Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000371A_C01 KMC000371A_c01
(560 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB03629.1| putative protein kinase Xa21 [Oryza sativa (japo... 82 3e-15
dbj|BAB03621.1| putative protein kinase Xa21 [Oryza sativa (japo... 80 2e-14
dbj|BAB03631.1| putative protein kinase Xa21 [Oryza sativa (japo... 78 7e-14
pir||A57676 protein kinase Xa21 (EC 2.7.1.-), receptor type prec... 76 3e-13
ref|NP_190295.1| leucine-rich repeat transmembrane protein kinas... 75 7e-13
>dbj|BAB03629.1| putative protein kinase Xa21 [Oryza sativa (japonica cultivar-group)]
gi|13872945|dbj|BAB44050.1| putative protein kinase Xa21
[Oryza sativa (japonica cultivar-group)]
Length = 1047
Score = 82.4 bits (202), Expect = 3e-15
Identities = 44/127 (34%), Positives = 72/127 (56%)
Frame = -2
Query: 553 GDVYSFGILLLEMFIAQRPTDEMFKEGLSLNKFVSAMHENQVLNMVDQRLINEYEHPTRS 374
GD+YS GILLLE+F + PTD+MFK+ + L+KF SA +VL++ D+ + E
Sbjct: 930 GDIYSLGILLLEIFTGRSPTDDMFKDSVDLHKFASAAFPGRVLDIADRTIWLHEE----- 984
Query: 373 SSTSYDSSGGSIDNSYNNDNTHWVRKAEECVAAVMRVALSCATHHPKDRWTMTEALTKLH 194
+ + D + SI S ++C+ +V+R+ +SC+ KDR + +A++K+H
Sbjct: 985 -AKNKDITDASITRSI----------VQDCLVSVLRLGISCSKQQAKDRMLLADAVSKMH 1033
Query: 193 GIRQSML 173
IR L
Sbjct: 1034 AIRDEYL 1040
>dbj|BAB03621.1| putative protein kinase Xa21 [Oryza sativa (japonica cultivar-group)]
gi|13872937|dbj|BAB44042.1| putative protein kinase Xa21
[Oryza sativa (japonica cultivar-group)]
Length = 1065
Score = 80.1 bits (196), Expect = 2e-14
Identities = 45/128 (35%), Positives = 67/128 (52%), Gaps = 3/128 (2%)
Frame = -2
Query: 559 THGDVYSFGILLLEMFIAQRPTDEMFKEGLSLNKFVSAMHENQVLNMVDQRL---INEYE 389
T GDVYS GILLLEMF PTD+MF++ L L+ F A H +++L + D L ++ +
Sbjct: 934 TLGDVYSLGILLLEMFTGMSPTDDMFRDSLDLHSFSEAAHPDRILEIADPTLWVHVDAED 993
Query: 388 HPTRSSSTSYDSSGGSIDNSYNNDNTHWVRKAEECVAAVMRVALSCATHHPKDRWTMTEA 209
TRS + +EC+ +V+ + LSC+ H PK+R + +A
Sbjct: 994 SITRS-------------------------RMQECLISVIGLGLSCSKHQPKERMPIQDA 1028
Query: 208 LTKLHGIR 185
K+H IR
Sbjct: 1029 ALKMHAIR 1036
>dbj|BAB03631.1| putative protein kinase Xa21 [Oryza sativa (japonica cultivar-group)]
gi|13872947|dbj|BAB44052.1| putative protein kinase Xa21
[Oryza sativa (japonica cultivar-group)]
Length = 1070
Score = 78.2 bits (191), Expect = 7e-14
Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 1/128 (0%)
Frame = -2
Query: 553 GDVYSFGILLLEMFIAQRPTDEMFKEGLSLNKFVSAMHENQVLNMVDQRL-INEYEHPTR 377
GD YS GILLLEMF + PTD++F++ + L+KFV+A +N+ D+ + ++E + T
Sbjct: 947 GDTYSLGILLLEMFNGRSPTDDIFRDSMDLHKFVAASFLESAMNIADRTIWLHEEANDTD 1006
Query: 376 SSSTSYDSSGGSIDNSYNNDNTHWVRKAEECVAAVMRVALSCATHHPKDRWTMTEALTKL 197
++ S R ++C+ +V+R+ LSC+ P+DR + +A +++
Sbjct: 1007 GTNASTKR-----------------RIIQQCLVSVLRLGLSCSKQQPRDRMLLPDAASEI 1049
Query: 196 HGIRQSML 173
H IR L
Sbjct: 1050 HAIRDEYL 1057
>pir||A57676 protein kinase Xa21 (EC 2.7.1.-), receptor type precursor - rice
gi|1122443|gb|AAC49123.1| receptor kinase-like protein
gi|2586085|gb|AAC80225.1| receptor kinase-like protein
[Oryza longistaminata] gi|1586408|prf||2203451A receptor
kinase-like protein
Length = 1025
Score = 75.9 bits (185), Expect = 3e-13
Identities = 41/131 (31%), Positives = 69/131 (52%)
Frame = -2
Query: 559 THGDVYSFGILLLEMFIAQRPTDEMFKEGLSLNKFVSAMHENQVLNMVDQRLINEYEHPT 380
THGD+YS+GIL+LE+ +RPTD F+ L L ++V +V ++VD +LI + E
Sbjct: 902 THGDIYSYGILVLEIVTGKRPTDSTFRPDLGLRQYVELGLHGRVTDVVDTKLILDSE--- 958
Query: 379 RSSSTSYDSSGGSIDNSYNNDNTHWVRKAEECVAAVMRVALSCATHHPKDRWTMTEALTK 200
N N+ N R+ EC+ ++R+ LSC+ P R + + +
Sbjct: 959 ---------------NWLNSTNNSPCRRITECIVWLLRLGLSCSQELPSSRTPTGDIIDE 1003
Query: 199 LHGIRQSMLGI 167
L+ I+Q++ G+
Sbjct: 1004 LNAIKQNLSGL 1014
>ref|NP_190295.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At3g47110.1 [Arabidopsis thaliana]
gi|11260270|pir||T45647 receptor protein kinase-like
protein - Arabidopsis thaliana gi|6522592|emb|CAB61957.1|
receptor protein kinase-like protein [Arabidopsis
thaliana]
Length = 1025
Score = 74.7 bits (182), Expect = 7e-13
Identities = 44/126 (34%), Positives = 70/126 (54%), Gaps = 1/126 (0%)
Frame = -2
Query: 553 GDVYSFGILLLEMFIAQRPTDEMFKEGLSLNKFV-SAMHENQVLNMVDQRLINEYEHPTR 377
GDVYSFGI+LLE+F +RPT+++F +GL+L+ F SA+ + Q L++ D+ ++
Sbjct: 919 GDVYSFGIVLLEIFTGKRPTNKLFVDGLTLHSFTKSALQKRQALDITDETILR------- 971
Query: 376 SSSTSYDSSGGSIDNSYNNDNTHWVRKAEECVAAVMRVALSCATHHPKDRWTMTEALTKL 197
G+ +N EC+ V RV +SC+ P +R +M EA++KL
Sbjct: 972 ----------GAYAQHFN---------MVECLTLVFRVGVSCSEESPVNRISMAEAISKL 1012
Query: 196 HGIRQS 179
IR+S
Sbjct: 1013 VSIRES 1018
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 460,455,705
Number of Sequences: 1393205
Number of extensions: 9103043
Number of successful extensions: 27005
Number of sequences better than 10.0: 418
Number of HSP's better than 10.0 without gapping: 25340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26890
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 20095422690
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
