Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000384A_C01 KMC000384A_c01
(517 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD02075.3| subtilisin-like protease C1 [Glycine max] 95 4e-19
pir||T12963 subtilisin homolog T6H20.120 - Arabidopsis thaliana ... 85 4e-16
ref|NP_566888.1| subtilisin-like serine protease; protein id: At... 85 4e-16
pir||H71413 probable cucumisin - Arabidopsis thaliana 85 4e-16
ref|NP_567454.1| subtilisin-like serine protease; protein id: At... 85 4e-16
>gb|AAD02075.3| subtilisin-like protease C1 [Glycine max]
Length = 628
Score = 95.1 bits (235), Expect = 4e-19
Identities = 52/101 (51%), Positives = 67/101 (65%), Gaps = 3/101 (2%)
Frame = -2
Query: 513 NLNLPSFAIF---HGDVGVSPRVFRRTVTNVGLPKSTYKAKVITPSLLEIPVKPDVLSFT 343
+LN SFA+F + VS F RTVTNVG PKSTYKA V +P L+I V P VL FT
Sbjct: 526 DLNYASFALFVPPYNSNSVSGS-FNRTVTNVGSPKSTYKATVTSPKGLKIEVNPSVLPFT 584
Query: 342 SIGPKKSFSVVVEGALTVNVISATLVWDDGNFPVRSPIVVY 220
S+ K++F + + G L ++S +LVWDDG + VRSPIVV+
Sbjct: 585 SLNQKQTFVLTITGKLEGPIVSGSLVWDDGKYQVRSPIVVF 625
>pir||T12963 subtilisin homolog T6H20.120 - Arabidopsis thaliana
gi|5541674|emb|CAB51180.1| subtilisin-like proteinase
homolog [Arabidopsis thaliana]
Length = 736
Score = 85.1 bits (209), Expect = 4e-16
Identities = 52/100 (52%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Frame = -2
Query: 513 NLNLPSFAIFHGDVGVSPRVFRRTVTNVGLPKSTYKAKVITPSLLEIPVKPDVLSFTSIG 334
NLN PS + FRRTVTNVG P +TYKAKV+ S L++ V P VLS S+
Sbjct: 637 NLNYPSMSAQVSGTKPFKVTFRRTVTNVGRPNATYKAKVV-GSKLKVKVVPAVLSLKSLY 695
Query: 333 PKKSFSVVVEGA--LTVNVISATLVWDDGNFPVRSPIVVY 220
KKSF+V V GA N++SA L+W DG VRSPIVVY
Sbjct: 696 EKKSFTVTVSGAGPKAENLVSAQLIWSDGVHFVRSPIVVY 735
>ref|NP_566888.1| subtilisin-like serine protease; protein id: At3g46850.1
[Arabidopsis thaliana]
Length = 737
Score = 85.1 bits (209), Expect = 4e-16
Identities = 52/100 (52%), Positives = 62/100 (62%), Gaps = 2/100 (2%)
Frame = -2
Query: 513 NLNLPSFAIFHGDVGVSPRVFRRTVTNVGLPKSTYKAKVITPSLLEIPVKPDVLSFTSIG 334
NLN PS + FRRTVTNVG P +TYKAKV+ S L++ V P VLS S+
Sbjct: 638 NLNYPSMSAQVSGTKPFKVTFRRTVTNVGRPNATYKAKVV-GSKLKVKVVPAVLSLKSLY 696
Query: 333 PKKSFSVVVEGA--LTVNVISATLVWDDGNFPVRSPIVVY 220
KKSF+V V GA N++SA L+W DG VRSPIVVY
Sbjct: 697 EKKSFTVTVSGAGPKAENLVSAQLIWSDGVHFVRSPIVVY 736
>pir||H71413 probable cucumisin - Arabidopsis thaliana
Length = 439
Score = 85.1 bits (209), Expect = 4e-16
Identities = 51/101 (50%), Positives = 61/101 (59%), Gaps = 3/101 (2%)
Frame = -2
Query: 513 NLNLPSFAIFHGDVGVSPRVFRRTVTNVGLPKSTYKAKVITPSLLEIPVKPDVLSFTSIG 334
NLN PS + S F RTVTNVG STYKAK+ L I V+P LSF + G
Sbjct: 338 NLNYPSMSAKVSASSSSDITFSRTVTNVGEKGSTYKAKLSGNPKLSIKVEPATLSFKAPG 397
Query: 333 PKKSFSVVVEG---ALTVNVISATLVWDDGNFPVRSPIVVY 220
KKSF+V V G A N++SA+L+W DG+ VRSPIVVY
Sbjct: 398 EKKSFTVTVSGKSLAGISNIVSASLIWSDGSHNVRSPIVVY 438
>ref|NP_567454.1| subtilisin-like serine protease; protein id: At4g15040.1
[Arabidopsis thaliana] gi|25289826|pir||D85165 cucumisin
[imported] - Arabidopsis thaliana
gi|5302780|emb|CAB46058.1| cucumisin [Arabidopsis
thaliana] gi|7268250|emb|CAB78546.1| cucumisin
[Arabidopsis thaliana]
Length = 687
Score = 85.1 bits (209), Expect = 4e-16
Identities = 51/101 (50%), Positives = 61/101 (59%), Gaps = 3/101 (2%)
Frame = -2
Query: 513 NLNLPSFAIFHGDVGVSPRVFRRTVTNVGLPKSTYKAKVITPSLLEIPVKPDVLSFTSIG 334
NLN PS + S F RTVTNVG STYKAK+ L I V+P LSF + G
Sbjct: 586 NLNYPSMSAKVSASSSSDITFSRTVTNVGEKGSTYKAKLSGNPKLSIKVEPATLSFKAPG 645
Query: 333 PKKSFSVVVEG---ALTVNVISATLVWDDGNFPVRSPIVVY 220
KKSF+V V G A N++SA+L+W DG+ VRSPIVVY
Sbjct: 646 EKKSFTVTVSGKSLAGISNIVSASLIWSDGSHNVRSPIVVY 686
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 461,823,422
Number of Sequences: 1393205
Number of extensions: 10262479
Number of successful extensions: 26850
Number of sequences better than 10.0: 142
Number of HSP's better than 10.0 without gapping: 26040
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26766
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16154357632
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
