Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000310A_C02 KMC000310A_c02
(607 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_195385.1| sugar transporter like protein; protein id: At4... 128 7e-29
gb|AAL58131.1|AC093093_4 putative mannitol transporter protein [... 125 6e-28
ref|NP_179438.1| putative sugar transporter; protein id: At2g184... 125 6e-28
gb|AAK13147.1|AC083945_22 Putative sugar transporter [Oryza sativa] 125 6e-28
gb|AAO39267.1|AF482011_1 sorbitol transporter [Prunus cerasus] 124 1e-27
>ref|NP_195385.1| sugar transporter like protein; protein id: At4g36670.1
[Arabidopsis thaliana] gi|25308953|pir||A85433 sugar
transporter like protein [imported] - Arabidopsis
thaliana gi|2464913|emb|CAB16808.1| sugar transporter
like protein [Arabidopsis thaliana]
gi|7270615|emb|CAB80333.1| sugar transporter like
protein [Arabidopsis thaliana]
Length = 493
Score = 128 bits (321), Expect = 7e-29
Identities = 59/86 (68%), Positives = 73/86 (84%)
Frame = -2
Query: 606 WVYSSEIFPLRLRAQGNSIGVAVNRGMNAAISMSFISIYKAITIGGAFFLFAGMSVVAWV 427
WVYSSE+FPL+LRAQG S+GVAVNR MNA +SMSF+S+ AIT GGAFF+FAG++ VAW
Sbjct: 399 WVYSSEVFPLKLRAQGASLGVAVNRVMNATVSMSFLSLTSAITTGGAFFMFAGVAAVAWN 458
Query: 426 FFYFCLPETKGKALEEMEMVFSKKSD 349
FF+F LPETKGK+LEE+E +F + D
Sbjct: 459 FFFFLLPETKGKSLEEIEALFQRDGD 484
>gb|AAL58131.1|AC093093_4 putative mannitol transporter protein [Oryza sativa (japonica
cultivar-group)]
Length = 506
Score = 125 bits (313), Expect = 6e-28
Identities = 58/83 (69%), Positives = 71/83 (84%)
Frame = -2
Query: 606 WVYSSEIFPLRLRAQGNSIGVAVNRGMNAAISMSFISIYKAITIGGAFFLFAGMSVVAWV 427
W YSSE++PLRLRAQG S+GVA+NR MNA +SM+F+S+YKAITIGGAFFLFAG++V A
Sbjct: 395 WAYSSEVYPLRLRAQGASVGVAINRVMNAGVSMTFVSLYKAITIGGAFFLFAGLAVAAAT 454
Query: 426 FFYFCLPETKGKALEEMEMVFSK 358
FFY PET+GK LEE+E VFS+
Sbjct: 455 FFYLLCPETQGKPLEEIEEVFSQ 477
>ref|NP_179438.1| putative sugar transporter; protein id: At2g18480.1 [Arabidopsis
thaliana] gi|25308961|pir||G84564 probable sugar
transporter [imported] - Arabidopsis thaliana
gi|4218010|gb|AAD12218.1| putative sugar transporter
[Arabidopsis thaliana] gi|20197812|gb|AAM15258.1|
putative sugar transporter [Arabidopsis thaliana]
Length = 508
Score = 125 bits (313), Expect = 6e-28
Identities = 61/81 (75%), Positives = 69/81 (84%)
Frame = -2
Query: 606 WVYSSEIFPLRLRAQGNSIGVAVNRGMNAAISMSFISIYKAITIGGAFFLFAGMSVVAWV 427
WVYSSEIFPLRLRAQG SIGVAVNR MNA +SMSF+S+ KAIT GG FF+FAG++V AW
Sbjct: 403 WVYSSEIFPLRLRAQGASIGVAVNRIMNATVSMSFLSMTKAITTGGVFFVFAGIAVAAWW 462
Query: 426 FFYFCLPETKGKALEEMEMVF 364
FF+F LPETKG LEEME +F
Sbjct: 463 FFFFMLPETKGLPLEEMEKLF 483
>gb|AAK13147.1|AC083945_22 Putative sugar transporter [Oryza sativa]
Length = 574
Score = 125 bits (313), Expect = 6e-28
Identities = 58/83 (69%), Positives = 71/83 (84%)
Frame = -2
Query: 606 WVYSSEIFPLRLRAQGNSIGVAVNRGMNAAISMSFISIYKAITIGGAFFLFAGMSVVAWV 427
W YSSE++PLRLRAQG S+GVA+NR MNA +SM+F+S+YKAITIGGAFFLFAG++V A
Sbjct: 463 WAYSSEVYPLRLRAQGASVGVAINRVMNAGVSMTFVSLYKAITIGGAFFLFAGLAVAAAT 522
Query: 426 FFYFCLPETKGKALEEMEMVFSK 358
FFY PET+GK LEE+E VFS+
Sbjct: 523 FFYLLCPETQGKPLEEIEEVFSQ 545
>gb|AAO39267.1|AF482011_1 sorbitol transporter [Prunus cerasus]
Length = 509
Score = 124 bits (310), Expect = 1e-27
Identities = 57/83 (68%), Positives = 71/83 (84%)
Frame = -2
Query: 606 WVYSSEIFPLRLRAQGNSIGVAVNRGMNAAISMSFISIYKAITIGGAFFLFAGMSVVAWV 427
WVYSSEIFPL+LRAQG S+G AVNR M+ +SMSFIS+YKAIT+GG FFL+AG++ V WV
Sbjct: 408 WVYSSEIFPLKLRAQGCSMGTAVNRIMSGVLSMSFISLYKAITMGGTFFLYAGIATVGWV 467
Query: 426 FFYFCLPETKGKALEEMEMVFSK 358
FFY LPET+G+ LE+ME++F K
Sbjct: 468 FFYTMLPETQGRTLEDMEVLFGK 490
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 531,188,653
Number of Sequences: 1393205
Number of extensions: 11956883
Number of successful extensions: 30510
Number of sequences better than 10.0: 676
Number of HSP's better than 10.0 without gapping: 29209
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30262
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23997478008
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
