Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000378A_C01 KMC000378A_c01
(521 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_680176.1| Expressed protein; protein id: At5g21105.1 [Ara... 190 7e-48
gb|AAK91422.1| AT5g21100/T10F18_130 [Arabidopsis thaliana] gi|24... 190 7e-48
pir||T44928 L-ascorbate oxidase (EC 1.10.3.3) [imported] - Arabi... 190 7e-48
emb|CAA75577.1| L-ascorbate oxidase [Medicago truncatula] 187 5e-47
gb|AAM94614.1| ascorbate oxidase precursor [Glycine max] 187 8e-47
>ref|NP_680176.1| Expressed protein; protein id: At5g21105.1 [Arabidopsis thaliana]
Length = 571
Score = 190 bits (483), Expect = 7e-48
Identities = 81/127 (63%), Positives = 99/127 (77%)
Frame = -1
Query: 521 VDVVLQNTNILERIKRSDFHPWHLHGHDFWILGYGDGMFKPGDDETKFNLENPPLRNNAV 342
VDV++QN N+L+ I S+ HPWHLHGHDFW+LGYGDG FKPG DE +NL+NPPLRN A+
Sbjct: 446 VDVIIQNANVLKGIV-SEIHPWHLHGHDFWVLGYGDGKFKPGIDEKTYNLKNPPLRNTAI 504
Query: 341 LFPYGWTALRFKANNPGVWAFHCHVEPHLHMGMGVVFAEAVENVEGIPWETLACGLFRGI 162
L+PYGWTA+RF +NPGVW FHCH+EPHLHMGMGVVFAE + + +P E L CGL +
Sbjct: 505 LYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVPDEALGCGLTKQF 564
Query: 161 S*RKNIN 141
+N N
Sbjct: 565 LMNRNRN 571
>gb|AAK91422.1| AT5g21100/T10F18_130 [Arabidopsis thaliana]
gi|24111409|gb|AAN46839.1| At5g21100/T10F18_130
[Arabidopsis thaliana]
Length = 530
Score = 190 bits (483), Expect = 7e-48
Identities = 81/127 (63%), Positives = 99/127 (77%)
Frame = -1
Query: 521 VDVVLQNTNILERIKRSDFHPWHLHGHDFWILGYGDGMFKPGDDETKFNLENPPLRNNAV 342
VDV++QN N+L+ I S+ HPWHLHGHDFW+LGYGDG FKPG DE +NL+NPPLRN A+
Sbjct: 405 VDVIIQNANVLKGIV-SEIHPWHLHGHDFWVLGYGDGKFKPGIDEKTYNLKNPPLRNTAI 463
Query: 341 LFPYGWTALRFKANNPGVWAFHCHVEPHLHMGMGVVFAEAVENVEGIPWETLACGLFRGI 162
L+PYGWTA+RF +NPGVW FHCH+EPHLHMGMGVVFAE + + +P E L CGL +
Sbjct: 464 LYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVPDEALGCGLTKQF 523
Query: 161 S*RKNIN 141
+N N
Sbjct: 524 LMNRNRN 530
>pir||T44928 L-ascorbate oxidase (EC 1.10.3.3) [imported] - Arabidopsis thaliana
(fragment) gi|2208903|dbj|BAA20519.1| ascorbate oxidase
[Arabidopsis thaliana]
Length = 567
Score = 190 bits (483), Expect = 7e-48
Identities = 81/127 (63%), Positives = 99/127 (77%)
Frame = -1
Query: 521 VDVVLQNTNILERIKRSDFHPWHLHGHDFWILGYGDGMFKPGDDETKFNLENPPLRNNAV 342
VDV++QN N+L+ I S+ HPWHLHGHDFW+LGYGDG FKPG DE +NL+NPPLRN A+
Sbjct: 442 VDVIIQNANVLKGIV-SEIHPWHLHGHDFWVLGYGDGKFKPGIDEKTYNLKNPPLRNTAI 500
Query: 341 LFPYGWTALRFKANNPGVWAFHCHVEPHLHMGMGVVFAEAVENVEGIPWETLACGLFRGI 162
L+PYGWTA+RF +NPGVW FHCH+EPHLHMGMGVVFAE + + +P E L CGL +
Sbjct: 501 LYPYGWTAIRFVTDNPGVWFFHCHIEPHLHMGMGVVFAEGLNRIGKVPDEALGCGLTKQF 560
Query: 161 S*RKNIN 141
+N N
Sbjct: 561 LMNRNRN 567
>emb|CAA75577.1| L-ascorbate oxidase [Medicago truncatula]
Length = 569
Score = 187 bits (476), Expect = 5e-47
Identities = 83/116 (71%), Positives = 92/116 (78%)
Frame = -1
Query: 521 VDVVLQNTNILERIKRSDFHPWHLHGHDFWILGYGDGMFKPGDDETKFNLENPPLRNNAV 342
VDV+LQN N L S+ HPWHLHGHDFW+LGYG+G F+PG DE FNL PLRN AV
Sbjct: 450 VDVILQNANQLNG-NGSEIHPWHLHGHDFWVLGYGEGRFRPGVDERSFNLTRAPLRNTAV 508
Query: 341 LFPYGWTALRFKANNPGVWAFHCHVEPHLHMGMGVVFAEAVENVEGIPWETLACGL 174
+FPYGWTALRFKA+NPGVWAFHCH+EPHLHMGMGV+FAEAV V IP E L C L
Sbjct: 509 IFPYGWTALRFKADNPGVWAFHCHIEPHLHMGMGVIFAEAVHKVRNIPKEALKCVL 564
>gb|AAM94614.1| ascorbate oxidase precursor [Glycine max]
Length = 429
Score = 187 bits (474), Expect = 8e-47
Identities = 84/116 (72%), Positives = 95/116 (81%)
Frame = -1
Query: 521 VDVVLQNTNILERIKRSDFHPWHLHGHDFWILGYGDGMFKPGDDETKFNLENPPLRNNAV 342
VDV+LQN+N L + S+ HPWHLHGHDFW+LGYG+G FK GD E KFNL + PLRN AV
Sbjct: 305 VDVILQNSNQLS-VNGSEIHPWHLHGHDFWVLGYGEGKFKLGD-EKKFNLTHAPLRNTAV 362
Query: 341 LFPYGWTALRFKANNPGVWAFHCHVEPHLHMGMGVVFAEAVENVEGIPWETLACGL 174
+FPYGWTALRFKA+NPGVWAFHCH+EPHLHMGMGV+FAE V V IP E L CGL
Sbjct: 363 IFPYGWTALRFKADNPGVWAFHCHIEPHLHMGMGVIFAEGVHKVGKIPREALTCGL 418
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 505,770,701
Number of Sequences: 1393205
Number of extensions: 11838677
Number of successful extensions: 32540
Number of sequences better than 10.0: 419
Number of HSP's better than 10.0 without gapping: 29876
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32190
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16731298976
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
