 535 TPIAGGTIAQFIVQESD------------RNAGGM-SKLVAVSDPRKGGFPS 573
>ref|NP_195674.2| putative gamma-glutamyltransferase; protein id: At4g39640.1,
supported by cDNA: gi_17978921 [Arabidopsis thaliana]
gi|17978922|gb|AAL47428.1| AT4g39640/T19P19_30
[Arabidopsis thaliana] gi|23308189|gb|AAN18064.1|
At4g39640/T19P19_30 [Arabidopsis thaliana]
Length = 572
Score = 82.0 bits (201), Expect = 2e-15
Identities = 48/112 (42%), Positives = 60/112 (52%)
Frame = -2
Query: 427 VFLDHFILGMKPLDAVLRPRIYPQLIPNVVSYEHLPAYNGDHIGLAEESRHFLEERGHEL 248
V+L+HF L M PL +VL PRIY QLIPN SYE+ DH + + +R LE++GH L
Sbjct: 472 VYLNHFFLKMDPLSSVLAPRIYHQLIPNRASYENWTTVFNDHFEIPKATRVVLEKKGHVL 531
Query: 247 CECAVKAVTQLIVQTLDTPI*LNRKTGEKTNSHGMHGILTAVSDPRKGGCPA 92
A + Q IVQ E + G L AVSDPRKGG P+
Sbjct: 532 SPIAGGTIAQFIVQ-------------ESGENSGGRSELVAVSDPRKGGFPS 570
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 362,805,050
Number of Sequences: 1393205
Number of extensions: 7060454
Number of successful extensions: 14471
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 14229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14446
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 6822985368
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
