Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000357A_C01 KMC000357A_c01
(557 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197342.1| putative protein; protein id: At5g18410.1 [Arab... 175 3e-43
gb|AAL69375.1|AF462212_1 unknown [Narcissus pseudonarcissus] 115 4e-25
gb|AAH28941.1| Unknown (protein for IMAGE:5365148) [Mus musculus] 40 0.015
pir||T46248 hypothetical protein DKFZp761I12121.1 - human gi|680... 40 0.015
ref|NP_055191.1| p53 inducible protein [Homo sapiens] gi|1507994... 40 0.015
>ref|NP_197342.1| putative protein; protein id: At5g18410.1 [Arabidopsis thaliana]
Length = 1235
Score = 175 bits (444), Expect = 3e-43
Identities = 84/107 (78%), Positives = 95/107 (88%)
Frame = -2
Query: 556 TIIYLLGQQLHFELFDFSYQILNIAEVEAASVVQTHKNTHLPVQGWETLLEAMKKARRLN 377
TIIYLLGQQLHFELFDFSYQ+LN++EVE S TH+N + QGWE LLE MKKARRLN
Sbjct: 1127 TIIYLLGQQLHFELFDFSYQVLNVSEVETVSASHTHRNPQIH-QGWEGLLEGMKKARRLN 1185
Query: 376 NHVFSMLRARCPLEEKTACAIKQSGAPIHRIKFDNTVSAFETLPQKG 236
NHVFSML+ARCPLE+KTACAIKQSGAP+ R++F+NTVSAFETLPQKG
Sbjct: 1186 NHVFSMLKARCPLEDKTACAIKQSGAPLPRVRFENTVSAFETLPQKG 1232
>gb|AAL69375.1|AF462212_1 unknown [Narcissus pseudonarcissus]
Length = 80
Score = 115 bits (288), Expect = 4e-25
Identities = 56/81 (69%), Positives = 70/81 (86%)
Frame = -2
Query: 478 VEAASVVQTHKNTHLPVQGWETLLEAMKKARRLNNHVFSMLRARCPLEEKTACAIKQSGA 299
++++S +T + +L G+E LLEAM+KARRLNNHVFSML+ARCPLE+K ACAIKQSGA
Sbjct: 1 LQSSSSDRTKNSNYL--LGYENLLEAMRKARRLNNHVFSMLKARCPLEDKVACAIKQSGA 58
Query: 298 PIHRIKFDNTVSAFETLPQKG 236
P+HR++F NTVSAFETLPQKG
Sbjct: 59 PLHRVRFVNTVSAFETLPQKG 79
>gb|AAH28941.1| Unknown (protein for IMAGE:5365148) [Mus musculus]
Length = 182
Score = 40.4 bits (93), Expect = 0.015
Identities = 24/67 (35%), Positives = 38/67 (55%)
Frame = -2
Query: 556 TIIYLLGQQLHFELFDFSYQILNIAEVEAASVVQTHKNTHLPVQGWETLLEAMKKARRLN 377
+II LLGQQ F+LFDF Y +L + + + KN L + + + ++K + LN
Sbjct: 91 SIIVLLGQQRRFDLFDFCYHLLKVQRQDGKD--EIIKNVPL-----KKMADRIRKYQILN 143
Query: 376 NHVFSML 356
N VF++L
Sbjct: 144 NEVFAIL 150
>pir||T46248 hypothetical protein DKFZp761I12121.1 - human
gi|6807649|emb|CAB66484.1| hypothetical protein [Homo
sapiens]
Length = 1253
Score = 40.4 bits (93), Expect = 0.015
Identities = 24/67 (35%), Positives = 38/67 (55%)
Frame = -2
Query: 556 TIIYLLGQQLHFELFDFSYQILNIAEVEAASVVQTHKNTHLPVQGWETLLEAMKKARRLN 377
+II LLGQQ F+LFDF Y +L + + + KN L + + + ++K + LN
Sbjct: 1162 SIIVLLGQQRRFDLFDFCYHLLKVQRQDGKD--EIIKNVPL-----KKMADRIRKYQILN 1214
Query: 376 NHVFSML 356
N VF++L
Sbjct: 1215 NEVFAIL 1221
>ref|NP_055191.1| p53 inducible protein [Homo sapiens]
gi|15079949|gb|AAH11762.1|AAH11762 Similar to p53
inducible protein [Homo sapiens]
Length = 1253
Score = 40.4 bits (93), Expect = 0.015
Identities = 24/67 (35%), Positives = 38/67 (55%)
Frame = -2
Query: 556 TIIYLLGQQLHFELFDFSYQILNIAEVEAASVVQTHKNTHLPVQGWETLLEAMKKARRLN 377
+II LLGQQ F+LFDF Y +L + + + KN L + + + ++K + LN
Sbjct: 1162 SIIVLLGQQRRFDLFDFCYHLLKVQRQDGKD--EIIKNVPL-----KKMADRIRKYQILN 1214
Query: 376 NHVFSML 356
N VF++L
Sbjct: 1215 NEVFAIL 1221
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 453,450,905
Number of Sequences: 1393205
Number of extensions: 9354079
Number of successful extensions: 21893
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 21283
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21889
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19808345223
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
