Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000389A_C03 KMC000389A_c03
(603 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD04750.1| unknown [Human herpesvirus 8] 48 9e-05
ref|NP_703516.1| hypothetical protein [Plasmodium falciparum 3D7... 48 9e-05
gb|EAA20872.1| hypothetical protein [Plasmodium yoelii yoelii] 48 1e-04
sp|P13816|GARP_PLAFF GLUTAMIC ACID-RICH PROTEIN PRECURSOR gi|627... 47 2e-04
ref|NP_473185.2| hypothetical protein, conserved [Plasmodium fal... 46 4e-04
>gb|AAD04750.1| unknown [Human herpesvirus 8]
Length = 416
Score = 48.1 bits (113), Expect = 9e-05
Identities = 23/71 (32%), Positives = 39/71 (54%)
Frame = -1
Query: 414 ERLQQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDP 235
E Q+ ++ E+D ED E+ E +EE + + DD E ++D +D+E+ +
Sbjct: 332 EEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEEDEEEDEEEDEE 391
Query: 234 EQPDNDDDDED 202
E+ + DDDDED
Sbjct: 392 EEDEEDDDDED 402
Score = 41.2 bits (95), Expect = 0.010
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = -1
Query: 393 DKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDPEQPDNDD 214
D+ EQ+ +E+ E+ E +EE + + DD E ++D D+ED + E + D+
Sbjct: 331 DEEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEEDEEEDEEEDE 390
Query: 213 DDED 202
++ED
Sbjct: 391 EEED 394
Score = 38.5 bits (88), Expect = 0.068
Identities = 17/68 (25%), Positives = 37/68 (54%)
Frame = -1
Query: 405 QQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDPEQP 226
++ + E+D ED E+ E +EE + + DD E +++ +D+E+ D E
Sbjct: 339 EEDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEDDEEEDEEEDEEEDEEEEDEEDD 398
Query: 225 DNDDDDED 202
D++D++++
Sbjct: 399 DDEDNEDE 406
Score = 38.1 bits (87), Expect = 0.088
Identities = 22/65 (33%), Positives = 34/65 (51%), Gaps = 1/65 (1%)
Frame = -1
Query: 393 DKAEQDANEDVEDL-TPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDPEQPDND 217
DK + D +D E+ T E +EE + + DD E ++D D+ED D E + D
Sbjct: 322 DKDDNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDEED-----DEEDDEED 376
Query: 216 DDDED 202
D++ED
Sbjct: 377 DEEED 381
Score = 38.1 bits (87), Expect = 0.088
Identities = 19/66 (28%), Positives = 34/66 (50%)
Frame = -1
Query: 393 DKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDPEQPDNDD 214
D E D +D ED + E+ +++ D+ E ++D +D+ED D + D +D
Sbjct: 352 DDEEDDEEDDEEDDEEDDEEDDEEDDEEEDEEEDEEEDEEEEDEEDD---DDEDNEDEED 408
Query: 213 DDEDYS 196
D+E+ S
Sbjct: 409 DEEEDS 414
Score = 38.1 bits (87), Expect = 0.088
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = -1
Query: 384 EQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDPEQPDNDDDDE 205
E ++D D + E+ E + DD E ++D D+ED D E+ D +DD+E
Sbjct: 318 ESQVDKDDNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEEDDE--EDDEEDDEEDDEE 375
Query: 204 D 202
D
Sbjct: 376 D 376
Score = 37.4 bits (85), Expect = 0.15
Identities = 17/63 (26%), Positives = 34/63 (52%)
Frame = -1
Query: 390 KAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDPEQPDNDDD 211
+ ++D N++ +D + +E + + DD E ++D D+ED D E+ D +DD
Sbjct: 320 QVDKDDNDNKDDEEEQETDEEDEEDDEEDDEEDDEEDDEEDDEEDDE--EDDEEDDEEDD 377
Query: 210 DED 202
+E+
Sbjct: 378 EEE 380
Score = 36.6 bits (83), Expect = 0.26
Identities = 16/61 (26%), Positives = 34/61 (55%)
Frame = -1
Query: 384 EQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDPEQPDNDDDDE 205
E+D ED E+ E +EE + + DD E +++ +D+E+ D ++ + D++D+
Sbjct: 350 EEDDEEDDEEDDEEDDEEDDEEDDEEDDEEEDEEEDEEEDEEEEDEEDDDDEDNEDEEDD 409
Query: 204 D 202
+
Sbjct: 410 E 410
Score = 33.1 bits (74), Expect = 2.8
Identities = 20/58 (34%), Positives = 30/58 (51%)
Frame = -1
Query: 375 ANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDPEQPDNDDDDED 202
A ED D +V + D D E +Q+T+ +D+ED D E+ D +DD+ED
Sbjct: 306 AGEDNGDNEISKESQVDKDDNDNKDDEE-EQETDEEDEEDDE--EDDEEDDEEDDEED 360
>ref|NP_703516.1| hypothetical protein [Plasmodium falciparum 3D7]
gi|23504658|emb|CAD51536.1| hypothetical protein
[Plasmodium falciparum 3D7]
Length = 632
Score = 48.1 bits (113), Expect = 9e-05
Identities = 26/75 (34%), Positives = 39/75 (51%)
Frame = -1
Query: 423 SMIERLQQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAI 244
S+ R + D E+D ED ED E +E+ E D DD + ++D D ED
Sbjct: 126 SVSSRSMENEDDEEEDDEEDDEDDEEEDDEDDEDDEDDEDDEDDEEEDDEDDDDED---- 181
Query: 243 HDPEQPDNDDDDEDY 199
D ++ D+DDDD++Y
Sbjct: 182 -DDDEDDDDDDDDNY 195
>gb|EAA20872.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 391
Score = 47.8 bits (112), Expect = 1e-04
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Frame = -1
Query: 414 ERLQQASDKAEQDANED----VEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAA 247
E +++ ++ E+D NED ED E +E+ E+D D+ E +D + +D +D
Sbjct: 217 EEMEEVEEEDEEDENEDDDDEEEDDDEEEDEDEDDEEEDEDEDEDDDEDDDDEDDDDEED 276
Query: 246 IHDPEQPDNDDDDED 202
+D E D +DDD+D
Sbjct: 277 DYDDEDDDGEDDDDD 291
Score = 40.0 bits (92), Expect = 0.023
Identities = 18/68 (26%), Positives = 37/68 (53%)
Frame = -1
Query: 405 QQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDPEQP 226
++ D E+D +ED E+ E +E ++D DD + ++ + D++D D ++
Sbjct: 237 EEEDDDEEEDEDEDDEE---EDEDEDEDDDEDDDDEDDDDEEDDYDDEDDDGEDDDDDEE 293
Query: 225 DNDDDDED 202
D+D +D+D
Sbjct: 294 DDDGEDDD 301
Score = 37.7 bits (86), Expect = 0.12
Identities = 18/76 (23%), Positives = 41/76 (53%)
Frame = -1
Query: 429 IYSMIERLQQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSA 250
I+S IE + K ++ E++E++ E E+ + D ++ + ++D + D+E+
Sbjct: 198 IFSEIE-VNTMGKKKKKQLGEEMEEVEEEDEEDENEDDDDEEEDDDEEEDEDEDDEEEDE 256
Query: 249 AIHDPEQPDNDDDDED 202
+ + D+DD+D+D
Sbjct: 257 DEDEDDDEDDDDEDDD 272
>sp|P13816|GARP_PLAFF GLUTAMIC ACID-RICH PROTEIN PRECURSOR gi|627054|pir||A54514 glutamic
acid-rich protein precursor - malaria parasite
(Plasmodium falciparum) gi|160299|gb|AAA29605.1|
glutamic acid-rich protein [Plasmodium falciparum]
Length = 678
Score = 46.6 bits (109), Expect = 2e-04
Identities = 23/71 (32%), Positives = 38/71 (53%)
Frame = -1
Query: 414 ERLQQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDP 235
E ++ ++ E++ E+ E+ E EE E+D DD E + D +D++D+ D
Sbjct: 577 EEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAE-EDEDDAEEDDDE 635
Query: 234 EQPDNDDDDED 202
E D +DDDED
Sbjct: 636 EDDDEEDDDED 646
Score = 43.5 bits (101), Expect = 0.002
Identities = 21/71 (29%), Positives = 37/71 (51%)
Frame = -1
Query: 414 ERLQQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDP 235
E ++ ++ E++ E+ E+ E E+ E+D DD E + D D E+ D
Sbjct: 584 EEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDDAEEDEDDAEEDDDEED----DD 639
Query: 234 EQPDNDDDDED 202
E+ D++D+DED
Sbjct: 640 EEDDDEDEDED 650
Score = 41.2 bits (95), Expect = 0.010
Identities = 19/71 (26%), Positives = 40/71 (55%)
Frame = -1
Query: 414 ERLQQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDP 235
+ +Q+ ++ E+D E+ E+ E EE E++ ++ E ++D + +D++D+ D
Sbjct: 563 KEVQEDEEEVEEDEEEEEEE-EEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEEDEDD 621
Query: 234 EQPDNDDDDED 202
+ D DD +ED
Sbjct: 622 AEEDEDDAEED 632
Score = 40.4 bits (93), Expect = 0.018
Identities = 18/71 (25%), Positives = 40/71 (55%)
Frame = -1
Query: 414 ERLQQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDP 235
E +++ ++ E++ E+ E+ E EE E++ D+ E + D +D++D+ D
Sbjct: 570 EEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAE-EDEDDAEEDEDD 628
Query: 234 EQPDNDDDDED 202
+ D+D++D+D
Sbjct: 629 AEEDDDEEDDD 639
Score = 37.0 bits (84), Expect = 0.20
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = -1
Query: 402 QASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDPEQPD 223
Q K Q+ E+VE+ E EE E++ ++ E +++ +++++ D + D
Sbjct: 559 QEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDAEED 618
Query: 222 NDDDDED 202
DD +ED
Sbjct: 619 EDDAEED 625
Score = 37.0 bits (84), Expect = 0.20
Identities = 21/71 (29%), Positives = 35/71 (48%)
Frame = -1
Query: 414 ERLQQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDP 235
E ++ ++ E++ +ED ED + E+ E+D DD E D+ED D
Sbjct: 592 EEEEEEEEEEEEEEDEDEED-EDDAEEDEDDAEEDEDDAEED------DDEEDDDEEDDD 644
Query: 234 EQPDNDDDDED 202
E D D++DE+
Sbjct: 645 EDEDEDEEDEE 655
Score = 37.0 bits (84), Expect = 0.20
Identities = 16/70 (22%), Positives = 41/70 (57%), Gaps = 2/70 (2%)
Frame = -1
Query: 405 QQASDKAE--QDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDPE 232
Q+ DK E ++ +++V++ + E E+ E+D ++ E +++ +++E+ + E
Sbjct: 542 QKHVDKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEE 601
Query: 231 QPDNDDDDED 202
+ + D+D+ED
Sbjct: 602 EEEEDEDEED 611
Score = 35.8 bits (81), Expect = 0.44
Identities = 15/71 (21%), Positives = 38/71 (53%)
Frame = -1
Query: 414 ERLQQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDP 235
E ++ K Q+ +++V++ E E+ E++ ++ E +++ +++E+ D
Sbjct: 548 EEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDE 607
Query: 234 EQPDNDDDDED 202
++ D DD +ED
Sbjct: 608 DEEDEDDAEED 618
Score = 35.4 bits (80), Expect = 0.57
Identities = 14/71 (19%), Positives = 36/71 (49%)
Frame = -1
Query: 414 ERLQQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDP 235
+ + + DK E+ E + +EE +++ ++ E +++ +++E+ +
Sbjct: 543 KHVDKEEDKKEESKEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEE 602
Query: 234 EQPDNDDDDED 202
E+ D D++DED
Sbjct: 603 EEEDEDEEDED 613
Score = 33.9 bits (76), Expect = 1.7
Identities = 18/71 (25%), Positives = 37/71 (51%)
Frame = -1
Query: 414 ERLQQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDP 235
+ +Q+ S + ++D E ED E EE E++ ++ E +++ ++ ED D
Sbjct: 556 KEVQEESKEVQEDEEEVEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEDEDEEDEDDA 615
Query: 234 EQPDNDDDDED 202
E+ ++DD E+
Sbjct: 616 EE--DEDDAEE 624
>ref|NP_473185.2| hypothetical protein, conserved [Plasmodium falciparum 3D7]
gi|15375380|emb|CAB39008.2| hypothetical protein,
conserved [Plasmodium falciparum 3D7]
Length = 1114
Score = 45.8 bits (107), Expect = 4e-04
Identities = 23/81 (28%), Positives = 40/81 (48%)
Frame = -1
Query: 414 ERLQQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDP 235
E + DK E D +ED +D + ++ +KD DD + +D N KD++D+ D
Sbjct: 738 ENDKDEDDKDEDDKDEDDKDEDDKDEDDKDEDDKDEDDKDEDDEDDNDKDEDDNDKEEDD 797
Query: 234 EQPDNDDDDEDYSQIWSYTSE 172
DND ++ D ++ Y +
Sbjct: 798 NDNDNDIEENDNTEDSDYRED 818
Score = 41.6 bits (96), Expect = 0.008
Identities = 22/71 (30%), Positives = 42/71 (58%)
Frame = -1
Query: 414 ERLQQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDP 235
++ + +DK E D ++D +D E +E +KD DD + ++D N KD+++ +D
Sbjct: 687 DKEEDDNDKDEDDNDKDEDDNDKEEDEN----DKDEDDNDK-EEDENDKDEDNEDNENDK 741
Query: 234 EQPDNDDDDED 202
++ D D+DD+D
Sbjct: 742 DEDDKDEDDKD 752
Score = 41.2 bits (95), Expect = 0.010
Identities = 21/75 (28%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = -1
Query: 414 ERLQQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQ----EDSAA 247
++ + +DK E D +++ ++ + + E +KD DD + +D + KD+ ED
Sbjct: 708 DKEEDENDKDEDDNDKEEDENDKDEDNEDNENDKDEDDKDEDDKDEDDKDEDDKDEDDKD 767
Query: 246 IHDPEQPDNDDDDED 202
D ++ D D+DDED
Sbjct: 768 EDDKDEDDKDEDDED 782
Score = 37.0 bits (84), Expect = 0.20
Identities = 19/64 (29%), Positives = 35/64 (54%)
Frame = -1
Query: 393 DKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDPEQPDNDD 214
++ E D +ED ED + +E+ +KD DD + +D + KD++D E ++D
Sbjct: 724 EEDENDKDEDNEDNENDKDED----DKDEDDKDEDDKDEDDKDEDDKDEDDKDEDDKDED 779
Query: 213 DDED 202
D++D
Sbjct: 780 DEDD 783
Score = 36.2 bits (82), Expect = 0.34
Identities = 18/64 (28%), Positives = 31/64 (48%)
Frame = -1
Query: 393 DKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDPEQPDNDD 214
D+ + D ED D + N++ E+D +D + +D ED D ++ D D+
Sbjct: 703 DEDDNDKEEDENDKDEDDNDK----EEDENDKDEDNEDNENDKDEDDKDEDDKDEDDKDE 758
Query: 213 DDED 202
DD+D
Sbjct: 759 DDKD 762
Score = 36.2 bits (82), Expect = 0.34
Identities = 19/72 (26%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Frame = -1
Query: 414 ERLQQASDKAEQDA-NEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHD 238
++ + +DK E + NE+ +D + ++ +KD DD + +D + KD++D +
Sbjct: 722 DKEEDENDKDEDNEDNENDKDEDDKDEDDKDEDDKDEDDKDEDDKDEDDKDEDDK---DE 778
Query: 237 PEQPDNDDDDED 202
++ DND D++D
Sbjct: 779 DDEDDNDKDEDD 790
Score = 35.4 bits (80), Expect = 0.57
Identities = 22/65 (33%), Positives = 35/65 (53%)
Frame = -1
Query: 396 SDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDPEQPDND 217
+DK E + ++D +D E +E ++D +D E K D + KD++D D + D D
Sbjct: 707 NDKEEDENDKDEDDNDKEEDEN--DKDEDNEDNENDK-DEDDKDEDDK----DEDDKDED 759
Query: 216 DDDED 202
D DED
Sbjct: 760 DKDED 764
Score = 34.7 bits (78), Expect = 0.97
Identities = 19/71 (26%), Positives = 36/71 (49%)
Frame = -1
Query: 414 ERLQQASDKAEQDANEDVEDLTPETNEEVATTEKDTDDVETTKQDTNVKDQEDSAAIHDP 235
++ + +DK E D ++D +D +KD DD + ++D N KD++D+ D
Sbjct: 680 KKKNERNDKEEDDNDKDEDD-----------NDKDEDDNDK-EEDENDKDEDDNDKEEDE 727
Query: 234 EQPDNDDDDED 202
D D++D +
Sbjct: 728 NDKDEDNEDNE 738
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 446,048,305
Number of Sequences: 1393205
Number of extensions: 8724617
Number of successful extensions: 71372
Number of sequences better than 10.0: 943
Number of HSP's better than 10.0 without gapping: 41423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 60429
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23711793746
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
