Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000503A_C01 KMC000503A_c01
(1072 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_172380.1| hypothetical protein; protein id: At1g09060.1 [... 137 3e-31
pir||F86222 hypothetical protein [imported] - Arabidopsis thalia... 127 4e-28
dbj|BAB64184.1| P0492G09.4 [Oryza sativa (japonica cultivar-grou... 104 3e-21
gb|AAL60025.1| unknown protein [Arabidopsis thaliana] gi|2046574... 87 3e-16
ref|NP_192008.2| putative protein (fragment); protein id: At4g00... 87 3e-16
>ref|NP_172380.1| hypothetical protein; protein id: At1g09060.1 [Arabidopsis thaliana]
Length = 911
Score = 137 bits (345), Expect = 3e-31
Identities = 64/80 (80%), Positives = 74/80 (92%)
Frame = -3
Query: 1070 AIFVPAGCPFQARNVQSTVQLGLDFLSPESLGEAVRLAEEVRCLPNEHEAKLQVLEVGKI 891
AIF+PAGCPFQ N+QS +Q+ LDFL PES+GE+ RLAEE+RCLPN+HEAKLQ+LE+GKI
Sbjct: 832 AIFIPAGCPFQITNLQSNIQVALDFLCPESVGESARLAEEIRCLPNDHEAKLQILEIGKI 891
Query: 890 SLYAASSAIKEVQKLVLDPK 831
SLYAASSAIKEVQKLVLDPK
Sbjct: 892 SLYAASSAIKEVQKLVLDPK 911
>pir||F86222 hypothetical protein [imported] - Arabidopsis thaliana
gi|2342679|gb|AAB70402.1| Similar to Vicia sativa ENBP1
(gb|X95995). [Arabidopsis thaliana]
Length = 950
Score = 127 bits (318), Expect = 4e-28
Identities = 62/80 (77%), Positives = 71/80 (88%)
Frame = -3
Query: 1070 AIFVPAGCPFQARNVQSTVQLGLDFLSPESLGEAVRLAEEVRCLPNEHEAKLQVLEVGKI 891
AIF+PAGCPFQ N+Q + LDFL PES+GE+ RLAEE+RCLPN+HEAKLQ+LE+GKI
Sbjct: 875 AIFIPAGCPFQITNLQ----VALDFLCPESVGESARLAEEIRCLPNDHEAKLQILEIGKI 930
Query: 890 SLYAASSAIKEVQKLVLDPK 831
SLYAASSAIKEVQKLVLDPK
Sbjct: 931 SLYAASSAIKEVQKLVLDPK 950
>dbj|BAB64184.1| P0492G09.4 [Oryza sativa (japonica cultivar-group)]
gi|21104661|dbj|BAB93252.1| P0423A12.23 [Oryza sativa
(japonica cultivar-group)]
Length = 314
Score = 104 bits (259), Expect = 3e-21
Identities = 49/87 (56%), Positives = 65/87 (74%)
Frame = +1
Query: 4 EVKGTLINSSLREDSVKNAKYYELEFRVESPSFQRHNVCVCCACGGRLFTLNAQAPETAW 183
++ TL++++LRED N KYY+LEFRVESPSF+R NV VCCA G+L+TLNAQAPE+AW
Sbjct: 194 DINATLLDAALREDPANNVKYYKLEFRVESPSFRRRNVAVCCAKDGKLYTLNAQAPESAW 253
Query: 184 PRLKSDFYRIAHSFSLTA**FQMKLHW 264
++ +F +A SFSL A KLH+
Sbjct: 254 KAVRKEFLAMADSFSLVA---DRKLHF 277
>gb|AAL60025.1| unknown protein [Arabidopsis thaliana] gi|20465747|gb|AAM20342.1|
unknown protein [Arabidopsis thaliana]
Length = 840
Score = 87.4 bits (215), Expect = 3e-16
Identities = 41/76 (53%), Positives = 58/76 (75%)
Frame = -3
Query: 1070 AIFVPAGCPFQARNVQSTVQLGLDFLSPESLGEAVRLAEEVRCLPNEHEAKLQVLEVGKI 891
A+F+PAGCP Q RN QS +++ LDF++PES+ E +RL +E R LP +H + LE+ KI
Sbjct: 757 AVFIPAGCPHQVRNRQSCIKVALDFVAPESVEECLRLTQEFRRLPKDHSSSEDKLELKKI 816
Query: 890 SLYAASSAIKEVQKLV 843
+LYAASSAI+EV+ L+
Sbjct: 817 ALYAASSAIREVKGLM 832
>ref|NP_192008.2| putative protein (fragment); protein id: At4g00990.1, supported by
cDNA: gi_18176334 [Arabidopsis thaliana]
Length = 454
Score = 87.4 bits (215), Expect = 3e-16
Identities = 41/76 (53%), Positives = 58/76 (75%)
Frame = -3
Query: 1070 AIFVPAGCPFQARNVQSTVQLGLDFLSPESLGEAVRLAEEVRCLPNEHEAKLQVLEVGKI 891
A+F+PAGCP Q RN QS +++ LDF++PES+ E +RL +E R LP +H + LE+ KI
Sbjct: 371 AVFIPAGCPHQVRNRQSCIKVALDFVAPESVEECLRLTQEFRRLPKDHSSSEDKLELKKI 430
Query: 890 SLYAASSAIKEVQKLV 843
+LYAASSAI+EV+ L+
Sbjct: 431 ALYAASSAIREVKGLM 446
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 867,317,343
Number of Sequences: 1393205
Number of extensions: 18025487
Number of successful extensions: 37788
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 36339
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37782
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 64016183864
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
