Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000411A_C02 KMC000411A_c02
(705 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB70751.1| respiratory burst oxidase homolog [Solanum tuber... 256 2e-67
gb|AAF73104.1|AF147783_1 whitefly-induced gp91-phox [Lycopersico... 238 5e-62
ref|NP_172383.1| putative respiratory burst oxidase protein B; p... 238 6e-62
gb|AAC39476.1| respiratory burst oxidase protein B [Arabidopsis ... 238 6e-62
pir||B86223 hypothetical protein [imported] - Arabidopsis thalia... 238 6e-62
>dbj|BAB70751.1| respiratory burst oxidase homolog [Solanum tuberosum]
Length = 867
Score = 256 bits (655), Expect = 2e-67
Identities = 118/143 (82%), Positives = 129/143 (89%)
Frame = -1
Query: 702 KKSPFATKRAYFYWVTREQGSFEWFKGVMNEVAENDKEGVIELHNYCTSVYEEGDARSAL 523
K+SPFATKRAYFYWVTREQGSFEWFKGVM+EV+END+EG+IELHNYCTSVYEEGDARSAL
Sbjct: 725 KRSPFATKRAYFYWVTREQGSFEWFKGVMDEVSENDQEGLIELHNYCTSVYEEGDARSAL 784
Query: 522 ITMLQSLQHAKSGVDVVSETRVKTHFARPNWRNVFKHAALKHPDQRVGVFYCGAHGLVGE 343
ITMLQS+Q AKSGVD+VS TRVKTHFARPNWR VFK + HPDQR+GVFYCG GLVGE
Sbjct: 785 ITMLQSIQQAKSGVDIVSGTRVKTHFARPNWRQVFKRVTINHPDQRIGVFYCGPQGLVGE 844
Query: 342 LKKFSLDFSRKTSTKFDFHKENF 274
L+ S DFS KT TKF+FHKENF
Sbjct: 845 LRHLSQDFSHKTGTKFEFHKENF 867
>gb|AAF73104.1|AF147783_1 whitefly-induced gp91-phox [Lycopersicon esculentum]
gi|8131890|gb|AAF73124.1|AF148534_1 whitefly-induced
gp91-phox [Lycopersicon esculentum]
Length = 938
Score = 238 bits (608), Expect = 5e-62
Identities = 109/142 (76%), Positives = 125/142 (87%)
Frame = -1
Query: 699 KSPFATKRAYFYWVTREQGSFEWFKGVMNEVAENDKEGVIELHNYCTSVYEEGDARSALI 520
++ F T+RAYFYWVTREQGSF+WFKG+MNE AE D +GVIE+HNYCTSVYEEGDARSALI
Sbjct: 797 RNSFNTRRAYFYWVTREQGSFDWFKGIMNEAAEMDHKGVIEMHNYCTSVYEEGDARSALI 856
Query: 519 TMLQSLQHAKSGVDVVSETRVKTHFARPNWRNVFKHAALKHPDQRVGVFYCGAHGLVGEL 340
TMLQSL HAK+GVD+VS TRVK+HFA+PNWRNV+K AL HP+ +VGVFYCGA L EL
Sbjct: 857 TMLQSLHHAKNGVDIVSGTRVKSHFAKPNWRNVYKRIALNHPEAKVGVFYCGAPALTKEL 916
Query: 339 KKFSLDFSRKTSTKFDFHKENF 274
K+ +LDFS KTSTKFDFHKENF
Sbjct: 917 KQHALDFSHKTSTKFDFHKENF 938
>ref|NP_172383.1| putative respiratory burst oxidase protein B; protein id: At1g09090.1
[Arabidopsis thaliana]
Length = 838
Score = 238 bits (607), Expect = 6e-62
Identities = 111/142 (78%), Positives = 125/142 (87%)
Frame = -1
Query: 699 KSPFATKRAYFYWVTREQGSFEWFKGVMNEVAENDKEGVIELHNYCTSVYEEGDARSALI 520
K+ ATKRAYFYWVTREQGS EWF VMNEVAE D EG+IELHNYCTSVYEEGDARSALI
Sbjct: 697 KNYVATKRAYFYWVTREQGSLEWFSEVMNEVAEYDSEGMIELHNYCTSVYEEGDARSALI 756
Query: 519 TMLQSLQHAKSGVDVVSETRVKTHFARPNWRNVFKHAALKHPDQRVGVFYCGAHGLVGEL 340
TMLQSL HAKSG+D+VS TRV+THFARPNWR+VFKH A+ H +QRVGVFYCG ++GEL
Sbjct: 757 TMLQSLHHAKSGIDIVSGTRVRTHFARPNWRSVFKHVAVNHVNQRVGVFYCGNTCIIGEL 816
Query: 339 KKFSLDFSRKTSTKFDFHKENF 274
K+ + DFSRKT+TKF+FHKENF
Sbjct: 817 KRLAQDFSRKTTTKFEFHKENF 838
>gb|AAC39476.1| respiratory burst oxidase protein B [Arabidopsis thaliana]
Length = 843
Score = 238 bits (607), Expect = 6e-62
Identities = 111/142 (78%), Positives = 125/142 (87%)
Frame = -1
Query: 699 KSPFATKRAYFYWVTREQGSFEWFKGVMNEVAENDKEGVIELHNYCTSVYEEGDARSALI 520
K+ ATKRAYFYWVTREQGS EWF VMNEVAE D EG+IELHNYCTSVYEEGDARSALI
Sbjct: 702 KNYVATKRAYFYWVTREQGSLEWFSEVMNEVAEYDSEGMIELHNYCTSVYEEGDARSALI 761
Query: 519 TMLQSLQHAKSGVDVVSETRVKTHFARPNWRNVFKHAALKHPDQRVGVFYCGAHGLVGEL 340
TMLQSL HAKSG+D+VS TRV+THFARPNWR+VFKH A+ H +QRVGVFYCG ++GEL
Sbjct: 762 TMLQSLHHAKSGIDIVSGTRVRTHFARPNWRSVFKHVAVNHVNQRVGVFYCGNTCIIGEL 821
Query: 339 KKFSLDFSRKTSTKFDFHKENF 274
K+ + DFSRKT+TKF+FHKENF
Sbjct: 822 KRLAQDFSRKTTTKFEFHKENF 843
>pir||B86223 hypothetical protein [imported] - Arabidopsis thaliana
gi|2342676|gb|AAB70398.1| Strong similarity to Oryza
NADPH oxidase (gb|X93301). [Arabidopsis thaliana]
Length = 578
Score = 238 bits (607), Expect = 6e-62
Identities = 111/142 (78%), Positives = 125/142 (87%)
Frame = -1
Query: 699 KSPFATKRAYFYWVTREQGSFEWFKGVMNEVAENDKEGVIELHNYCTSVYEEGDARSALI 520
K+ ATKRAYFYWVTREQGS EWF VMNEVAE D EG+IELHNYCTSVYEEGDARSALI
Sbjct: 437 KNYVATKRAYFYWVTREQGSLEWFSEVMNEVAEYDSEGMIELHNYCTSVYEEGDARSALI 496
Query: 519 TMLQSLQHAKSGVDVVSETRVKTHFARPNWRNVFKHAALKHPDQRVGVFYCGAHGLVGEL 340
TMLQSL HAKSG+D+VS TRV+THFARPNWR+VFKH A+ H +QRVGVFYCG ++GEL
Sbjct: 497 TMLQSLHHAKSGIDIVSGTRVRTHFARPNWRSVFKHVAVNHVNQRVGVFYCGNTCIIGEL 556
Query: 339 KKFSLDFSRKTSTKFDFHKENF 274
K+ + DFSRKT+TKF+FHKENF
Sbjct: 557 KRLAQDFSRKTTTKFEFHKENF 578
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 583,837,069
Number of Sequences: 1393205
Number of extensions: 12206410
Number of successful extensions: 34825
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 33903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34738
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 32091529758
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
