Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000363A_C01 KMC000363A_c01
(479 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T06783 ent-kaurene synthase A (EC 2.5.1.-) - garden pea gi|... 200 6e-51
gb|AAD04292.1| copalyl diphosphate synthase 1; CPS1 [Cucurbita m... 186 1e-46
dbj|BAB03594.1| copalyl diphosphate [Scoparia dulcis] 185 3e-46
ref|NP_192187.1| copalyl diphosphate synthase (CPS) (ent-kaurene... 182 2e-45
gb|AAB87091.1| copalyl pyrophosphate synthase [Stevia rebaudiana] 182 2e-45
>pir||T06783 ent-kaurene synthase A (EC 2.5.1.-) - garden pea
gi|2160544|gb|AAB58822.1| ent-kaurene synthase A [Pisum
sativum]
Length = 801
Score = 200 bits (509), Expect = 6e-51
Identities = 96/124 (77%), Positives = 107/124 (85%), Gaps = 3/124 (2%)
Frame = -3
Query: 477 FERNGEFFCFAGQSTQAVTGMFNLYRASQVVFPGEKILDNANQFSAEFLREKRAANELID 298
FERNGEFFCFAGQ TQAVTGM+NL+RASQV+FPGEKIL++A FSA+ L+EKR ANELID
Sbjct: 399 FERNGEFFCFAGQCTQAVTGMYNLFRASQVLFPGEKILEHAKHFSAKVLKEKREANELID 458
Query: 297 KWVIMKNLPEEVAYALDVPWYANLPRVETRFYIDQYGGESDVWIGKTLYRFLL---STYL 127
KW+IMKNLPEEV YALD+PWYANL R+ETRFYIDQYG ESDVWIGKTLYR + YL
Sbjct: 459 KWIIMKNLPEEVGYALDMPWYANLDRIETRFYIDQYGAESDVWIGKTLYRMAYVNNNNYL 518
Query: 126 LLPK 115
L K
Sbjct: 519 ELAK 522
>gb|AAD04292.1| copalyl diphosphate synthase 1; CPS1 [Cucurbita maxima]
Length = 823
Score = 186 bits (471), Expect = 1e-46
Identities = 90/125 (72%), Positives = 108/125 (86%), Gaps = 4/125 (3%)
Frame = -3
Query: 477 FERNGEFFCFAGQSTQAVTGMFNLYRAS-QVVFPGEKILDNANQFSAEFLREKRAANELI 301
FE++GEF C AGQSTQAVTGMFNLYRAS QV+FPGEKIL++A QFS +FLREK+AA+EL+
Sbjct: 408 FEKDGEFVCIAGQSTQAVTGMFNLYRASDQVMFPGEKILEDAKQFSYKFLREKQAADELL 467
Query: 300 DKWVIMKNLPEEVAYALDVPWYANLPRVETRFYIDQYGGESDVWIGKTLYRFLL---STY 130
DKW+I K+LP EV YALDVPW+A+LPRVETR++I+QYGGE+D+WIGKTLYR TY
Sbjct: 468 DKWIITKDLPGEVGYALDVPWFASLPRVETRYFIEQYGGENDIWIGKTLYRMFKVNNDTY 527
Query: 129 LLLPK 115
L L K
Sbjct: 528 LELAK 532
>dbj|BAB03594.1| copalyl diphosphate [Scoparia dulcis]
Length = 827
Score = 185 bits (469), Expect = 3e-46
Identities = 88/124 (70%), Positives = 102/124 (81%), Gaps = 3/124 (2%)
Frame = -3
Query: 477 FERNGEFFCFAGQSTQAVTGMFNLYRASQVVFPGEKILDNANQFSAEFLREKRAANELID 298
FE GEFFCF GQSTQAVTGM+NL+RASQV+FPGE IL NA F ++FL+EKRA NEL+D
Sbjct: 413 FENGGEFFCFVGQSTQAVTGMYNLFRASQVMFPGEDILSNAKSFLSKFLQEKRANNELLD 472
Query: 297 KWVIMKNLPEEVAYALDVPWYANLPRVETRFYIDQYGGESDVWIGKTLYRFLL---STYL 127
KW+I K+LP EV YALDVPWYA+LPRVETR Y++QYGG+ DVWIGKTLYR +TYL
Sbjct: 473 KWIITKDLPGEVGYALDVPWYASLPRVETRLYLEQYGGQDDVWIGKTLYRMPYVNNNTYL 532
Query: 126 LLPK 115
L K
Sbjct: 533 ELAK 536
>ref|NP_192187.1| copalyl diphosphate synthase (CPS) (ent-kaurene synthetase A);
protein id: At4g02780.1, supported by cDNA: gi_571329
[Arabidopsis thaliana] gi|25407151|pir||D85035
ent-kaurene synthetase A-like protein [imported] -
Arabidopsis thaliana gi|571330|gb|AAA53632.1|
ent-kaurene synthetase A gi|4263508|gb|AAD15334.1|
ent-kaurene synthetase A [Arabidopsis thaliana]
gi|7269763|emb|CAB77763.1| ent-kaurene synthetase A-like
protein [Arabidopsis thaliana]
Length = 802
Score = 182 bits (462), Expect = 2e-45
Identities = 87/125 (69%), Positives = 101/125 (80%), Gaps = 3/125 (2%)
Frame = -3
Query: 477 FERNGEFFCFAGQSTQAVTGMFNLYRASQVVFPGEKILDNANQFSAEFLREKRAANELID 298
FE+ GEFFCF GQS QAVTGMFNLYRASQ+ FP E+IL NA +FS +L EKR ELID
Sbjct: 403 FEKEGEFFCFVGQSNQAVTGMFNLYRASQLAFPREEILKNAKEFSYNYLLEKREREELID 462
Query: 297 KWVIMKNLPEEVAYALDVPWYANLPRVETRFYIDQYGGESDVWIGKTLYRFLL---STYL 127
KW+IMK+LP E+ +AL++PWYA+LPRVETRFYIDQYGGE+DVWIGKTLYR + YL
Sbjct: 463 KWIIMKDLPGEIGFALEIPWYASLPRVETRFYIDQYGGENDVWIGKTLYRMPYVNNNGYL 522
Query: 126 LLPKQ 112
L KQ
Sbjct: 523 ELAKQ 527
>gb|AAB87091.1| copalyl pyrophosphate synthase [Stevia rebaudiana]
Length = 787
Score = 182 bits (461), Expect = 2e-45
Identities = 82/124 (66%), Positives = 107/124 (86%), Gaps = 3/124 (2%)
Frame = -3
Query: 477 FERNGEFFCFAGQSTQAVTGMFNLYRASQVVFPGEKILDNANQFSAEFLREKRAANELID 298
FE++G+F CFAGQSTQAVTGMFN+YRASQ++FPGE+IL++A +FS +L+EK++ NEL+D
Sbjct: 399 FEKDGKFVCFAGQSTQAVTGMFNVYRASQMLFPGERILEDAKKFSYNYLKEKQSTNELLD 458
Query: 297 KWVIMKNLPEEVAYALDVPWYANLPRVETRFYIDQYGGESDVWIGKTLYRF---LLSTYL 127
KW+I K+LP EV YALD+PWYA+LPR+ETR+Y++QYGGE DVWIGKTLYR +TYL
Sbjct: 459 KWIIAKDLPGEVGYALDIPWYASLPRLETRYYLEQYGGEDDVWIGKTLYRMGYVSNNTYL 518
Query: 126 LLPK 115
+ K
Sbjct: 519 EMAK 522
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 398,067,227
Number of Sequences: 1393205
Number of extensions: 8142365
Number of successful extensions: 18306
Number of sequences better than 10.0: 142
Number of HSP's better than 10.0 without gapping: 17984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18254
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13397825772
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
