Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000318A_C01 KMC000318A_c01
(596 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T03792 kinesin-related protein tck1 - common tobacco gi|149... 176 2e-43
pir||T07397 kinesin heavy chain-like protein (clone PKCBP) - pot... 174 6e-43
gb|AAO72660.1| kinesin-like calmodulin-binding protein-like prot... 162 4e-39
gb|AAG13460.1|AF223412_1 kinesin-like calmodulin binding protein... 161 5e-39
ref|NP_569022.1| kinesin-like calmodulin-binding protein; protei... 157 1e-37
>pir||T03792 kinesin-related protein tck1 - common tobacco
gi|1491931|gb|AAC49393.1| kinesin-like protein
Length = 1265
Score = 176 bits (446), Expect = 2e-43
Identities = 85/105 (80%), Positives = 97/105 (91%)
Frame = -2
Query: 595 IPYRNHKLTMLMSDSLGGNAKTLMFVNVSPVESSLDETHNSLMYASRVRSIINDPSKNVA 416
IPYRNHKLTMLMSDSLGGNAKTLMFVN+SP ES+LDETHNSL YASRVRSI+NDPSKNV+
Sbjct: 1160 IPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVS 1219
Query: 415 SKEIARLKKLVSYWKQQAGRGLENEDLEEIQDERSSEERTESRGS 281
SKE+ARLKKLV YWK+QAGR ++EDLEEIQDER ++E+T+ R S
Sbjct: 1220 SKEVARLKKLVGYWKEQAGRKGDDEDLEEIQDERPTKEKTDGRHS 1264
>pir||T07397 kinesin heavy chain-like protein (clone PKCBP) - potato
gi|1369852|gb|AAB37756.1| kinesin heavy chain-like
protein
Length = 1265
Score = 174 bits (442), Expect = 6e-43
Identities = 84/105 (80%), Positives = 98/105 (93%)
Frame = -2
Query: 595 IPYRNHKLTMLMSDSLGGNAKTLMFVNVSPVESSLDETHNSLMYASRVRSIINDPSKNVA 416
IPYRNHKLTMLMSDSLGGNAKTLMFVN+SP ES+LDETHNSL YASRVRSI+NDPSKNV+
Sbjct: 1160 IPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDETHNSLTYASRVRSIVNDPSKNVS 1219
Query: 415 SKEIARLKKLVSYWKQQAGRGLENEDLEEIQDERSSEERTESRGS 281
SKE+ARLKKLVSYWK+QAGR ++E+LEEIQDER ++++T+ R S
Sbjct: 1220 SKEVARLKKLVSYWKEQAGRKGDDEELEEIQDERPTKDKTDGRYS 1264
>gb|AAO72660.1| kinesin-like calmodulin-binding protein-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 1226
Score = 162 bits (409), Expect = 4e-39
Identities = 78/106 (73%), Positives = 96/106 (89%)
Frame = -2
Query: 595 IPYRNHKLTMLMSDSLGGNAKTLMFVNVSPVESSLDETHNSLMYASRVRSIINDPSKNVA 416
IPYRNHKLTMLMSDSLGGNAKTLMFVNVSP ES+L+ET+NSLMYASRVR I+ND SK+VA
Sbjct: 1121 IPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLEETYNSLMYASRVRCIVNDTSKHVA 1180
Query: 415 SKEIARLKKLVSYWKQQAGRGLENEDLEEIQDERSSEERTESRGSS 278
KEI RLKKL++YWK+QAG+ E++DLEEIQ+ER+ +E+ ++R +S
Sbjct: 1181 PKEIMRLKKLIAYWKEQAGKRSEDDDLEEIQEERTPKEKADNRLTS 1226
>gb|AAG13460.1|AF223412_1 kinesin-like calmodulin binding protein [Zea mays]
Length = 1200
Score = 161 bits (408), Expect = 5e-39
Identities = 78/106 (73%), Positives = 96/106 (89%)
Frame = -2
Query: 595 IPYRNHKLTMLMSDSLGGNAKTLMFVNVSPVESSLDETHNSLMYASRVRSIINDPSKNVA 416
IPYRNHKLTMLMSDSLGGNAKTLMFVNVSP ES+L+ET+NSLMYASRVR I+ND SK+VA
Sbjct: 1095 IPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLEETYNSLMYASRVRCIVNDTSKHVA 1154
Query: 415 SKEIARLKKLVSYWKQQAGRGLENEDLEEIQDERSSEERTESRGSS 278
KEI RLKKL++YWK+QAG+ + ++LEEIQ+ER S+ER+++R +S
Sbjct: 1155 PKEIMRLKKLIAYWKEQAGKRSDEDELEEIQEERISKERSDNRMTS 1200
>ref|NP_569022.1| kinesin-like calmodulin-binding protein; protein id: At5g65930.1,
supported by cDNA: gi_1237101 [Arabidopsis thaliana]
gi|2224925|gb|AAB61712.1| kinesin-like protein
[Arabidopsis thaliana]
Length = 1259
Score = 157 bits (396), Expect = 1e-37
Identities = 73/102 (71%), Positives = 93/102 (90%)
Frame = -2
Query: 595 IPYRNHKLTMLMSDSLGGNAKTLMFVNVSPVESSLDETHNSLMYASRVRSIINDPSKNVA 416
IPYRNHKLTMLMSDSLGGNAKTLMFVNVSP ES+LDET+NSL+YASRVR+I+NDPSK+++
Sbjct: 1158 IPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETYNSLLYASRVRTIVNDPSKHIS 1217
Query: 415 SKEIARLKKLVSYWKQQAGRGLENEDLEEIQDERSSEERTES 290
SKE+ RLKKLV+YWK+QAG+ E EDL +I+++R+ ++ +S
Sbjct: 1218 SKEMVRLKKLVAYWKEQAGKKGEEEDLVDIEEDRTRKDEADS 1259
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 449,379,669
Number of Sequences: 1393205
Number of extensions: 8572968
Number of successful extensions: 23491
Number of sequences better than 10.0: 690
Number of HSP's better than 10.0 without gapping: 22803
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23448
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23140425222
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
