Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000506A_C06 KMC000506A_c06
(2176 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06827 lipoxygenase (EC 1.13.11.12) - garden pea gi|2459611... 571 0.0
pir||T06429 lipoxygenase (EC 1.13.11.12) vlxC - soybean gi|12624... 564 0.0
sp|P24095|LOXX_SOYBN Seed lipoxygenase gi|99932|pir||S13381 lipo... 547 0.0
pir||T06454 probable lipoxygenase (EC 1.13.11.12) - garden pea g... 548 0.0
gb|AAA03728.1| lipoxygenase 542 0.0
>pir||T06827 lipoxygenase (EC 1.13.11.12) - garden pea gi|2459611|gb|AAB71759.1|
lipoxygenase [Pisum sativum]
Length = 868
Score = 571 bits (1472), Expect(4) = 0.0
Identities = 283/373 (75%), Positives = 320/373 (84%), Gaps = 7/373 (1%)
Frame = -3
Query: 2087 LARPTLGGSANYPYPRRVRTGRQPTRKDPTCEKPAVQLYVPRDENFGHLKSSDFLGYGIK 1908
LARP LGGS+ +PYPRRVR+GR+PTRKDP EKP +YVPRDENFGHLKSSDFL +GIK
Sbjct: 231 LARPVLGGSSTFPYPRRVRSGRKPTRKDPKSEKPGA-IYVPRDENFGHLKSSDFLMFGIK 289
Query: 1907 SVSHDLIPAFKSLIFDLSITKSEFDSFDEVRDLFEGGIWLPTDLLRTISPLPVLSAVLPS 1728
S+SHD++P F+S+IFDL+ T +EFDSFDEVR L+EGGI LPTD++ ISPLP L + +
Sbjct: 290 SLSHDVLPLFQSVIFDLNFTPNEFDSFDEVRGLYEGGIKLPTDIISKISPLPALKEIFRT 349
Query: 1727 EGENVLTFPKPHVIQVSKSAWMTDEEFGREMIAGVNPNVICRLQEFPPRSNLDVAIYGDR 1548
+GE VL FP PHVI+VSKSAWMTDEEFGRE++AGVNP VI LQEFPP+S+LD IYGD+
Sbjct: 350 DGEQVLKFPPPHVIKVSKSAWMTDEEFGREILAGVNPCVIRLLQEFPPKSSLDATIYGDQ 409
Query: 1547 TSRITKENLEINLGGLTVEEALGAQRLFILDYHDVFLPYVERINKIKKAYATRTILFLKD 1368
+S ITKE+LE NLGGLTVEEAL +RLF+LDYHD F+PY+ERIN KAYATRTILFLKD
Sbjct: 410 SSTITKEHLETNLGGLTVEEALNGKRLFLLDYHDAFMPYLERINISAKAYATRTILFLKD 469
Query: 1367 DGALTPLAIELSLPDS-------ESKVILPANEGVESTIWLLAKAYVIVNDSCYHQLMSH 1209
DG L PLAIELSLP S ESKV LPA EGVESTIWLLAKA+V+VNDS YHQLMSH
Sbjct: 470 DGTLKPLAIELSLPHSNGIQYGAESKVFLPAEEGVESTIWLLAKAHVVVNDSSYHQLMSH 529
Query: 1208 WLNTHAVMEPFVIATNRHLSVLHPIYKLLHPHYRDTININGLARESLINAGGIIEQSVCP 1029
WLNTHAVMEPF+IATNRHLSVLHPI KLL+PHYRDTININGLAR+SLINAGGIIEQS P
Sbjct: 530 WLNTHAVMEPFIIATNRHLSVLHPINKLLYPHYRDTININGLARQSLINAGGIIEQSFLP 589
Query: 1028 GPNSIEMSSAVYK 990
GPNSIE+SS VYK
Sbjct: 590 GPNSIEISSTVYK 602
Score = 471 bits (1213), Expect(4) = 0.0
Identities = 215/267 (80%), Positives = 246/267 (91%)
Frame = -1
Query: 991 RDWVFTDQALPADLIKRGMAVEDPSAPHGVRLVVEDYPYAVDGLEIWDAITKWVQEYVSL 812
++WVFTDQALPADLIKRG+AVEDPS+PHG+RLV+EDYPYAVDGLEIWDAI WVQ+YVSL
Sbjct: 602 KNWVFTDQALPADLIKRGLAVEDPSSPHGLRLVIEDYPYAVDGLEIWDAIKAWVQDYVSL 661
Query: 811 YYPTDDAVKKDTELQTWWKEVVQRGHADLSDKPWWPKMQTLQELIKSCSIIIWTASALHA 632
YYPTDD V+KD ELQTWWKE V++GH DL DKPWWPKMQT+Q+L++SCSII+WTASALHA
Sbjct: 662 YYPTDDTVQKDIELQTWWKEAVEKGHGDLKDKPWWPKMQTVQDLVQSCSIIVWTASALHA 721
Query: 631 AVNFGQYPYGGLIINRPTISRRLIPEPGTPEYDEMVKSPQKAYLRTITPKYETLIDLTVI 452
AVNFGQYPYGG I+NRPT+SRR IPE GTPEYDEMVKSPQKAYLRTITPKY+TL+DL+VI
Sbjct: 722 AVNFGQYPYGGYILNRPTLSRRFIPEKGTPEYDEMVKSPQKAYLRTITPKYQTLVDLSVI 781
Query: 451 EILSRHASDEIYLGERENPEWTSDTKAKQAFQKFGSKLAEIEAKINGRNNDSSLKNRFGP 272
EILSRHASDE+YLGER+N WTSD++A QAF KFG+KL EIE KI+ RNN+ L+NR+GP
Sbjct: 782 EILSRHASDEVYLGERDNKNWTSDSRAVQAFAKFGTKLTEIEGKIHSRNNEPGLRNRYGP 841
Query: 271 AQLPYTLLLRSSKEGLTFRGIPNSISI 191
QLPYTLLLRSS+EGLTFR IPNS+SI
Sbjct: 842 VQLPYTLLLRSSEEGLTFRRIPNSVSI 868
Score = 25.4 bits (54), Expect(4) = 0.0
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 2118 ELGNPDGGDKFGSP 2077
+LGNPD GDK P
Sbjct: 221 DLGNPDSGDKLARP 234
Score = 25.0 bits (53), Expect(4) = 0.0
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 2143 IYDYDVYNGVG 2111
IYDYDVYN +G
Sbjct: 213 IYDYDVYNDLG 223
>pir||T06429 lipoxygenase (EC 1.13.11.12) vlxC - soybean gi|1262440|gb|AAA96817.1|
lipoxygenase
Length = 859
Score = 564 bits (1453), Expect(4) = 0.0
Identities = 280/366 (76%), Positives = 314/366 (85%), Gaps = 2/366 (0%)
Frame = -3
Query: 2081 RPTLGGSANYPYPRRVRTGRQPTRKDPTCEKPAVQLYVPRDENFGHLKSSDFLGYGIKSV 1902
RP +GGS+NYPYPRRVRTGR+ TRKDP EKP ++YVPRDENFGHLKSSDFL YGIKS+
Sbjct: 229 RPIIGGSSNYPYPRRVRTGREKTRKDPNSEKPG-EIYVPRDENFGHLKSSDFLTYGIKSL 287
Query: 1901 SHDLIPAFKSLIFDLSITKSEFDSFDEVRDLFEGGIWLPTDLLRTISPLPVLSAVLPSEG 1722
S ++IP FKS+I +L +T SEFDSFDEVR LFEGGI LPT++L ISPLPVL + ++G
Sbjct: 288 SQNVIPLFKSIILNLRVTSSEFDSFDEVRGLFEGGIKLPTNILSQISPLPVLKEIFRTDG 347
Query: 1721 ENVLTFPKPHVIQVSKSAWMTDEEFGREMIAGVNPNVICRLQEFPPRSNLDVAIYGDRTS 1542
EN L FP PHVI+VSKS WMTD+EF REMIAGVNPNVI RLQEFPP+S LD A YGD+TS
Sbjct: 348 ENTLQFPPPHVIRVSKSGWMTDDEFAREMIAGVNPNVIRRLQEFPPKSTLDPATYGDQTS 407
Query: 1541 RITKENLEINLGGLTVEEALGAQRLFILDYHDVFLPYVERINK--IKKAYATRTILFLKD 1368
ITK+ LEINLGG+TVEEA+ A RLFILDYHD F PY+ +IN I KAYATRTILFLKD
Sbjct: 408 TITKQQLEINLGGVTVEEAISAHRLFILDYHDAFFPYLTKINSLPIAKAYATRTILFLKD 467
Query: 1367 DGALTPLAIELSLPDSESKVILPANEGVESTIWLLAKAYVIVNDSCYHQLMSHWLNTHAV 1188
DG+L PLAIELS P + SKV+LPA EGVESTIWLLAKA+VIVNDS YHQL+SHWLNTHAV
Sbjct: 468 DGSLKPLAIELSKPATVSKVVLPATEGVESTIWLLAKAHVIVNDSGYHQLISHWLNTHAV 527
Query: 1187 MEPFVIATNRHLSVLHPIYKLLHPHYRDTININGLARESLINAGGIIEQSVCPGPNSIEM 1008
MEPF IATNRHLSVLHPIYKLL+PHY+DTININGLAR+SLINAGGIIEQ+ PG SIEM
Sbjct: 528 MEPFAIATNRHLSVLHPIYKLLYPHYKDTININGLARQSLINAGGIIEQTFLPGKYSIEM 587
Query: 1007 SSAVYK 990
SS VYK
Sbjct: 588 SSVVYK 593
Score = 459 bits (1181), Expect(4) = 0.0
Identities = 209/267 (78%), Positives = 246/267 (91%)
Frame = -1
Query: 991 RDWVFTDQALPADLIKRGMAVEDPSAPHGVRLVVEDYPYAVDGLEIWDAITKWVQEYVSL 812
++WVFTDQALPADL+KRG+AVEDPSAPHG+RLV+EDYPYAVDGLEIWDAI WV EYVS+
Sbjct: 593 KNWVFTDQALPADLVKRGLAVEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSV 652
Query: 811 YYPTDDAVKKDTELQTWWKEVVQRGHADLSDKPWWPKMQTLQELIKSCSIIIWTASALHA 632
YYPT+ A+++DTELQ WWKEVV++GH DL DKPWWPK+QT+++LI+SCSIIIWTASALHA
Sbjct: 653 YYPTNAAIQQDTELQAWWKEVVEKGHGDLKDKPWWPKLQTVEDLIQSCSIIIWTASALHA 712
Query: 631 AVNFGQYPYGGLIINRPTISRRLIPEPGTPEYDEMVKSPQKAYLRTITPKYETLIDLTVI 452
AVNFGQYPYGG I+NRPT++RR IPE GT EYDEMVK PQKAYLRTITPK+ETLID++VI
Sbjct: 713 AVNFGQYPYGGYIVNRPTLARRFIPEEGTKEYDEMVKDPQKAYLRTITPKFETLIDISVI 772
Query: 451 EILSRHASDEIYLGERENPEWTSDTKAKQAFQKFGSKLAEIEAKINGRNNDSSLKNRFGP 272
EILSRHASDE+YLG+R+NP WT+D+KA +AF+KFG+KLAEIE KI RNND SLK+R GP
Sbjct: 773 EILSRHASDEVYLGQRDNPNWTTDSKALEAFKKFGNKLAEIEGKITQRNNDPSLKSRHGP 832
Query: 271 AQLPYTLLLRSSKEGLTFRGIPNSISI 191
QLPYTLL RSS+EG++F+GIPNSISI
Sbjct: 833 VQLPYTLLHRSSEEGMSFKGIPNSISI 859
Score = 24.6 bits (52), Expect(4) = 0.0
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 2143 IYDYDVYNGVG 2111
IYDYD+YN +G
Sbjct: 211 IYDYDIYNDLG 221
Score = 23.5 bits (49), Expect(4) = 0.0
Identities = 8/9 (88%), Positives = 9/9 (99%)
Frame = -2
Query: 2118 ELGNPDGGD 2092
+LGNPDGGD
Sbjct: 219 DLGNPDGGD 227
>sp|P24095|LOXX_SOYBN Seed lipoxygenase gi|99932|pir||S13381 lipoxygenase (EC 1.13.11.12) -
soybean gi|18746|emb|CAA39604.1| lipoxygenase [Glycine
max]
Length = 864
Score = 547 bits (1409), Expect(4) = 0.0
Identities = 276/373 (73%), Positives = 309/373 (81%), Gaps = 9/373 (2%)
Frame = -3
Query: 2081 RPTLGGSANYPYPRRVRTGRQPTRKDPTCEKPAVQLYVPRDENFGHLKSSDFLGYGIKSV 1902
RP LGGS+ YPYPRRVRTGR+ TR DP EKP ++YVPRDENFGHLKSSDFL YGIKS+
Sbjct: 227 RPILGGSSIYPYPRRVRTGRERTRTDPNSEKPG-EVYVPRDENFGHLKSSDFLTYGIKSL 285
Query: 1901 SHDLIPAFKSLIFDLSITKSEFDSFDEVRDLFEGGIWLPTDLLRTISPLPVLSAVLPSEG 1722
SHD+IP FKS IF L +T SEF+SF++VR L+EGGI LPTD+L ISPLP L + ++G
Sbjct: 286 SHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDILSQISPLPALKEIFRTDG 345
Query: 1721 ENVLTFPKPHVIQVSKSAWMTDEEFGREMIAGVNPNVICRLQEFPPRSNLDVAIYGDRTS 1542
ENVL FP PHV +VSKS WMTDEEF RE+IAGVNPNVI RLQEFPP+S LD +YGD+TS
Sbjct: 346 ENVLQFPPPHVAKVSKSGWMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTS 405
Query: 1541 RITKENLEINLGGLTVEEALGAQRLFILDYHDVFLPYVERINKI--KKAYATRTILFLKD 1368
ITKE LEIN+GG+TVEEAL QRLFILDY D F+PY+ RIN + KAYATRTILFLKD
Sbjct: 406 TITKEQLEINMGGVTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKD 465
Query: 1367 DGALTPLAIELSLP-------DSESKVILPANEGVESTIWLLAKAYVIVNDSCYHQLMSH 1209
DG L PLAIELS P ES V+LPA EGV+STIWLLAKA+VIVNDS YHQL+SH
Sbjct: 466 DGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSH 525
Query: 1208 WLNTHAVMEPFVIATNRHLSVLHPIYKLLHPHYRDTININGLARESLINAGGIIEQSVCP 1029
WLNTHAVMEPF IATNRHLSVLHPIYKLL+PHYRDTININGLAR+SLINA GIIE+S P
Sbjct: 526 WLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLP 585
Query: 1028 GPNSIEMSSAVYK 990
G SIEMSS+VYK
Sbjct: 586 GKYSIEMSSSVYK 598
Score = 462 bits (1188), Expect(4) = 0.0
Identities = 213/267 (79%), Positives = 243/267 (90%)
Frame = -1
Query: 991 RDWVFTDQALPADLIKRGMAVEDPSAPHGVRLVVEDYPYAVDGLEIWDAITKWVQEYVSL 812
++WVFTDQALPADL+KRG+A+EDPSAPHG+RLV+EDYPYAVDGLEIWDAI WV EYVSL
Sbjct: 598 KNWVFTDQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSL 657
Query: 811 YYPTDDAVKKDTELQTWWKEVVQRGHADLSDKPWWPKMQTLQELIKSCSIIIWTASALHA 632
YYPTD AV++DTELQ WWKE V++GH DL +KPWWPKMQT ++LI+SCSII+WTASALHA
Sbjct: 658 YYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKMQTTEDLIQSCSIIVWTASALHA 717
Query: 631 AVNFGQYPYGGLIINRPTISRRLIPEPGTPEYDEMVKSPQKAYLRTITPKYETLIDLTVI 452
AVNFGQYPYGGLI+NRPT++RR IP GTPEYDEMVK+PQKAYLRTITPK+ETLIDL+VI
Sbjct: 718 AVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMVKNPQKAYLRTITPKFETLIDLSVI 777
Query: 451 EILSRHASDEIYLGERENPEWTSDTKAKQAFQKFGSKLAEIEAKINGRNNDSSLKNRFGP 272
EILSRHASDEIYLGERE P WT+D KA +AF++FGSKL IE KIN RN+D SL+NR GP
Sbjct: 778 EILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGP 837
Query: 271 AQLPYTLLLRSSKEGLTFRGIPNSISI 191
QLPYTLL RSS+EGLTF+GIPNSISI
Sbjct: 838 VQLPYTLLHRSSEEGLTFKGIPNSISI 864
Score = 25.0 bits (53), Expect(4) = 0.0
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 2143 IYDYDVYNGVG 2111
IYDYDVYN +G
Sbjct: 209 IYDYDVYNDLG 219
Score = 23.5 bits (49), Expect(4) = 0.0
Identities = 8/9 (88%), Positives = 9/9 (99%)
Frame = -2
Query: 2118 ELGNPDGGD 2092
+LGNPDGGD
Sbjct: 217 DLGNPDGGD 225
>pir||T06454 probable lipoxygenase (EC 1.13.11.12) - garden pea
gi|2598612|emb|CAA75609.1| lipoxygenase [Pisum sativum]
Length = 866
Score = 548 bits (1411), Expect(3) = 0.0
Identities = 275/374 (73%), Positives = 316/374 (83%), Gaps = 7/374 (1%)
Frame = -3
Query: 2090 SLARPTLGGSANYPYPRRVRTGRQPTRKDPTCEKPAVQLYVPRDENFGHLKSSDFLGYGI 1911
+LARP LGGS+ +PYPRRVR+GR+PT KDP EKP LYVPRDENFGHLKSSDFL YGI
Sbjct: 229 NLARPVLGGSSTHPYPRRVRSGRKPTTKDPKSEKPGA-LYVPRDENFGHLKSSDFLTYGI 287
Query: 1910 KSVSHDLIPAFKSLIFDLSITKSEFDSFDEVRDLFEGGIWLPTDLLRTISPLPVLSAVLP 1731
KS+S D+IP FKS+IFDL+ T +EFDSFDE LFEGGI LPT++L ISPLPVL +
Sbjct: 288 KSLSQDVIPLFKSVIFDLNFTPNEFDSFDEDA-LFEGGIELPTNVLSKISPLPVLKEIFR 346
Query: 1730 SEGENVLTFPKPHVIQVSKSAWMTDEEFGREMIAGVNPNVICRLQEFPPRSNLDVAIYGD 1551
++GE VL FP PHVI+VSKSAWMTDEEFGREMIAGVNP VI L+EFPP+S LD +YGD
Sbjct: 347 TDGEQVLKFPPPHVIKVSKSAWMTDEEFGREMIAGVNPCVIRLLKEFPPKSTLDTTLYGD 406
Query: 1550 RTSRITKENLEINLGGLTVEEALGAQRLFILDYHDVFLPYVERINKIKKAYATRTILFLK 1371
+TS I KE+LEINLGGLTVE+A+ QRLFILDYHD F+PY+ +INK KAYATRTILFLK
Sbjct: 407 QTSTIKKEHLEINLGGLTVEKAVNDQRLFILDYHDAFIPYLNKINKNAKAYATRTILFLK 466
Query: 1370 DDGALTPLAIELSLP-------DSESKVILPANEGVESTIWLLAKAYVIVNDSCYHQLMS 1212
DDG L PLAIELSLP +ESKVILP+++GV+STIWLL+KA+VIVNDSCYHQLMS
Sbjct: 467 DDGTLKPLAIELSLPHPSGLQYGAESKVILPSDQGVDSTIWLLSKAHVIVNDSCYHQLMS 526
Query: 1211 HWLNTHAVMEPFVIATNRHLSVLHPIYKLLHPHYRDTININGLARESLINAGGIIEQSVC 1032
HWLNTHAV+EPF+IATNRHLSVLHPI +LL PH+RDTININ LAR +LINA GIIEQ+
Sbjct: 527 HWLNTHAVVEPFIIATNRHLSVLHPINRLLDPHFRDTININSLARAALINADGIIEQTFL 586
Query: 1031 PGPNSIEMSSAVYK 990
PGP+S+EMSSA YK
Sbjct: 587 PGPSSVEMSSAAYK 600
Score = 454 bits (1167), Expect(3) = 0.0
Identities = 210/267 (78%), Positives = 245/267 (91%)
Frame = -1
Query: 991 RDWVFTDQALPADLIKRGMAVEDPSAPHGVRLVVEDYPYAVDGLEIWDAITKWVQEYVSL 812
++WVFTDQALPADLIKRG+AVED S+PHG+RLV+EDYPYAVDGLEIW AI WVQ+YVSL
Sbjct: 600 KNWVFTDQALPADLIKRGLAVEDSSSPHGLRLVIEDYPYAVDGLEIWYAIKIWVQDYVSL 659
Query: 811 YYPTDDAVKKDTELQTWWKEVVQRGHADLSDKPWWPKMQTLQELIKSCSIIIWTASALHA 632
YYPTD+ V+KDTELQTWWKE++++GH DL +KPWWP+MQ+LQ+LI+SCSIIIWTASALHA
Sbjct: 660 YYPTDEVVQKDTELQTWWKEIIEKGHGDLREKPWWPEMQSLQDLIQSCSIIIWTASALHA 719
Query: 631 AVNFGQYPYGGLIINRPTISRRLIPEPGTPEYDEMVKSPQKAYLRTITPKYETLIDLTVI 452
AVNFGQYPYGG I+NRPT+SRRLIPE GTP YDEMVK+PQKAYLRTITPK++TLIDL+VI
Sbjct: 720 AVNFGQYPYGGYILNRPTLSRRLIPEKGTPHYDEMVKNPQKAYLRTITPKFQTLIDLSVI 779
Query: 451 EILSRHASDEIYLGERENPEWTSDTKAKQAFQKFGSKLAEIEAKINGRNNDSSLKNRFGP 272
EILSRHASDEIYLGER++ WTSD++A QAF+KFG+KLA+IE I RNNDSSLKNR+GP
Sbjct: 780 EILSRHASDEIYLGERDSKFWTSDSRALQAFKKFGNKLAKIEGTIKERNNDSSLKNRYGP 839
Query: 271 AQLPYTLLLRSSKEGLTFRGIPNSISI 191
QLPYT+L S ++GL FRGIPNSISI
Sbjct: 840 VQLPYTILQPSGEDGLAFRGIPNSISI 866
Score = 25.0 bits (53), Expect(3) = 0.0
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 2143 IYDYDVYNGVG 2111
IYDYDVYN +G
Sbjct: 212 IYDYDVYNDLG 222
>gb|AAA03728.1| lipoxygenase
Length = 864
Score = 542 bits (1397), Expect(4) = 0.0
Identities = 274/373 (73%), Positives = 307/373 (81%), Gaps = 9/373 (2%)
Frame = -3
Query: 2081 RPTLGGSANYPYPRRVRTGRQPTRKDPTCEKPAVQLYVPRDENFGHLKSSDFLGYGIKSV 1902
RP LGG + YPYP RVRTGR+ TR DP EKP ++YVPRDENFGHLKSSDFL YGIKS+
Sbjct: 227 RPILGGCSIYPYPLRVRTGRERTRTDPNSEKPG-EVYVPRDENFGHLKSSDFLTYGIKSL 285
Query: 1901 SHDLIPAFKSLIFDLSITKSEFDSFDEVRDLFEGGIWLPTDLLRTISPLPVLSAVLPSEG 1722
SHD+IP FKS IF L +T SEF+SF++VR L+EGGI LPTD+L ISPLP L + ++G
Sbjct: 286 SHDVIPLFKSAIFQLRVTSSEFESFEDVRSLYEGGIKLPTDILSQISPLPALKEIFRTDG 345
Query: 1721 ENVLTFPKPHVIQVSKSAWMTDEEFGREMIAGVNPNVICRLQEFPPRSNLDVAIYGDRTS 1542
ENVL FP PHV +VSKS WMTDEEF RE+IAGVNPNVI RLQEFPP+S LD +YGD+TS
Sbjct: 346 ENVLQFPPPHVAKVSKSGWMTDEEFAREVIAGVNPNVIRRLQEFPPKSTLDPTLYGDQTS 405
Query: 1541 RITKENLEINLGGLTVEEALGAQRLFILDYHDVFLPYVERINKI--KKAYATRTILFLKD 1368
ITKE LEIN+GG+TVEEAL QRLFILDY D F+PY+ RIN + KAYATRTILFLKD
Sbjct: 406 TITKEQLEINMGGVTVEEALSTQRLFILDYQDAFIPYLTRINSLPTAKAYATRTILFLKD 465
Query: 1367 DGALTPLAIELSLP-------DSESKVILPANEGVESTIWLLAKAYVIVNDSCYHQLMSH 1209
DG L PLAIELS P ES V+LPA EGV+STIWLLAKA+VIVNDS YHQL+SH
Sbjct: 466 DGTLKPLAIELSKPHPDGDNLGPESIVVLPATEGVDSTIWLLAKAHVIVNDSGYHQLVSH 525
Query: 1208 WLNTHAVMEPFVIATNRHLSVLHPIYKLLHPHYRDTININGLARESLINAGGIIEQSVCP 1029
WLNTHAVMEPF IATNRHLSVLHPIYKLL+PHYRDTININGLAR+SLINA GIIE+S P
Sbjct: 526 WLNTHAVMEPFAIATNRHLSVLHPIYKLLYPHYRDTININGLARQSLINADGIIEKSFLP 585
Query: 1028 GPNSIEMSSAVYK 990
G SIEMSS+VYK
Sbjct: 586 GKYSIEMSSSVYK 598
Score = 457 bits (1175), Expect(4) = 0.0
Identities = 211/267 (79%), Positives = 241/267 (90%)
Frame = -1
Query: 991 RDWVFTDQALPADLIKRGMAVEDPSAPHGVRLVVEDYPYAVDGLEIWDAITKWVQEYVSL 812
++WVFT QALPADL+KRG+A+EDPSAPHG+RLV+EDYPYAVDGLEIWDAI WV EYVSL
Sbjct: 598 KNWVFTHQALPADLVKRGLAIEDPSAPHGLRLVIEDYPYAVDGLEIWDAIKTWVHEYVSL 657
Query: 811 YYPTDDAVKKDTELQTWWKEVVQRGHADLSDKPWWPKMQTLQELIKSCSIIIWTASALHA 632
YYPTD AV++DTELQ WWKE V++GH DL +KPWWPK QT ++LI+SCSII+WTASALHA
Sbjct: 658 YYPTDAAVQQDTELQAWWKEAVEKGHGDLKEKPWWPKKQTTEDLIQSCSIIVWTASALHA 717
Query: 631 AVNFGQYPYGGLIINRPTISRRLIPEPGTPEYDEMVKSPQKAYLRTITPKYETLIDLTVI 452
AVNFGQYPYGGLI+NRPT++RR IP GTPEYDEMVK+PQKAYLRTITPK+ETLIDL+VI
Sbjct: 718 AVNFGQYPYGGLILNRPTLARRFIPAEGTPEYDEMVKNPQKAYLRTITPKFETLIDLSVI 777
Query: 451 EILSRHASDEIYLGERENPEWTSDTKAKQAFQKFGSKLAEIEAKINGRNNDSSLKNRFGP 272
EILSRHASDEIYLGERE P WT+D KA +AF++FGSKL IE KIN RN+D SL+NR GP
Sbjct: 778 EILSRHASDEIYLGERETPNWTTDKKALEAFKRFGSKLTGIEGKINARNSDPSLRNRTGP 837
Query: 271 AQLPYTLLLRSSKEGLTFRGIPNSISI 191
QLPYTLL RSS+EGLTF+GIPNSISI
Sbjct: 838 VQLPYTLLHRSSEEGLTFKGIPNSISI 864
Score = 25.0 bits (53), Expect(4) = 0.0
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 2143 IYDYDVYNGVG 2111
IYDYDVYN +G
Sbjct: 209 IYDYDVYNDLG 219
Score = 23.5 bits (49), Expect(4) = 0.0
Identities = 8/9 (88%), Positives = 9/9 (99%)
Frame = -2
Query: 2118 ELGNPDGGD 2092
+LGNPDGGD
Sbjct: 217 DLGNPDGGD 225
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,905,084,631
Number of Sequences: 1393205
Number of extensions: 44012280
Number of successful extensions: 121599
Number of sequences better than 10.0: 235
Number of HSP's better than 10.0 without gapping: 110617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 120876
length of database: 448,689,247
effective HSP length: 131
effective length of database: 266,179,392
effective search space used: 157844379456
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
