Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000308A_C01 KMC000308A_c01
(520 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P22534|GUNA_CALSA Endoglucanase A precursor (Endo-1,4-beta-gl... 42 0.004
gb|AAM43785.1| hypothetical protein [Dictyostelium discoideum] g... 42 0.006
ref|NP_486452.1| serine/threonine kinase [Nostoc sp. PCC 7120] g... 42 0.006
gb|ZP_00017330.1| hypothetical protein [Chloroflexus aurantiacus] 41 0.007
ref|ZP_00074116.1| hypothetical protein [Trichodesmium erythraeu... 41 0.009
>sp|P22534|GUNA_CALSA Endoglucanase A precursor (Endo-1,4-beta-glucanase A) (Cellulase A)
gi|7462025|pir||T17120 cellulase (EC 3.2.1.-) precursor,
thermoactive - Caldocellum saccharolyticum
gi|537500|gb|AAA91086.1| cellulase
Length = 1742
Score = 42.0 bits (97), Expect = 0.004
Identities = 18/39 (46%), Positives = 21/39 (53%)
Frame = -2
Query: 450 PTVQAEPTTGPAPPEVPSPAAEVTETNAPSPTTVPVSEP 334
PTV PT P P P+P T T P+PT+ PVS P
Sbjct: 866 PTVTVTPTPTPTPTVTPTPTVTATPTPTPTPTSTPVSTP 904
Score = 37.4 bits (85), Expect = 0.10
Identities = 16/39 (41%), Positives = 19/39 (48%)
Frame = -2
Query: 450 PTVQAEPTTGPAPPEVPSPAAEVTETNAPSPTTVPVSEP 334
PT A PT P P P+P T T P+PT+ P P
Sbjct: 655 PTPTATPTPTPTPTVTPTPTVTATPTPTPTPTSTPTVTP 693
Score = 35.8 bits (81), Expect = 0.30
Identities = 20/58 (34%), Positives = 24/58 (40%), Gaps = 8/58 (13%)
Frame = -2
Query: 477 ENPNVNGENPTVQAE--------PTTGPAPPEVPSPAAEVTETNAPSPTTVPVSEPLV 328
E P +G +PT A PT P P P+ T T P+PT P S P V
Sbjct: 634 EEPGTSGVSPTPTASVTPTPTPTPTATPTPTPTPTVTPTPTVTATPTPTPTPTSTPTV 691
Score = 35.0 bits (79), Expect = 0.52
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = -2
Query: 450 PTVQAEPTTGPAPPEVPSPAAEVTETNAPSPTTVPVSEP 334
PTV PT P P P+P A T T P+ T P P
Sbjct: 1065 PTVTPTPTVTPTPTPAPTPTATPTPTPTPTVTPTPTVAP 1103
Score = 33.9 bits (76), Expect = 1.2
Identities = 19/51 (37%), Positives = 22/51 (42%)
Frame = -2
Query: 486 GSDENPNVNGENPTVQAEPTTGPAPPEVPSPAAEVTETNAPSPTTVPVSEP 334
G+ P V PTV PT P P P+P T T P+PT P P
Sbjct: 1060 GATPAPTVT-PTPTVTPTPTPAPTPTATPTPTP--TPTVTPTPTVAPTPTP 1107
Score = 31.6 bits (70), Expect = 5.7
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 450 PTVQAEPTTGPAPPEVPSPAAEVTETNAPSPTTVPVS 340
PTV PT P P+P + T T P+P + P +
Sbjct: 667 PTVTPTPTVTATPTPTPTPTSTPTVTPTPTPVSTPAT 703
>gb|AAM43785.1| hypothetical protein [Dictyostelium discoideum]
gi|28829566|gb|AAO52084.1| similar to Dictyostelium
discoideum (Slime mold). Endoglucanase precursor (EC
3.2.1.4) (Endo-1,4-beta-glucanase) (Spore germination
protein 270-6) (Cellulase)
Length = 464
Score = 41.6 bits (96), Expect = 0.006
Identities = 21/59 (35%), Positives = 28/59 (46%), Gaps = 3/59 (5%)
Frame = -2
Query: 501 TTTKPGSDENPNVNGENPTVQAE---PTTGPAPPEVPSPAAEVTETNAPSPTTVPVSEP 334
TTT+P + P QA PT P+P + PSP T+T+ P+PT P P
Sbjct: 320 TTTQPPVTQTPTPTPTPTQTQAPTQTPTQTPSPTQTPSPTQTQTQTSTPTPTETPTETP 378
>ref|NP_486452.1| serine/threonine kinase [Nostoc sp. PCC 7120]
gi|25532288|pir||AE2107 serine/threonine kinase
[imported] - Nostoc sp. (strain PCC 7120)
gi|17131504|dbj|BAB74111.1| serine/threonine kinase
[Nostoc sp. PCC 7120]
Length = 704
Score = 41.6 bits (96), Expect = 0.006
Identities = 21/56 (37%), Positives = 28/56 (49%), Gaps = 4/56 (7%)
Frame = -2
Query: 501 TTTKPGSDENPNVNGENPTVQAEPTTGPA----PPEVPSPAAEVTETNAPSPTTVP 346
+T +D + ENPT EPT P+ P P+P+ TET P+PTT P
Sbjct: 649 STASTSADYRLTLTAENPTPPPEPTPTPSETPTPTPTPTPSETPTETPTPTPTTTP 704
Score = 34.3 bits (77), Expect = 0.88
Identities = 16/46 (34%), Positives = 21/46 (44%)
Frame = -2
Query: 474 NPNVNGENPTVQAEPTTGPAPPEVPSPAAEVTETNAPSPTTVPVSE 337
NP PT PT+ P PP VP+P + P+PT P +
Sbjct: 317 NPAPTNYPPTQAPTPTSVPIPPPVPTPDTIAIAPSLPTPTISPAPQ 362
>gb|ZP_00017330.1| hypothetical protein [Chloroflexus aurantiacus]
Length = 603
Score = 41.2 bits (95), Expect = 0.007
Identities = 23/57 (40%), Positives = 25/57 (43%)
Frame = -2
Query: 504 PTTTKPGSDENPNVNGENPTVQAEPTTGPAPPEVPSPAAEVTETNAPSPTTVPVSEP 334
PT T + E PTV A PTT +P VP P T T P PT P EP
Sbjct: 163 PTLTITPTPEPTATATPEPTVTATPTTTLSPTVVPRPTNTPTATFTPEPTATPTPEP 219
Score = 35.8 bits (81), Expect = 0.30
Identities = 22/54 (40%), Positives = 25/54 (45%)
Frame = -2
Query: 507 DPTTTKPGSDENPNVNGENPTVQAEPTTGPAPPEVPSPAAEVTETNAPSPTTVP 346
+PT T P + E PTV A PTT +P VP P T T P PT P
Sbjct: 210 EPTAT-PTPEPTATATPE-PTVTATPTTTLSPTVVPRPTNTPTATFTPEPTATP 261
Score = 31.6 bits (70), Expect = 5.7
Identities = 24/72 (33%), Positives = 28/72 (38%), Gaps = 2/72 (2%)
Frame = -2
Query: 507 DPTTTKPGSDENPNVNGENPTVQAEPTTGPAPPEVPSP--AAEVTETNAPSPTTVPVSEP 334
+PT T + P V PT PT P P P+ E T T P PT EP
Sbjct: 172 EPTAT---ATPEPTVTA-TPTTTLSPTVVPRPTNTPTATFTPEPTATPTPEPTATATPEP 227
Query: 333 LV*LAIPMAVLT 298
V A P L+
Sbjct: 228 TV-TATPTTTLS 238
Score = 31.2 bits (69), Expect = 7.5
Identities = 20/57 (35%), Positives = 21/57 (36%), Gaps = 4/57 (7%)
Frame = -2
Query: 504 PTTTKPGSDENPNVNGENPTVQAEPTTGPAP----PEVPSPAAEVTETNAPSPTTVP 346
PTTT + N T EPT P P P P T T SPT VP
Sbjct: 187 PTTTLSPTVVPRPTNTPTATFTPEPTATPTPEPTATATPEPTVTATPTTTLSPTVVP 243
>ref|ZP_00074116.1| hypothetical protein [Trichodesmium erythraeum IMS101]
Length = 672
Score = 40.8 bits (94), Expect = 0.009
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -2
Query: 513 NGDPTTTKPGSDENPNVNGENPTVQAEPTTGPAPPEVPSPAAEVTETNAPSPTTVPV 343
+G P T ++ PT PT P P E P+P T T AP+PT P+
Sbjct: 8 SGFPIPTPTPTEAPTPTEAPTPTEAPTPTEAPTPTEAPTPTETPTPTEAPTPTAPPI 64
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 449,545,589
Number of Sequences: 1393205
Number of extensions: 10313424
Number of successful extensions: 82743
Number of sequences better than 10.0: 1037
Number of HSP's better than 10.0 without gapping: 49198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 71980
length of database: 448,689,247
effective HSP length: 115
effective length of database: 288,470,672
effective search space used: 16442828304
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
