Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000366A_C01 KMC000366A_c01
(553 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL66291.1|AF452451_1 cysteine synthase [Glycine max] 119 3e-26
sp|Q43317|CYSK_CITLA Cysteine synthase (O-acetylserine sulfhydry... 117 9e-26
emb|CAA06819.1| cysteine synthase, O-acetyl-L-serine (thiol)-lya... 117 9e-26
sp|O81154|CYSK_SOLTU Cysteine synthase (O-acetylserine sulfhydry... 114 6e-25
dbj|BAB20861.1| cytosolic cysteine synthase [Solanum tuberosum] 114 6e-25
>gb|AAL66291.1|AF452451_1 cysteine synthase [Glycine max]
Length = 325
Score = 119 bits (297), Expect = 3e-26
Identities = 60/77 (77%), Positives = 68/77 (87%)
Frame = -3
Query: 494 LQVSSEEAIETAKMLALKEGLLMGISSGAAAAAAITLGKRPENAGKLIVAIFPSLGERYL 315
+Q+SS+EAIETAK+LALKEGL +GISSGAAAAAA + KRPENAGKLIVA+FPS GERYL
Sbjct: 247 IQISSDEAIETAKLLALKEGLFVGISSGAAAAAAFQIAKRPENAGKLIVAVFPSFGERYL 306
Query: 314 SSPLSESIRHEAEQMTF 264
SS L ES+R EAE MTF
Sbjct: 307 SSVLFESVRREAESMTF 323
>sp|Q43317|CYSK_CITLA Cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) (CSase) (OAS-TL) gi|1071911|pir||S46438
cysteine synthase (EC 4.2.99.8) - watermelon
gi|540497|dbj|BAA05965.1| cysteine synthase [Citrullus
lanatus]
Length = 325
Score = 117 bits (293), Expect = 9e-26
Identities = 63/93 (67%), Positives = 74/93 (78%)
Frame = -3
Query: 542 FY*GIMD*KLTTRFYELQVSSEEAIETAKMLALKEGLLMGISSGAAAAAAITLGKRPENA 363
F G++D L +QVSSEE+IETAK+LALKEGLL+GISSGAAAAAAI + KRPENA
Sbjct: 233 FIPGVLDVNLLDEV--IQVSSEESIETAKLLALKEGLLVGISSGAAAAAAIRIAKRPENA 290
Query: 362 GKLIVAIFPSLGERYLSSPLSESIRHEAEQMTF 264
GKLIVA+FPS GERYLS+ L ES++ E E M F
Sbjct: 291 GKLIVAVFPSFGERYLSTVLFESVKRETENMVF 323
>emb|CAA06819.1| cysteine synthase, O-acetyl-L-serine (thiol)-lyase [Cicer
arietinum]
Length = 266
Score = 117 bits (293), Expect = 9e-26
Identities = 59/77 (76%), Positives = 68/77 (87%)
Frame = -3
Query: 494 LQVSSEEAIETAKMLALKEGLLMGISSGAAAAAAITLGKRPENAGKLIVAIFPSLGERYL 315
+Q+SS+EAIETAK+LALKEGL +GISSGAAAAAAI + KRPENAGKLIV +FPS GERYL
Sbjct: 188 IQISSDEAIETAKLLALKEGLFVGISSGAAAAAAIKIAKRPENAGKLIVVVFPSFGERYL 247
Query: 314 SSPLSESIRHEAEQMTF 264
SS L ES+R +AE MTF
Sbjct: 248 SSVLFESVRRQAETMTF 264
>sp|O81154|CYSK_SOLTU Cysteine synthase (O-acetylserine sulfhydrylase) (O-acetylserine
(Thiol)-lyase) (CSase A) (CS-A) (OAS-TL A)
gi|7436946|pir||T07001 cysteine synthase (EC 4.2.99.8),
cytosolic - potato gi|3290020|gb|AAC25635.1| cysteine
synthase; CS-A; O-acetylserine (thiol) lyase; cytosolic
isoform [Solanum tuberosum]
Length = 325
Score = 114 bits (286), Expect = 6e-25
Identities = 60/76 (78%), Positives = 67/76 (87%)
Frame = -3
Query: 494 LQVSSEEAIETAKMLALKEGLLMGISSGAAAAAAITLGKRPENAGKLIVAIFPSLGERYL 315
+QVSSEE+IE AK+LALKEGLL+GISSGAAAAAAI + KRPENAGKLIV IFPS GERYL
Sbjct: 247 VQVSSEESIEMAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIVVIFPSFGERYL 306
Query: 314 SSPLSESIRHEAEQMT 267
SS L E++R EAE MT
Sbjct: 307 SSVLFETVRREAENMT 322
>dbj|BAB20861.1| cytosolic cysteine synthase [Solanum tuberosum]
Length = 325
Score = 114 bits (286), Expect = 6e-25
Identities = 60/76 (78%), Positives = 67/76 (87%)
Frame = -3
Query: 494 LQVSSEEAIETAKMLALKEGLLMGISSGAAAAAAITLGKRPENAGKLIVAIFPSLGERYL 315
+QVSSEE+IE AK+LALKEGLL+GISSGAAAAAAI + KRPENAGKLIV IFPS GERYL
Sbjct: 247 VQVSSEESIEMAKLLALKEGLLVGISSGAAAAAAIKVAKRPENAGKLIVVIFPSFGERYL 306
Query: 314 SSPLSESIRHEAEQMT 267
SS L E++R EAE MT
Sbjct: 307 SSVLFETVRREAENMT 322
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 444,051,037
Number of Sequences: 1393205
Number of extensions: 8852365
Number of successful extensions: 22908
Number of sequences better than 10.0: 336
Number of HSP's better than 10.0 without gapping: 22098
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22807
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19234190289
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
