Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000453A_C01 KMC000453A_c01
(616 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC41321.1| unnamed protein product [Lotus japonicus] 203 1e-51
emb|CAD27718.1| putative vacuolar ATPase subunit 100 kDa subunit... 185 5e-46
pir||T06068 probable proton pump F19H22.180 - Arabidopsis thalia... 182 4e-45
ref|NP_568051.1| putative proton pump; protein id: At4g39080.1, ... 182 4e-45
gb|AAK96647.1| At2g21410/F3K23.17 [Arabidopsis thaliana] gi|2170... 182 4e-45
>dbj|BAC41321.1| unnamed protein product [Lotus japonicus]
Length = 702
Score = 203 bits (517), Expect = 1e-51
Identities = 101/101 (100%), Positives = 101/101 (100%)
Frame = -3
Query: 614 NTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNNVIILIVGILVFIFATVGVLLVMETL 435
NTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNNVIILIVGILVFIFATVGVLLVMETL
Sbjct: 602 NTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNNVIILIVGILVFIFATVGVLLVMETL 661
Query: 434 SAFLHALRLHWVEFQNKFYEGDGYKFFPFSFSLLDEEDEVL 312
SAFLHALRLHWVEFQNKFYEGDGYKFFPFSFSLLDEEDEVL
Sbjct: 662 SAFLHALRLHWVEFQNKFYEGDGYKFFPFSFSLLDEEDEVL 702
>emb|CAD27718.1| putative vacuolar ATPase subunit 100 kDa subunit [Mesembryanthemum
crystallinum]
Length = 816
Score = 185 bits (469), Expect = 5e-46
Identities = 89/99 (89%), Positives = 96/99 (96%)
Frame = -3
Query: 614 NTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNNVIILIVGILVFIFATVGVLLVMETL 435
NTASYLRLWALSLAHSELSSVFY+KVLLLAWG+NNV+ILIVGI+VFIFATVGVLLVMETL
Sbjct: 718 NTASYLRLWALSLAHSELSSVFYDKVLLLAWGFNNVLILIVGIIVFIFATVGVLLVMETL 777
Query: 434 SAFLHALRLHWVEFQNKFYEGDGYKFFPFSFSLLDEEDE 318
SAFLHALRLHWVEFQNKFY GDGYKF+PFSFS + EE+E
Sbjct: 778 SAFLHALRLHWVEFQNKFYLGDGYKFYPFSFSTIGEEEE 816
>pir||T06068 probable proton pump F19H22.180 - Arabidopsis thaliana
gi|4539327|emb|CAB38828.1| putative proton pump
[Arabidopsis thaliana] gi|7270891|emb|CAB80571.1|
putative proton pump [Arabidopsis thaliana]
Length = 843
Score = 182 bits (461), Expect = 4e-45
Identities = 89/99 (89%), Positives = 92/99 (92%)
Frame = -3
Query: 614 NTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNNVIILIVGILVFIFATVGVLLVMETL 435
NTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNN +ILIVG+LVFIFATVGVLLVMETL
Sbjct: 745 NTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNNPLILIVGVLVFIFATVGVLLVMETL 804
Query: 434 SAFLHALRLHWVEFQNKFYEGDGYKFFPFSFSLLDEEDE 318
SAFLHALRLHWVEFQNKFYEGDGYKF PF+F EDE
Sbjct: 805 SAFLHALRLHWVEFQNKFYEGDGYKFAPFTFIFTANEDE 843
>ref|NP_568051.1| putative proton pump; protein id: At4g39080.1, supported by cDNA:
gi_16974582 [Arabidopsis thaliana]
gi|16974583|gb|AAL31187.1| AT4g39080/F19H22_180
[Arabidopsis thaliana] gi|27363224|gb|AAO11531.1|
At4g39080/F19H22_180 [Arabidopsis thaliana]
Length = 821
Score = 182 bits (461), Expect = 4e-45
Identities = 89/99 (89%), Positives = 92/99 (92%)
Frame = -3
Query: 614 NTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNNVIILIVGILVFIFATVGVLLVMETL 435
NTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNN +ILIVG+LVFIFATVGVLLVMETL
Sbjct: 723 NTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNNPLILIVGVLVFIFATVGVLLVMETL 782
Query: 434 SAFLHALRLHWVEFQNKFYEGDGYKFFPFSFSLLDEEDE 318
SAFLHALRLHWVEFQNKFYEGDGYKF PF+F EDE
Sbjct: 783 SAFLHALRLHWVEFQNKFYEGDGYKFAPFTFIFTANEDE 821
>gb|AAK96647.1| At2g21410/F3K23.17 [Arabidopsis thaliana] gi|21700881|gb|AAM70564.1|
At2g21410/F3K23.17 [Arabidopsis thaliana]
Length = 821
Score = 182 bits (461), Expect = 4e-45
Identities = 88/99 (88%), Positives = 94/99 (94%)
Frame = -3
Query: 614 NTASYLRLWALSLAHSELSSVFYEKVLLLAWGYNNVIILIVGILVFIFATVGVLLVMETL 435
NTASYLRLWALSLAHSELSSVFYEKVLL+AWG+NNV I IVGILVFIFATVGVLLVMETL
Sbjct: 723 NTASYLRLWALSLAHSELSSVFYEKVLLMAWGFNNVFIWIVGILVFIFATVGVLLVMETL 782
Query: 434 SAFLHALRLHWVEFQNKFYEGDGYKFFPFSFSLLDEEDE 318
SAFLHALRLHWVE+QNKFYEGDGYKF PF+F+L+ EDE
Sbjct: 783 SAFLHALRLHWVEYQNKFYEGDGYKFAPFTFTLVGNEDE 821
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 521,387,599
Number of Sequences: 1393205
Number of extensions: 11183446
Number of successful extensions: 30429
Number of sequences better than 10.0: 144
Number of HSP's better than 10.0 without gapping: 28834
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30261
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24854530794
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
