Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000382A_C03 KMC000382A_c03
(749 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T51861 hypothetical protein [imported] - soybean (fragment)... 206 2e-52
ref|NP_194282.1| putative protein; protein id: At4g25520.1 [Arab... 70 4e-11
pir||H85294 hypothetical protein AT4g25520 [imported] - Arabidop... 70 4e-11
ref|NP_680741.1| hypothetical protein; protein id: At4g25515.1 [... 60 4e-08
ref|NP_201015.1| putative protein; protein id: At5g62090.1, supp... 58 2e-07
>pir||T51861 hypothetical protein [imported] - soybean (fragment)
gi|3832528|gb|AAC70787.1| unknown [Glycine max]
Length = 426
Score = 206 bits (525), Expect = 2e-52
Identities = 107/154 (69%), Positives = 128/154 (82%), Gaps = 1/154 (0%)
Frame = -2
Query: 748 QRSLSANSILQQGHSQGSQANQALQQQMIQQLLQEMSHSNGGMQPQSLGGSNGNGNMAKN 569
Q SLSAN++LQQ HSQGSQ NQALQQQMI QLLQEMS++NGG+QPQSLGG + NMAKN
Sbjct: 277 QPSLSANALLQQNHSQGSQGNQALQQQMIHQLLQEMSNNNGGVQPQSLGGP--SANMAKN 334
Query: 568 GGVGFGGQTLRVAGDTSNVSGSNGPVPSRSNSFKAASNSDSSAAGGNNGFNQRTSDMPQN 389
+GFGG ++G ++NV+G+NGP+ SR+NSFK +NSDSSAAGGNNG NQRTS+MPQN
Sbjct: 335 -ALGFGGHYPSLSGGSANVTGNNGPM-SRNNSFKTTANSDSSAAGGNNGLNQRTSEMPQN 392
Query: 388 LHLPEDV-DIGNDFMDSSFFNSDLDDNMGYSWKA 290
LHL + V DIGN+F D+ F NSDLDDNMG+ WKA
Sbjct: 393 LHLQDVVQDIGNEFTDNPFLNSDLDDNMGFGWKA 426
>ref|NP_194282.1| putative protein; protein id: At4g25520.1 [Arabidopsis thaliana]
gi|7486811|pir||T05795 hypothetical protein M7J2.110 -
Arabidopsis thaliana gi|2980798|emb|CAA18174.1| putative
protein [Arabidopsis thaliana]
Length = 748
Score = 69.7 bits (169), Expect = 4e-11
Identities = 51/136 (37%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Frame = -2
Query: 721 LQQGHSQGSQANQALQQQMIQQLLQEMSHSNGGMQPQSL--GGSNGNGNMAKNGGVGFGG 548
LQ HS G+ +QQM+ QLLQEMS + G +Q Q G S N N +N
Sbjct: 643 LQSPHSHGNTP----EQQMLHQLLQEMSENGGSVQQQQAFSGQSGSNSNAERN------- 691
Query: 547 QTLRVAGDTSNVSGSNGPVPSRSNSFKAASNSDSSAAGGNNGFNQRTSDMPQNLHLPEDV 368
TSN+SG G PSR+NSFKAASN+ NLH ED+
Sbjct: 692 ----TTASTSNISGG-GRAPSRNNSFKAASNN--------------------NLHFSEDI 726
Query: 367 DI-GNDFMDSSFFNSD 323
I +DF + FFN++
Sbjct: 727 SITDHDFSEDGFFNNN 742
>pir||H85294 hypothetical protein AT4g25520 [imported] - Arabidopsis thaliana
gi|7269402|emb|CAB81362.1| putative protein [Arabidopsis
thaliana]
Length = 748
Score = 69.7 bits (169), Expect = 4e-11
Identities = 51/136 (37%), Positives = 65/136 (47%), Gaps = 3/136 (2%)
Frame = -2
Query: 721 LQQGHSQGSQANQALQQQMIQQLLQEMSHSNGGMQPQSL--GGSNGNGNMAKNGGVGFGG 548
LQ HS G+ +QQM+ QLLQEMS + G +Q Q G S N N +N
Sbjct: 643 LQSPHSHGNTP----EQQMLHQLLQEMSENGGSVQQQQAFSGQSGSNSNAERN------- 691
Query: 547 QTLRVAGDTSNVSGSNGPVPSRSNSFKAASNSDSSAAGGNNGFNQRTSDMPQNLHLPEDV 368
TSN+SG G PSR+NSFKAASN+ NLH ED+
Sbjct: 692 ----TTASTSNISGG-GRAPSRNNSFKAASNN--------------------NLHFSEDI 726
Query: 367 DI-GNDFMDSSFFNSD 323
I +DF + FFN++
Sbjct: 727 SITDHDFSEDGFFNNN 742
>ref|NP_680741.1| hypothetical protein; protein id: At4g25515.1 [Arabidopsis
thaliana]
Length = 601
Score = 59.7 bits (143), Expect = 4e-08
Identities = 46/135 (34%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Frame = -2
Query: 721 LQQGHSQGSQANQALQQQMIQQLLQEMSHSNGGMQPQSL--GGSNGNGNMAKNGGVGFGG 548
LQ HS G+ +QQM+ QLLQEM+ + ++ Q G S N N +N
Sbjct: 496 LQSPHSHGNTQ----EQQMLHQLLQEMTENGASVEQQQAFPGQSGSNNNTERN------- 544
Query: 547 QTLRVAGDTSNVSGSNGPVPSRSNSFKAASNSDSSAAGGNNGFNQRTSDMPQNLHLPEDV 368
TSN+SG G VPSR NSFKA+SN+ NL ED+
Sbjct: 545 ----TTASTSNISGG-GRVPSRINSFKASSNN--------------------NLPFSEDI 579
Query: 367 DI-GNDFMDSSFFNS 326
+ +DF + FFN+
Sbjct: 580 SVTDHDFSEDGFFNN 594
>ref|NP_201015.1| putative protein; protein id: At5g62090.1, supported by cDNA:
gi_14532713 [Arabidopsis thaliana]
gi|14532714|gb|AAK64158.1| unknown protein [Arabidopsis
thaliana] gi|23297578|gb|AAN12899.1| unknown protein
[Arabidopsis thaliana]
Length = 816
Score = 57.8 bits (138), Expect = 2e-07
Identities = 51/160 (31%), Positives = 72/160 (44%), Gaps = 9/160 (5%)
Frame = -2
Query: 742 SLSANSILQQGHSQG---SQANQALQQQMIQQLLQEMSHSNG--GMQPQSLGGS---NGN 587
S S N QQ H Q S NQ L+QQMI Q+ Q+M++SNG G Q QSL G N N
Sbjct: 689 SSSYNGSTQQYHQQPPSCSSGNQTLEQQMIHQIWQQMANSNGGSGQQQQSLSGQNMMNCN 748
Query: 586 GNMAKNGGVGFGGQTLRVAGDTSNVSGSNGPVPSRSNSFKAASNSDSSAAGGNNGFNQRT 407
NM +N ++ + PS SN F+ D S Q
Sbjct: 749 TNMGRN---------------RTDYVPAAAETPSTSNRFRGIKGLDQS---------QNL 784
Query: 406 SDMPQNLHLPEDVDIGNDFMDSSFFNSDLDDNM-GYSWKA 290
+ N L +F ++ F++++D++M GYSWK+
Sbjct: 785 EGIISNTSL--------NFGNNGVFSNEVDESMGGYSWKS 816
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 666,264,576
Number of Sequences: 1393205
Number of extensions: 15986410
Number of successful extensions: 80901
Number of sequences better than 10.0: 755
Number of HSP's better than 10.0 without gapping: 55459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73047
length of database: 448,689,247
effective HSP length: 120
effective length of database: 281,504,647
effective search space used: 36314099463
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
