Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000475A_C01 KMC000475A_c01
(632 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_181051.1| putative potassium transporter; protein id: At2... 146 2e-34
emb|CAD21001.1| putative potasium transporter [Oryza sativa (jap... 145 4e-34
ref|NP_174397.1| putative potassium transporter; protein id: At1... 142 3e-33
pir||G86436 hypothetical protein F28K20.5 [imported] - Arabidops... 142 3e-33
emb|CAD21002.1| putative potasium transporter [Oryza sativa (jap... 137 1e-31
>ref|NP_181051.1| putative potassium transporter; protein id: At2g35060.1, supported by
cDNA: gi_20466267 [Arabidopsis thaliana]
gi|7488027|pir||T00487 probable potassium transport
protein F19I3.29 - Arabidopsis thaliana
gi|3033401|gb|AAC12845.1| putative potassium transporter
[Arabidopsis thaliana] gi|20466268|gb|AAM20451.1|
putative potassium transporter [Arabidopsis thaliana]
gi|25084027|gb|AAN72158.1| putative potassium transporter
[Arabidopsis thaliana]
Length = 792
Score = 146 bits (369), Expect = 2e-34
Identities = 76/124 (61%), Positives = 93/124 (74%)
Frame = -1
Query: 611 QSRDGILNNHGNTASSNVDLSISSVDSILPARSPSNVHVTFQSSGHGSNNTEVDELEFIN 432
Q +D + N + N + D + S++SI P + SN VT S G VDELEFIN
Sbjct: 676 QLKDTLGNGNENENLATFD-TFDSIESITPVKRVSNT-VTASSQMSG-----VDELEFIN 728
Query: 431 SCRDAGVVHILGNTVVRARRDSRFYKKIAVDYIYAFLRKVCREHSVIFNIPHESLLNVGQ 252
CRDAGVVHI+GNTVVRARR++RFYKKIA+DY+YAFLRK+CREHSVI+N+P ESLLNVGQ
Sbjct: 729 GCRDAGVVHIMGNTVVRARREARFYKKIAIDYVYAFLRKICREHSVIYNVPQESLLNVGQ 788
Query: 251 VFYV 240
+FYV
Sbjct: 789 IFYV 792
>emb|CAD21001.1| putative potasium transporter [Oryza sativa (japonica
cultivar-group)]
Length = 791
Score = 145 bits (366), Expect = 4e-34
Identities = 72/115 (62%), Positives = 90/115 (77%)
Frame = -1
Query: 584 HGNTASSNVDLSISSVDSILPARSPSNVHVTFQSSGHGSNNTEVDELEFINSCRDAGVVH 405
+ NT SN DLS SS DSI+P +SP + + S S+ T DELEF+N C+DAGVVH
Sbjct: 678 NNNTMCSNGDLSYSSQDSIVPVQSPLRGNSLLRYSSQASH-TVSDELEFLNRCKDAGVVH 736
Query: 404 ILGNTVVRARRDSRFYKKIAVDYIYAFLRKVCREHSVIFNIPHESLLNVGQVFYV 240
ILGNT+V ARRDS KKIAV+Y+YAF+RK+CRE+SVIFN+PHESLLNVGQ++Y+
Sbjct: 737 ILGNTIVLARRDSGIIKKIAVNYMYAFMRKICRENSVIFNVPHESLLNVGQIYYI 791
>ref|NP_174397.1| putative potassium transporter; protein id: At1g31120.1 [Arabidopsis
thaliana]
Length = 796
Score = 142 bits (359), Expect = 3e-33
Identities = 70/129 (54%), Positives = 90/129 (69%)
Frame = -1
Query: 626 GQQTVQSRDGILNNHGNTASSNVDLSISSVDSILPARSPSNVHVTFQSSGHGSNNTEVDE 447
G Q QSRDG+ N + + + S++S++ + T S S DE
Sbjct: 670 GSQQRQSRDGVNGNGNEIRNVSTFDTFDSIESVIAPTTTKRTSHTVTGSSQMSGGG--DE 727
Query: 446 LEFINSCRDAGVVHILGNTVVRARRDSRFYKKIAVDYIYAFLRKVCREHSVIFNIPHESL 267
+EFIN CRDAGVVHI+GNTVVRARR++RFYK+IA+DY+YAFLRK+CRE+S IFN+P ESL
Sbjct: 728 VEFINGCRDAGVVHIMGNTVVRARREARFYKRIAIDYVYAFLRKICRENSAIFNVPQESL 787
Query: 266 LNVGQVFYV 240
LNVGQ+FYV
Sbjct: 788 LNVGQIFYV 796
>pir||G86436 hypothetical protein F28K20.5 [imported] - Arabidopsis thaliana
gi|4512624|gb|AAD21693.1| Strong similarity to gi|3033401
F19I3.29 putative potassium transporter from Arabidopsis
thaliana BAC gb|AC004238
Length = 787
Score = 142 bits (359), Expect = 3e-33
Identities = 70/129 (54%), Positives = 90/129 (69%)
Frame = -1
Query: 626 GQQTVQSRDGILNNHGNTASSNVDLSISSVDSILPARSPSNVHVTFQSSGHGSNNTEVDE 447
G Q QSRDG+ N + + + S++S++ + T S S DE
Sbjct: 661 GSQQRQSRDGVNGNGNEIRNVSTFDTFDSIESVIAPTTTKRTSHTVTGSSQMSGGG--DE 718
Query: 446 LEFINSCRDAGVVHILGNTVVRARRDSRFYKKIAVDYIYAFLRKVCREHSVIFNIPHESL 267
+EFIN CRDAGVVHI+GNTVVRARR++RFYK+IA+DY+YAFLRK+CRE+S IFN+P ESL
Sbjct: 719 VEFINGCRDAGVVHIMGNTVVRARREARFYKRIAIDYVYAFLRKICRENSAIFNVPQESL 778
Query: 266 LNVGQVFYV 240
LNVGQ+FYV
Sbjct: 779 LNVGQIFYV 787
>emb|CAD21002.1| putative potasium transporter [Oryza sativa (japonica
cultivar-group)]
Length = 793
Score = 137 bits (345), Expect = 1e-31
Identities = 70/114 (61%), Positives = 87/114 (75%), Gaps = 1/114 (0%)
Frame = -1
Query: 578 NTASSNVDLSISSVDSILPARSPSNVH-VTFQSSGHGSNNTEVDELEFINSCRDAGVVHI 402
NT S DLS SS DSI+PA+SP + +T SS + E LEF+N C+DAGVVHI
Sbjct: 680 NTMCSTGDLSYSSQDSIVPAKSPIRGNSLTRYSSQTFGDELEFLNLEFLNRCKDAGVVHI 739
Query: 401 LGNTVVRARRDSRFYKKIAVDYIYAFLRKVCREHSVIFNIPHESLLNVGQVFYV 240
LGNTVV AR DS KK+AV+Y++AFLRK+CRE+SVIFN+PHESLLNVGQ++Y+
Sbjct: 740 LGNTVVHARPDSGIIKKVAVNYVFAFLRKICRENSVIFNVPHESLLNVGQIYYI 793
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 491,851,196
Number of Sequences: 1393205
Number of extensions: 9911193
Number of successful extensions: 22075
Number of sequences better than 10.0: 64
Number of HSP's better than 10.0 without gapping: 21484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22060
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 26154777244
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
