Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000383A_C01 KMC000383A_c01
(652 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC12987.1| ubiquitin activating enzyme E1 [Cicer arietinum] 272 2e-72
pir||T03964 probable ubiquitin-protein ligase (EC 6.3.2.19) - co... 268 6e-71
sp|P31251|UBA2_WHEAT Ubiquitin-activating enzyme E1 2 gi|170684|... 261 6e-69
sp|P20973|UBA1_WHEAT Ubiquitin-activating enzyme E1 1 gi|100841|... 261 6e-69
ref|NP_565693.1| ubiquitin activating enzyme 1 (UBA1); protein i... 250 1e-65
>emb|CAC12987.1| ubiquitin activating enzyme E1 [Cicer arietinum]
Length = 173
Score = 272 bits (696), Expect = 2e-72
Identities = 130/148 (87%), Positives = 139/148 (93%)
Frame = -2
Query: 651 TGLVFLELYKALAGGHKVEDYRNTFANLALPLFSMAEPVPPKIIKHQDMSWTVWDRWIIR 472
TGLV LELYK L GGHK+EDYRNTFANLALPLFS+AEPVP KIIKHQD+SWTVWDRWIIR
Sbjct: 26 TGLVCLELYKVLDGGHKLEDYRNTFANLALPLFSIAEPVPAKIIKHQDLSWTVWDRWIIR 85
Query: 471 ENLTLRELLDWLKAKGLHAYSISYGSCLLFNSMFPRHKERMDRKVVDLATEVAKAEIPSY 292
N TLRELLDWLKAKGL+AYSIS GSCLL+NSMFPRHKERMD+KVVDLA +VAK EIPSY
Sbjct: 86 NNPTLRELLDWLKAKGLNAYSISCGSCLLYNSMFPRHKERMDKKVVDLAKDVAKMEIPSY 145
Query: 291 RRHLDVVVACEDDEDNDIDIPQVSIYFR 208
RRH+DVVVACEDD+DNDIDIPQVSIYFR
Sbjct: 146 RRHIDVVVACEDDDDNDIDIPQVSIYFR 173
>pir||T03964 probable ubiquitin-protein ligase (EC 6.3.2.19) - common tobacco
gi|1808656|emb|CAA71762.1| Ubiquitin activating enzyme E1
[Nicotiana tabacum]
Length = 1080
Score = 268 bits (684), Expect = 6e-71
Identities = 122/148 (82%), Positives = 139/148 (93%)
Frame = -2
Query: 651 TGLVFLELYKALAGGHKVEDYRNTFANLALPLFSMAEPVPPKIIKHQDMSWTVWDRWIIR 472
TGLV LELYK L GGHKVEDYRNTFANLALPLFSMAEPVPPK++KHQDM+WTVWDRWI++
Sbjct: 933 TGLVCLELYKVLDGGHKVEDYRNTFANLALPLFSMAEPVPPKVVKHQDMNWTVWDRWILK 992
Query: 471 ENLTLRELLDWLKAKGLHAYSISYGSCLLFNSMFPRHKERMDRKVVDLATEVAKAEIPSY 292
+N TLRELL WL+ KGL+AYSISYGSCLL+NSMFP+HKERMDRK+VDLA EVAKA++P Y
Sbjct: 993 DNPTLRELLQWLQNKGLNAYSISYGSCLLYNSMFPKHKERMDRKLVDLAREVAKADLPPY 1052
Query: 291 RRHLDVVVACEDDEDNDIDIPQVSIYFR 208
R+H DVVVACED+EDND+DIPQ+SIYFR
Sbjct: 1053 RKHFDVVVACEDEEDNDVDIPQMSIYFR 1080
>sp|P31251|UBA2_WHEAT Ubiquitin-activating enzyme E1 2 gi|170684|gb|AAA34265.1| ubiquitin
activating enyme
Length = 1051
Score = 261 bits (667), Expect = 6e-69
Identities = 121/148 (81%), Positives = 137/148 (91%)
Frame = -2
Query: 651 TGLVFLELYKALAGGHKVEDYRNTFANLALPLFSMAEPVPPKIIKHQDMSWTVWDRWIIR 472
TGLV LELYKALAGGHKVEDYRNTFANLA+PLFS+AEPVPPK IKHQ++SWTVWDRW +
Sbjct: 904 TGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVT 963
Query: 471 ENLTLRELLDWLKAKGLHAYSISYGSCLLFNSMFPRHKERMDRKVVDLATEVAKAEIPSY 292
N+TLRELL+WLK KGL+AYSIS G+ LL+NSMFPRHKER+DRKVVD+A EVAK E+PSY
Sbjct: 964 GNITLRELLEWLKEKGLNAYSISCGTSLLYNSMFPRHKERLDRKVVDVAREVAKMEVPSY 1023
Query: 291 RRHLDVVVACEDDEDNDIDIPQVSIYFR 208
RRHLDVVVACEDD+DND+DIP VS+YFR
Sbjct: 1024 RRHLDVVVACEDDDDNDVDIPLVSVYFR 1051
>sp|P20973|UBA1_WHEAT Ubiquitin-activating enzyme E1 1 gi|100841|pir||A38373
ubiquitin-protein ligase (EC 6.3.2.19) E1 - wheat
gi|170780|gb|AAA34308.1| ubiquitin-activating enzyme E1
Length = 1051
Score = 261 bits (667), Expect = 6e-69
Identities = 121/148 (81%), Positives = 137/148 (91%)
Frame = -2
Query: 651 TGLVFLELYKALAGGHKVEDYRNTFANLALPLFSMAEPVPPKIIKHQDMSWTVWDRWIIR 472
TGLV LELYKALAGGHKVEDYRNTFANLA+PLFS+AEPVPPK IKHQ++SWTVWDRW +
Sbjct: 904 TGLVCLELYKALAGGHKVEDYRNTFANLAIPLFSIAEPVPPKTIKHQELSWTVWDRWTVT 963
Query: 471 ENLTLRELLDWLKAKGLHAYSISYGSCLLFNSMFPRHKERMDRKVVDLATEVAKAEIPSY 292
N+TLRELL+WLK KGL+AYSIS G+ LL+NSMFPRHKER+DRKVVD+A EVAK E+PSY
Sbjct: 964 GNITLRELLEWLKEKGLNAYSISCGTSLLYNSMFPRHKERLDRKVVDVAREVAKMEVPSY 1023
Query: 291 RRHLDVVVACEDDEDNDIDIPQVSIYFR 208
RRHLDVVVACEDD+DND+DIP VS+YFR
Sbjct: 1024 RRHLDVVVACEDDDDNDVDIPLVSVYFR 1051
>ref|NP_565693.1| ubiquitin activating enzyme 1 (UBA1); protein id: At2g30110.1,
supported by cDNA: gi_19699086 [Arabidopsis thaliana]
gi|7437978|pir||T00587 probable ubiquitin-protein ligase
(EC 6.3.2.19) - Arabidopsis thaliana
gi|1750376|gb|AAB39246.1| ubiquitin activating enzyme
[Arabidopsis thaliana] gi|3150409|gb|AAC16961.1|
ubiquitin activating enzyme 1 (UBA1) [Arabidopsis
thaliana]
Length = 1080
Score = 250 bits (639), Expect = 1e-65
Identities = 116/148 (78%), Positives = 132/148 (88%)
Frame = -2
Query: 651 TGLVFLELYKALAGGHKVEDYRNTFANLALPLFSMAEPVPPKIIKHQDMSWTVWDRWIIR 472
TGLV LELYK L GGHKVE YRNTFANLALPLFSMAEP+PPK++KH+DM+WTVWDRW+++
Sbjct: 933 TGLVCLELYKVLDGGHKVEAYRNTFANLALPLFSMAEPLPPKVVKHRDMAWTVWDRWVLK 992
Query: 471 ENLTLRELLDWLKAKGLHAYSISYGSCLLFNSMFPRHKERMDRKVVDLATEVAKAEIPSY 292
N TLRE+L WL+ KGL AYSIS GSCLLFNSMF RHKERMD+KVVDLA +VAK E+P Y
Sbjct: 993 GNPTLREVLQWLEDKGLSAYSISCGSCLLFNSMFTRHKERMDKKVVDLARDVAKVELPPY 1052
Query: 291 RRHLDVVVACEDDEDNDIDIPQVSIYFR 208
R HLDVVVACED++DND+DIP VSIYFR
Sbjct: 1053 RNHLDVVVACEDEDDNDVDIPLVSIYFR 1080
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 583,625,738
Number of Sequences: 1393205
Number of extensions: 13063938
Number of successful extensions: 34349
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 32983
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34273
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 27860523586
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
