Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000426A_C01 KMC000426A_c01
(626 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL76271.1|AF467783_1 transcription factor EIL2 [Vigna radiata] 130 1e-29
emb|CAB95830.1| hypothetical protein [Cicer arietinum] 107 2e-22
gb|AAK67355.1|AF387795_1 transcription factor [Cucumis melo] 97 1e-19
dbj|BAB64344.1| EIN3-like protein [Cucumis melo] 94 1e-18
dbj|BAA74714.1| transcription factor TEIL [Nicotiana tabacum] 72 6e-12
>gb|AAL76271.1|AF467783_1 transcription factor EIL2 [Vigna radiata]
Length = 622
Score = 130 bits (328), Expect = 1e-29
Identities = 64/85 (75%), Positives = 71/85 (83%)
Frame = -2
Query: 622 MEGNFFEEANISTNHHMFAREENQFDRFKALNSPFEAPHQSSNNNFHLMFGSPCDLASFD 443
MEGN F+EA +S NHH FAR+E QFDRFKALNSPFE H ++NNNFH MFGS CDLASFD
Sbjct: 540 MEGNVFDEATMSNNHHTFARDECQFDRFKALNSPFETNH-NNNNNFHSMFGSFCDLASFD 598
Query: 442 FKEDMQQGVGMEAHQKQPDISIWYQ 368
FKEDM QGVGM+A QKQ D S+WYQ
Sbjct: 599 FKEDM-QGVGMDALQKQTDFSVWYQ 622
>emb|CAB95830.1| hypothetical protein [Cicer arietinum]
Length = 354
Score = 107 bits (266), Expect = 2e-22
Identities = 52/85 (61%), Positives = 64/85 (75%), Gaps = 2/85 (2%)
Frame = -2
Query: 619 EGNFFE-EANISTNHHMFAREENQFDRFKALNSPFEAPHQSSNNNFHLMFGSPCDLASFD 443
+ NFF + + + F R+E+QFDRFK +NSPFE H +NNN HLMFGSPCDLASFD
Sbjct: 271 QDNFFSSQGMVMEAANFFTRDESQFDRFKPINSPFETNH--NNNNIHLMFGSPCDLASFD 328
Query: 442 FKEDMQ-QGVGMEAHQKQPDISIWY 371
FKED+Q QGVG++ KQPD+SIWY
Sbjct: 329 FKEDIQLQGVGIDTFHKQPDMSIWY 353
>gb|AAK67355.1|AF387795_1 transcription factor [Cucumis melo]
Length = 621
Score = 97.4 bits (241), Expect = 1e-19
Identities = 44/86 (51%), Positives = 63/86 (73%), Gaps = 3/86 (3%)
Frame = -2
Query: 625 IMEGNFFEEANISTNHHMFAREENQFDRFKALNSPFE---APHQSSNNNFHLMFGSPCDL 455
+MEGNFF+ +N+S++H MF R+E Q DRFK +NSPFE H ++NNNFHLMF SP DL
Sbjct: 536 MMEGNFFDGSNVSSSHQMFTRDEGQSDRFKPMNSPFENNHHHHNNNNNNFHLMFSSPFDL 595
Query: 454 ASFDFKEDMQQGVGMEAHQKQPDISI 377
++FD+KE++ ++ KQ D+S+
Sbjct: 596 STFDYKEEVPGVAAIDTLSKQQDVSM 621
>dbj|BAB64344.1| EIN3-like protein [Cucumis melo]
Length = 693
Score = 94.4 bits (233), Expect = 1e-18
Identities = 41/68 (60%), Positives = 56/68 (82%), Gaps = 2/68 (2%)
Frame = -2
Query: 625 IMEGNFFEEANISTNHHMFAREENQFDRFKALNSPFE--APHQSSNNNFHLMFGSPCDLA 452
+MEGNFF+ +N+S++H MF R+E QFDRFK +NSPFE H ++NNNFHLMF SP DL+
Sbjct: 537 MMEGNFFDGSNVSSSHQMFTRDEGQFDRFKPMNSPFENNHHHHNNNNNFHLMFSSPFDLS 596
Query: 451 SFDFKEDM 428
+FD+KE++
Sbjct: 597 TFDYKEEV 604
>dbj|BAA74714.1| transcription factor TEIL [Nicotiana tabacum]
Length = 615
Score = 72.0 bits (175), Expect = 6e-12
Identities = 39/85 (45%), Positives = 54/85 (62%)
Frame = -2
Query: 625 IMEGNFFEEANISTNHHMFAREENQFDRFKALNSPFEAPHQSSNNNFHLMFGSPCDLASF 446
I++GN F + NIS NH MF + + +FD+ K L SPF A SN+NFH MFGSP +L S
Sbjct: 537 ILDGNIFGDTNISANHSMFPQGD-RFDQSKVLTSPFNA---GSNDNFHFMFGSPFNLQST 592
Query: 445 DFKEDMQQGVGMEAHQKQPDISIWY 371
D+ E + G+ + KQ D+ +WY
Sbjct: 593 DYTEAL-SGITQDNMPKQ-DVPVWY 615
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 565,804,422
Number of Sequences: 1393205
Number of extensions: 13022821
Number of successful extensions: 27376
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 26638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27353
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25586195130
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
