Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000352A_C01 KMC000352A_c01
(499 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_198599.1| 5-oxoprolinase -like protein; protein id: At5g3... 123 1e-27
dbj|BAC05619.1| similar to 5-oxoprolinase [Oryza sativa (japonic... 121 5e-27
ref|NP_012707.1| Hypothetical ORF; Ykl215cp [Saccharomyces cerev... 78 2e-15
emb|CAA42015.1| ORF1 [Saccharomyces cerevisiae] gi|171395|gb|AAA... 78 2e-15
ref|NP_592810.1| putative oxoprolinase [Schizosaccharomyces pomb... 82 4e-15
>ref|NP_198599.1| 5-oxoprolinase -like protein; protein id: At5g37830.1, supported by
cDNA: gi_20856447 [Arabidopsis thaliana]
gi|10177173|dbj|BAB10362.1| 5-oxoprolinase [Arabidopsis
thaliana] gi|20856448|gb|AAM26666.1| AT5g37830/K22F20_70
[Arabidopsis thaliana] gi|28416451|gb|AAO42756.1|
At5g37830/K22F20_70 [Arabidopsis thaliana]
Length = 1266
Score = 123 bits (309), Expect = 1e-27
Identities = 57/76 (75%), Positives = 67/76 (88%)
Frame = -2
Query: 498 FGLRETRGGDGVHRGGDGLLREIEFRRPVTVSLLSERRVPAPRGLKGGKDGARGGNYLIK 319
FGLRE GG+G+H+GGDGL+REIEFR+PV VS+LSERRV +PRGL GG++G RG NYLI
Sbjct: 1171 FGLRENSGGNGLHKGGDGLVREIEFRKPVVVSILSERRVHSPRGLNGGQNGLRGANYLIT 1230
Query: 318 KDKRKIYLGGKNTVQV 271
KDKR+IYLGGKNTV V
Sbjct: 1231 KDKRRIYLGGKNTVHV 1246
Score = 42.0 bits (97), Expect = 0.004
Identities = 24/53 (45%), Positives = 27/53 (50%)
Frame = -3
Query: 374 PEG*REGKTALVAVTTL*RKINGRFILAGRILCRFFPGEILQILTPGGGGWGS 216
P G G+ L L K R L G+ GEILQILTPGGGG+GS
Sbjct: 1212 PRGLNGGQNGLRGANYLITKDKRRIYLGGKNTVHVEAGEILQILTPGGGGFGS 1264
>dbj|BAC05619.1| similar to 5-oxoprolinase [Oryza sativa (japonica cultivar-group)]
Length = 1257
Score = 121 bits (303), Expect = 5e-27
Identities = 56/76 (73%), Positives = 65/76 (84%)
Frame = -2
Query: 498 FGLRETRGGDGVHRGGDGLLREIEFRRPVTVSLLSERRVPAPRGLKGGKDGARGGNYLIK 319
F +RE GG G HRGGDGL+REIEF +PV VS+LSERRV APRGLKGG++GARG NYL+K
Sbjct: 1163 FSIRENSGGSGFHRGGDGLVREIEFCQPVVVSILSERRVHAPRGLKGGRNGARGANYLVK 1222
Query: 318 KDKRKIYLGGKNTVQV 271
KD R++YLGGKNTV V
Sbjct: 1223 KDGRRVYLGGKNTVMV 1238
Score = 44.3 bits (103), Expect = 8e-04
Identities = 24/54 (44%), Positives = 29/54 (53%)
Frame = -3
Query: 374 PEG*REGKTALVAVTTL*RKINGRFILAGRILCRFFPGEILQILTPGGGGWGSP 213
P G + G+ L +K R L G+ GEILQILTPGGGG+GSP
Sbjct: 1204 PRGLKGGRNGARGANYLVKKDGRRVYLGGKNTVMVNAGEILQILTPGGGGFGSP 1257
>ref|NP_012707.1| Hypothetical ORF; Ykl215cp [Saccharomyces cerevisiae]
gi|549754|sp|P28273|YKV5_YEAST Hypothetical 140.4 kDa
protein in URA1-DOA1 intergenic region
gi|539224|pir||S38058 hypothetical protein YKL215c -
yeast (Saccharomyces cerevisiae)
gi|473135|emb|CAA53558.1| ORF4, F1286 [Saccharomyces
cerevisiae] gi|486385|emb|CAA82060.1| ORF YKL215c
[Saccharomyces cerevisiae]
Length = 1286
Score = 77.8 bits (190), Expect(2) = 2e-15
Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = -2
Query: 498 FGLRETRGGDGVHRGGDGLLREIEFRRPVTVSLLSERRVPAPRGLKGGKDGARGGNYLIK 319
F +R GG G + GG+G++R+++FR+ VT S+LSERRV P G+KGG+DG+RG N ++
Sbjct: 1189 FSIRRGSGGKGKYTGGNGVVRDVQFRKAVTASILSERRVIGPHGIKGGQDGSRGENLWVR 1248
Query: 318 KDK-RKIYLGGKNTV 277
I +GGKNT+
Sbjct: 1249 HSTGALINVGGKNTI 1263
Score = 25.4 bits (54), Expect(2) = 2e-15
Identities = 10/16 (62%), Positives = 12/16 (74%)
Frame = -3
Query: 266 PGEILQILTPGGGGWG 219
PG+ I TPGGGG+G
Sbjct: 1267 PGDRFIIKTPGGGGFG 1282
>emb|CAA42015.1| ORF1 [Saccharomyces cerevisiae] gi|171395|gb|AAA34567.1| ORF 1
Length = 284
Score = 77.8 bits (190), Expect(2) = 2e-15
Identities = 36/75 (48%), Positives = 53/75 (70%), Gaps = 1/75 (1%)
Frame = -2
Query: 498 FGLRETRGGDGVHRGGDGLLREIEFRRPVTVSLLSERRVPAPRGLKGGKDGARGGNYLIK 319
F +R GG G + GG+G++R+++FR+ VT S+LSERRV P G+KGG+DG+RG N ++
Sbjct: 187 FSIRRGSGGKGKYTGGNGVVRDVQFRKAVTASILSERRVIGPHGIKGGQDGSRGENLWVR 246
Query: 318 KDK-RKIYLGGKNTV 277
I +GGKNT+
Sbjct: 247 HSTGALINVGGKNTI 261
Score = 25.4 bits (54), Expect(2) = 2e-15
Identities = 10/16 (62%), Positives = 12/16 (74%)
Frame = -3
Query: 266 PGEILQILTPGGGGWG 219
PG+ I TPGGGG+G
Sbjct: 265 PGDRFIIKTPGGGGFG 280
>ref|NP_592810.1| putative oxoprolinase [Schizosaccharomyces pombe]
gi|1351711|sp|Q10094|YAOF_SCHPO Hypothetical protein
C11D3.15 in chromosome I gi|7492788|pir||T37524 probable
oxoprolinase - fission yeast (Schizosaccharomyces pombe)
gi|1107904|emb|CAA92316.1| putative oxoprolinase
[Schizosaccharomyces pombe]
Length = 1317
Score = 81.6 bits (200), Expect = 4e-15
Identities = 43/81 (53%), Positives = 55/81 (67%), Gaps = 8/81 (9%)
Frame = -2
Query: 498 FGLRETRGGDGVHRGGDGLLREIEFRRPVTVSLLSERRVPAPRGLKGGKDGARGGNYLIK 319
F +RE GG G ++GGDG++R+IEFR PVT+S+LSERR P G+KGGKD G N I+
Sbjct: 1183 FIIRENSGGAGKYKGGDGVIRDIEFRIPVTLSILSERRAYHPYGMKGGKDAECGKNIWIR 1242
Query: 318 KD--------KRKIYLGGKNT 280
KD R+I +GGKNT
Sbjct: 1243 KDILPSGEQRVRQINVGGKNT 1263
Score = 32.3 bits (72), Expect = 3.0
Identities = 15/36 (41%), Positives = 22/36 (60%)
Frame = -3
Query: 320 RKINGRFILAGRILCRFFPGEILQILTPGGGGWGSP 213
R+IN + G+ C G+ + I+TPGGGG+G P
Sbjct: 1254 RQIN----VGGKNTCHMQAGDHIVIMTPGGGGYGPP 1285
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 471,315,934
Number of Sequences: 1393205
Number of extensions: 11147801
Number of successful extensions: 33356
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 30301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33210
length of database: 448,689,247
effective HSP length: 114
effective length of database: 289,863,877
effective search space used: 14783057727
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
