Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000362A_C01 KMC000362A_c01
(626 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_179583.1| hypothetical protein; protein id: At2g19930.1 [... 166 2e-40
ref|NP_179581.1| hypothetical protein; protein id: At2g19910.1 [... 164 7e-40
dbj|BAB56097.1| P0419B01.13 [Oryza sativa (japonica cultivar-gro... 162 3e-39
dbj|BAB56098.1| P0419B01.14 [Oryza sativa (japonica cultivar-gro... 151 8e-36
ref|NP_179582.1| hypothetical protein; protein id: At2g19920.1 [... 138 7e-32
>ref|NP_179583.1| hypothetical protein; protein id: At2g19930.1 [Arabidopsis
thaliana] gi|25411946|pir||H84582 hypothetical protein
At2g19930 [imported] - Arabidopsis thaliana
gi|3687225|gb|AAC62123.1| hypothetical protein
[Arabidopsis thaliana]
Length = 929
Score = 166 bits (421), Expect = 2e-40
Identities = 74/113 (65%), Positives = 97/113 (85%)
Frame = -2
Query: 610 EKKRLRGGRLYLPDCFYLMGTVDPTGRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIH 431
EK L+ G+L + + +YLMGTVDPTG LK +EVC+I E+GQI+G+VLVYRNPGLHFGDIH
Sbjct: 504 EKNDLKAGKLPVTESYYLMGTVDPTGALKEDEVCVILESGQISGEVLVYRNPGLHFGDIH 563
Query: 430 IMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDFDGDLYWVSKHPQV 272
I+ A YV+ LE YVG+SK+A+FFP GPRS+ DEIAGGDFDGD+Y++S++P++
Sbjct: 564 ILKATYVKALEEYVGNSKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPEL 616
>ref|NP_179581.1| hypothetical protein; protein id: At2g19910.1 [Arabidopsis
thaliana] gi|25411942|pir||F84582 hypothetical protein
At2g19910 [imported] - Arabidopsis thaliana
gi|3687227|gb|AAC62125.1| hypothetical protein
[Arabidopsis thaliana]
Length = 966
Score = 164 bits (416), Expect = 7e-40
Identities = 70/113 (61%), Positives = 95/113 (83%)
Frame = -2
Query: 610 EKKRLRGGRLYLPDCFYLMGTVDPTGRLKANEVCIIHENGQITGDVLVYRNPGLHFGDIH 431
E+ L+ GR + + +Y+MGTVDPTG LK NE+C+I +GQI+GDVLVYRNPGLHFGDIH
Sbjct: 569 ERNALKAGRFPIDESYYIMGTVDPTGELKENEICVILHSGQISGDVLVYRNPGLHFGDIH 628
Query: 430 IMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDFDGDLYWVSKHPQV 272
++ A YV+ LE YVG++K+A+FFP GPRS+ DEIAGGDFDGD+Y++S++P++
Sbjct: 629 VLKATYVKALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKL 681
>dbj|BAB56097.1| P0419B01.13 [Oryza sativa (japonica cultivar-group)]
gi|20160456|dbj|BAB89409.1| B1046G12.7 [Oryza sativa
(japonica cultivar-group)]
Length = 1148
Score = 162 bits (410), Expect = 3e-39
Identities = 70/118 (59%), Positives = 97/118 (81%), Gaps = 1/118 (0%)
Frame = -2
Query: 622 LAIEEKKRLRGGRLYLPDCFYLMGTVDPTGRLKANEVCIIHENGQITGDVLVYRNPGLHF 443
+A +E+K ++ G++ + +C+YLM T DPTG L+ NEVC+I ENGQ +GDVLVY++PGLHF
Sbjct: 738 MAQQERKGIKQGKIPIDECYYLMDTTDPTGTLRPNEVCVILENGQFSGDVLVYKHPGLHF 797
Query: 442 GDIHIMHARYVEELE-SYVGHSKYAIFFPCVGPRSIADEIAGGDFDGDLYWVSKHPQV 272
GDIH++ A Y+ +LE YVG++KYAI FP GPRS+ADE+A DFDGD+YWVSK+P++
Sbjct: 798 GDIHVLKATYIRDLEKEYVGYAKYAILFPISGPRSLADEMANSDFDGDIYWVSKNPKL 855
>dbj|BAB56098.1| P0419B01.14 [Oryza sativa (japonica cultivar-group)]
gi|20160457|dbj|BAB89410.1| B1046G12.8 [Oryza sativa
(japonica cultivar-group)]
Length = 1222
Score = 151 bits (381), Expect = 8e-36
Identities = 65/117 (55%), Positives = 92/117 (78%)
Frame = -2
Query: 622 LAIEEKKRLRGGRLYLPDCFYLMGTVDPTGRLKANEVCIIHENGQITGDVLVYRNPGLHF 443
L++ E+K ++ G++ + DC+YLMGT DPTG+L NEVC+I + GQ++GDVLVY+ PGLH
Sbjct: 814 LSLLERKGIKNGKIPIDDCYYLMGTADPTGKLGPNEVCVILDYGQVSGDVLVYKYPGLHP 873
Query: 442 GDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDFDGDLYWVSKHPQV 272
GDIH++ A Y ++E VG+SK+AI FP G RS+ADE+A DFDGD+YWVS +P++
Sbjct: 874 GDIHVLKATYSSDIEKVVGNSKHAILFPTTGQRSLADEMANSDFDGDIYWVSLNPKL 930
>ref|NP_179582.1| hypothetical protein; protein id: At2g19920.1 [Arabidopsis
thaliana] gi|25411944|pir||G84582 hypothetical protein
At2g19920 [imported] - Arabidopsis thaliana
gi|3687226|gb|AAC62124.1| hypothetical protein
[Arabidopsis thaliana]
Length = 905
Score = 138 bits (347), Expect = 7e-32
Identities = 66/118 (55%), Positives = 85/118 (71%)
Frame = -2
Query: 625 KLAIEEKKRLRGGRLYLPDCFYLMGTVDPTGRLKANEVCIIHENGQITGDVLVYRNPGLH 446
KL EK L+ G+L + + +YLMGTVDPTG LK +EVC+I NPGLH
Sbjct: 588 KLLKLEKDDLKAGKLPIDESYYLMGTVDPTGELKEDEVCVI-------------LNPGLH 634
Query: 445 FGDIHIMHARYVEELESYVGHSKYAIFFPCVGPRSIADEIAGGDFDGDLYWVSKHPQV 272
FGDIHI+ A YV+ LE YVG+SKY +FFP GPRS+ DEIAGGDFDGD+Y++S++P++
Sbjct: 635 FGDIHILKATYVKSLEQYVGNSKYGVFFPQKGPRSLGDEIAGGDFDGDMYFISRNPKL 692
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 576,026,418
Number of Sequences: 1393205
Number of extensions: 13575984
Number of successful extensions: 42648
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 38707
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42456
length of database: 448,689,247
effective HSP length: 118
effective length of database: 284,291,057
effective search space used: 25586195130
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
