Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000368A_C01 KMC000368A_c01
(525 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_192209.1| putative protein; protein id: At4g03000.1 [Arab... 112 8e-28
ref|NP_171836.1| unknown protein; protein id: At1g03370.1 [Arabi... 105 4e-25
pir||D86165 protein F15K9.3 [imported] - Arabidopsis thaliana gi... 105 4e-25
gb|AAM97032.1| unknown protein [Arabidopsis thaliana] gi|2319794... 70 6e-14
ref|NP_181076.1| unknown protein; protein id: At2g35330.1 [Arabi... 70 6e-14
>ref|NP_192209.1| putative protein; protein id: At4g03000.1 [Arabidopsis thaliana]
gi|7484811|pir||T01393 apoptosis inhibitor homolog
T4I9.12 - Arabidopsis thaliana gi|3924605|gb|AAC79106.1|
putative inhibitor of apoptosis [Arabidopsis thaliana]
gi|7269785|emb|CAB77785.1| putative protein [Arabidopsis
thaliana]
Length = 864
Score = 112 bits (280), Expect(2) = 8e-28
Identities = 60/117 (51%), Positives = 79/117 (67%), Gaps = 7/117 (5%)
Frame = -3
Query: 523 IKLKAEKNWQKYRDDICKLEKEISLLRLKSDSSKIAALRKGIDGCYASRCMDMKNDTSFI 344
IK KAE + + Y ++I +L+ EIS L+LKSDS KIAAL+KGIDG M + T+
Sbjct: 725 IKTKAENDVKYYIENIKRLDTEISKLKLKSDSLKIAALKKGIDGNNDGNKSGMNHTTNTK 784
Query: 343 SELVIGYSM-------TGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQ 194
+ + + +KRERECVMCLSEEMSV+FLPCAHQV+C+ CN+LHEK+
Sbjct: 785 ANSMASAKVWENNQGAESKIKRERECVMCLSEEMSVIFLPCAHQVLCSKCNQLHEKE 841
Score = 32.7 bits (73), Expect(2) = 8e-28
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = -1
Query: 195 KALLDCPSCRSPIQQRIAVRF 133
+A+ DCPSCR+ IQ+RI RF
Sbjct: 841 EAMEDCPSCRAKIQRRIQARF 861
>ref|NP_171836.1| unknown protein; protein id: At1g03370.1 [Arabidopsis thaliana]
Length = 1859
Score = 105 bits (261), Expect(2) = 4e-25
Identities = 59/111 (53%), Positives = 76/111 (68%)
Frame = -3
Query: 523 IKLKAEKNWQKYRDDICKLEKEISLLRLKSDSSKIAALRKGIDGCYASRCMDMKNDTSFI 344
IK KAE + + Y D+I +LE+EIS L+LKSD S+I AL+KG +S K ++ +
Sbjct: 705 IKGKAETDVKYYIDNIKRLEREISELKLKSDYSRIIALKKG-----SSESKATKRESLGM 759
Query: 343 SELVIGYSMTGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQG 191
+ VKRERECVMCLSEEMSV+FLPCAHQV+C CN+LHEK+G
Sbjct: 760 PK----------VKRERECVMCLSEEMSVIFLPCAHQVLCFKCNQLHEKEG 800
Score = 30.8 bits (68), Expect(2) = 4e-25
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 195 KALLDCPSCRSPIQQRIAVRF 133
+ ++DCPSCR I +RI RF
Sbjct: 799 EGMMDCPSCRGTIHRRIQARF 819
>pir||D86165 protein F15K9.3 [imported] - Arabidopsis thaliana
gi|3850566|gb|AAC72106.1| F15K9.3 [Arabidopsis thaliana]
Length = 823
Score = 105 bits (261), Expect(2) = 4e-25
Identities = 59/111 (53%), Positives = 76/111 (68%)
Frame = -3
Query: 523 IKLKAEKNWQKYRDDICKLEKEISLLRLKSDSSKIAALRKGIDGCYASRCMDMKNDTSFI 344
IK KAE + + Y D+I +LE+EIS L+LKSD S+I AL+KG +S K ++ +
Sbjct: 705 IKGKAETDVKYYIDNIKRLEREISELKLKSDYSRIIALKKG-----SSESKATKRESLGM 759
Query: 343 SELVIGYSMTGGVKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQG 191
+ VKRERECVMCLSEEMSV+FLPCAHQV+C CN+LHEK+G
Sbjct: 760 PK----------VKRERECVMCLSEEMSVIFLPCAHQVLCFKCNQLHEKEG 800
Score = 30.8 bits (68), Expect(2) = 4e-25
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = -1
Query: 195 KALLDCPSCRSPIQQRIAVRF 133
+ ++DCPSCR I +RI RF
Sbjct: 799 EGMMDCPSCRGTIHRRIQARF 819
>gb|AAM97032.1| unknown protein [Arabidopsis thaliana] gi|23197948|gb|AAN15501.1|
unknown protein [Arabidopsis thaliana]
Length = 738
Score = 69.7 bits (169), Expect(2) = 6e-14
Identities = 41/118 (34%), Positives = 70/118 (58%), Gaps = 5/118 (4%)
Frame = -3
Query: 523 IKLKAEKNWQKYRDDICKLEKEISLLRLKSDSSKIAALRKGIDGCYASRCMDMKNDTSFI 344
++LK E ++Q+++DD+ +LE+E+S RL SS ++L+ + K +T +
Sbjct: 605 LRLKIEIDFQRHKDDLQRLEQELS--RLNKASSTDSSLQSNNTSHTKVKSDKSKGET--M 660
Query: 343 SELVIGYSMTGG-----VKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGTA 185
S+L+ + G +REC++C+ +E+SVVFLPCAHQVVC +C++ G A
Sbjct: 661 SKLLEELNRLDGSYEKEANYDRECLICMKDEVSVVFLPCAHQVVCASCSDSFMGSGKA 718
Score = 28.5 bits (62), Expect(2) = 6e-14
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1
Query: 180 CPSCRSPIQQRIAV 139
CP CR+P+QQRI V
Sbjct: 720 CPCCRAPVQQRIRV 733
>ref|NP_181076.1| unknown protein; protein id: At2g35330.1 [Arabidopsis thaliana]
gi|25408371|pir||C84767 hypothetical protein At2g35330
[imported] - Arabidopsis thaliana
gi|3608154|gb|AAC36187.1| unknown protein [Arabidopsis
thaliana]
Length = 711
Score = 69.7 bits (169), Expect(2) = 6e-14
Identities = 41/118 (34%), Positives = 70/118 (58%), Gaps = 5/118 (4%)
Frame = -3
Query: 523 IKLKAEKNWQKYRDDICKLEKEISLLRLKSDSSKIAALRKGIDGCYASRCMDMKNDTSFI 344
++LK E ++Q+++DD+ +LE+E+S RL SS ++L+ + K +T +
Sbjct: 578 LRLKIEIDFQRHKDDLQRLEQELS--RLNKASSTDSSLQSNNTSHTKVKSDKSKGET--M 633
Query: 343 SELVIGYSMTGG-----VKRERECVMCLSEEMSVVFLPCAHQVVCTTCNELHEKQGTA 185
S+L+ + G +REC++C+ +E+SVVFLPCAHQVVC +C++ G A
Sbjct: 634 SKLLEELNRLDGSYEKEANYDRECLICMKDEVSVVFLPCAHQVVCASCSDSFMGSGKA 691
Score = 28.5 bits (62), Expect(2) = 6e-14
Identities = 10/14 (71%), Positives = 12/14 (85%)
Frame = -1
Query: 180 CPSCRSPIQQRIAV 139
CP CR+P+QQRI V
Sbjct: 693 CPCCRAPVQQRIRV 706
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 429,799,460
Number of Sequences: 1393205
Number of extensions: 8918877
Number of successful extensions: 26511
Number of sequences better than 10.0: 299
Number of HSP's better than 10.0 without gapping: 25271
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26488
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 17019769648
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
