Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000505A_C01 KMC000505A_c01
(661 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC29435.1| P-type H+-ATPase [Vicia faba] 267 8e-71
pir||T52414 H+-exporting ATPase (EC 3.6.3.6), plasma membrane [i... 263 2e-69
dbj|BAC42716.1| putative H+-transporting ATPase [Arabidopsis tha... 259 2e-68
ref|NP_190378.1| H+-transporting ATPase - like protein; protein ... 259 2e-68
ref|NP_201073.1| plasma membrane proton ATPase-like; protein id:... 256 2e-67
>emb|CAC29435.1| P-type H+-ATPase [Vicia faba]
Length = 958
Score = 267 bits (683), Expect = 8e-71
Identities = 126/143 (88%), Positives = 136/143 (94%)
Frame = -2
Query: 660 NWSFAAIEGIGWXWAGVVWLYNLIFYIPLDFIKFITRYALSGRAWDLVIEQRIAFTRKKD 481
+WSFAAIEGIGW WAGV+WLYN+IFYIPLDFIKF TRYALSGRAWDLVIEQRIAFTR+KD
Sbjct: 816 SWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFTRYALSGRAWDLVIEQRIAFTRQKD 875
Query: 480 FGKEERELKWAHAQRTLHGLHPPETKMFHERKNYTDINQMAEEAKRRAEITRLRELHTLK 301
FGKE+REL+WAHAQRTLHGL PP+TKMF ER + T++NQMAEEAKRRAEI RLRELHTLK
Sbjct: 876 FGKEQRELQWAHAQRTLHGLQPPDTKMFTERTHVTELNQMAEEAKRRAEIARLRELHTLK 935
Query: 300 GHVESVVRLKGLDIDTIQQAYTV 232
GHVESVVRLKGLDIDTIQQAYTV
Sbjct: 936 GHVESVVRLKGLDIDTIQQAYTV 958
>pir||T52414 H+-exporting ATPase (EC 3.6.3.6), plasma membrane [imported] - Prunus
persica gi|6759599|emb|CAB69824.1| plasma membrane H+
ATPase [Prunus persica]
Length = 956
Score = 263 bits (672), Expect = 2e-69
Identities = 122/143 (85%), Positives = 135/143 (94%)
Frame = -2
Query: 660 NWSFAAIEGIGWXWAGVVWLYNLIFYIPLDFIKFITRYALSGRAWDLVIEQRIAFTRKKD 481
NWSFAAIEGIGW WAGV+WLYNL+FY PLD IKF+ RYALSG+AWDL+IEQRIAFTR+KD
Sbjct: 814 NWSFAAIEGIGWGWAGVIWLYNLVFYFPLDIIKFMIRYALSGKAWDLLIEQRIAFTRQKD 873
Query: 480 FGKEERELKWAHAQRTLHGLHPPETKMFHERKNYTDINQMAEEAKRRAEITRLRELHTLK 301
FGKE+REL+WAHAQRTLHGL PP+TKMF ER ++T++NQMAEEAKRRAEI RLRELHTLK
Sbjct: 874 FGKEQRELQWAHAQRTLHGLQPPDTKMFTERTHFTELNQMAEEAKRRAEIARLRELHTLK 933
Query: 300 GHVESVVRLKGLDIDTIQQAYTV 232
GHVESVVRLKGLDIDTIQQAYTV
Sbjct: 934 GHVESVVRLKGLDIDTIQQAYTV 956
>dbj|BAC42716.1| putative H+-transporting ATPase [Arabidopsis thaliana]
Length = 960
Score = 259 bits (662), Expect = 2e-68
Identities = 121/143 (84%), Positives = 134/143 (93%)
Frame = -2
Query: 660 NWSFAAIEGIGWXWAGVVWLYNLIFYIPLDFIKFITRYALSGRAWDLVIEQRIAFTRKKD 481
NWSFAAIEGIGW WAGV+WLYN+IFYIPLDFIKF RYALSGRAWDLVIEQR+AFTR+KD
Sbjct: 818 NWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRVAFTRQKD 877
Query: 480 FGKEERELKWAHAQRTLHGLHPPETKMFHERKNYTDINQMAEEAKRRAEITRLRELHTLK 301
FGKE+REL+WAHAQRTLHGL P+TKMF +R + +++NQMAEEAKRRAEI RLRELHTLK
Sbjct: 878 FGKEQRELQWAHAQRTLHGLQAPDTKMFTDRTHVSELNQMAEEAKRRAEIARLRELHTLK 937
Query: 300 GHVESVVRLKGLDIDTIQQAYTV 232
GHVESVVRLKGLDI+TIQQAYTV
Sbjct: 938 GHVESVVRLKGLDIETIQQAYTV 960
>ref|NP_190378.1| H+-transporting ATPase - like protein; protein id: At3g47950.1
[Arabidopsis thaliana] gi|12230481|sp|Q9SU58|PMA4_ARATH
ATPase 4, plasma membrane-type (Proton pump 4)
gi|7436353|pir||T06688 H+-exporting ATPase (EC 3.6.3.6)
T17F15.180 - Arabidopsis thaliana
gi|4678333|emb|CAB41144.1| H+-transporting ATPase-like
protein [Arabidopsis thaliana]
Length = 960
Score = 259 bits (662), Expect = 2e-68
Identities = 121/143 (84%), Positives = 134/143 (93%)
Frame = -2
Query: 660 NWSFAAIEGIGWXWAGVVWLYNLIFYIPLDFIKFITRYALSGRAWDLVIEQRIAFTRKKD 481
NWSFAAIEGIGW WAGV+WLYN+IFYIPLDFIKF RYALSGRAWDLVIEQR+AFTR+KD
Sbjct: 818 NWSFAAIEGIGWGWAGVIWLYNIIFYIPLDFIKFFIRYALSGRAWDLVIEQRVAFTRQKD 877
Query: 480 FGKEERELKWAHAQRTLHGLHPPETKMFHERKNYTDINQMAEEAKRRAEITRLRELHTLK 301
FGKE+REL+WAHAQRTLHGL P+TKMF +R + +++NQMAEEAKRRAEI RLRELHTLK
Sbjct: 878 FGKEQRELQWAHAQRTLHGLQAPDTKMFTDRTHVSELNQMAEEAKRRAEIARLRELHTLK 937
Query: 300 GHVESVVRLKGLDIDTIQQAYTV 232
GHVESVVRLKGLDI+TIQQAYTV
Sbjct: 938 GHVESVVRLKGLDIETIQQAYTV 960
>ref|NP_201073.1| plasma membrane proton ATPase-like; protein id: At5g62670.1
[Arabidopsis thaliana] gi|12230459|sp|Q9LV11|PMAB_ARATH
ATPase 11, plasma membrane-type (Proton pump 11)
gi|8809663|dbj|BAA97214.1| plasma membrane proton
ATPase-like [Arabidopsis thaliana]
gi|21928115|gb|AAM78085.1| AT5g62670/MRG21_9 [Arabidopsis
thaliana]
Length = 956
Score = 256 bits (653), Expect = 2e-67
Identities = 118/143 (82%), Positives = 133/143 (92%)
Frame = -2
Query: 660 NWSFAAIEGIGWXWAGVVWLYNLIFYIPLDFIKFITRYALSGRAWDLVIEQRIAFTRKKD 481
NWSFAAIEGIGW WAGV+WLYN++FYIPLD IKF+ RYALSGRAWDLVIEQR+AFTR+KD
Sbjct: 814 NWSFAAIEGIGWGWAGVIWLYNIVFYIPLDIIKFLIRYALSGRAWDLVIEQRVAFTRQKD 873
Query: 480 FGKEERELKWAHAQRTLHGLHPPETKMFHERKNYTDINQMAEEAKRRAEITRLRELHTLK 301
FGKE+REL+WAHAQRTLHGL P+ KMF ER ++ +++QMAEEAKRRAEI RLRELHTLK
Sbjct: 874 FGKEQRELQWAHAQRTLHGLQAPDAKMFPERTHFNELSQMAEEAKRRAEIARLRELHTLK 933
Query: 300 GHVESVVRLKGLDIDTIQQAYTV 232
GHVESVVRLKGLDI+TIQQAYTV
Sbjct: 934 GHVESVVRLKGLDIETIQQAYTV 956
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 597,883,670
Number of Sequences: 1393205
Number of extensions: 13277975
Number of successful extensions: 33891
Number of sequences better than 10.0: 103
Number of HSP's better than 10.0 without gapping: 32613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33827
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 28289785200
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
