Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000249A_C01 KMC000249A_c01
(558 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_177507.1| putative protein kinase; protein id: At1g73660.... 111 7e-24
gb|AAM20478.1| putative protein kinase [Arabidopsis thaliana] 111 7e-24
ref|NP_173254.2| MAP kinase, putative; protein id: At1g18160.1, ... 102 3e-21
gb|AAM20643.1| MAP kinase, putative [Arabidopsis thaliana] 102 3e-21
gb|AAF97832.1|AC034107_15 Contains similarity to ethylene-induci... 102 3e-21
>ref|NP_177507.1| putative protein kinase; protein id: At1g73660.1, supported by cDNA:
gi_20466321 [Arabidopsis thaliana]
gi|25406282|pir||F96763 hypothetical protein F25P22.8
[imported] - Arabidopsis thaliana
gi|12324203|gb|AAG52069.1|AC012679_7 putative protein
kinase; 24662-20191 [Arabidopsis thaliana]
Length = 1030
Score = 111 bits (277), Expect = 7e-24
Identities = 51/69 (73%), Positives = 59/69 (84%)
Frame = -3
Query: 556 GGMNPMQVVGAVGFQHRRLDIPDDLDPAVANIIRQCWHTDPNLRPSFAEIMAALKPLPKP 377
G MNPMQVVGAVGFQHRRLDIPD +DPA+A++I +CW TD LRPSFAEIMA+LK L KP
Sbjct: 947 GKMNPMQVVGAVGFQHRRLDIPDFVDPAIADLISKCWQTDSKLRPSFAEIMASLKRLQKP 1006
Query: 376 ITGSQVHRP 350
+TGS + RP
Sbjct: 1007 VTGSNIPRP 1015
>gb|AAM20478.1| putative protein kinase [Arabidopsis thaliana]
Length = 1030
Score = 111 bits (277), Expect = 7e-24
Identities = 51/69 (73%), Positives = 59/69 (84%)
Frame = -3
Query: 556 GGMNPMQVVGAVGFQHRRLDIPDDLDPAVANIIRQCWHTDPNLRPSFAEIMAALKPLPKP 377
G MNPMQVVGAVGFQHRRLDIPD +DPA+A++I +CW TD LRPSFAEIMA+LK L KP
Sbjct: 947 GKMNPMQVVGAVGFQHRRLDIPDFVDPAIADLISKCWQTDSKLRPSFAEIMASLKRLQKP 1006
Query: 376 ITGSQVHRP 350
+TGS + RP
Sbjct: 1007 VTGSNIPRP 1015
>ref|NP_173254.2| MAP kinase, putative; protein id: At1g18160.1, supported by cDNA:
gi_20466651 [Arabidopsis thaliana]
Length = 992
Score = 102 bits (254), Expect = 3e-21
Identities = 49/71 (69%), Positives = 56/71 (78%)
Frame = -3
Query: 556 GGMNPMQVVGAVGFQHRRLDIPDDLDPAVANIIRQCWHTDPNLRPSFAEIMAALKPLPKP 377
G MNPMQVVGAVGFQHRRLDIP+ +DP +A+IIR+CW TDP LRPSF EIM +LK L KP
Sbjct: 914 GKMNPMQVVGAVGFQHRRLDIPEFVDPGIADIIRKCWQTDPRLRPSFGEIMDSLKQLQKP 973
Query: 376 ITGSQVHRPSA 344
I + V SA
Sbjct: 974 IQRAAVPSSSA 984
>gb|AAM20643.1| MAP kinase, putative [Arabidopsis thaliana]
Length = 992
Score = 102 bits (254), Expect = 3e-21
Identities = 49/71 (69%), Positives = 56/71 (78%)
Frame = -3
Query: 556 GGMNPMQVVGAVGFQHRRLDIPDDLDPAVANIIRQCWHTDPNLRPSFAEIMAALKPLPKP 377
G MNPMQVVGAVGFQHRRLDIP+ +DP +A+IIR+CW TDP LRPSF EIM +LK L KP
Sbjct: 914 GKMNPMQVVGAVGFQHRRLDIPEFVDPGIADIIRKCWQTDPRLRPSFGEIMDSLKQLQKP 973
Query: 376 ITGSQVHRPSA 344
I + V SA
Sbjct: 974 IQRAAVPSSSA 984
>gb|AAF97832.1|AC034107_15 Contains similarity to ethylene-inducible CTR1-like protein kinase
from Lycopersicon esculentum gb|AF110518 and contains a
eukaryotic protein kinase PF|00069 domain. ESTs
gb|AI997309, gb|Z18004, gb|AV522689 come from this gene.
[Arabidopsis thaliana]
Length = 966
Score = 102 bits (254), Expect = 3e-21
Identities = 49/71 (69%), Positives = 56/71 (78%)
Frame = -3
Query: 556 GGMNPMQVVGAVGFQHRRLDIPDDLDPAVANIIRQCWHTDPNLRPSFAEIMAALKPLPKP 377
G MNPMQVVGAVGFQHRRLDIP+ +DP +A+IIR+CW TDP LRPSF EIM +LK L KP
Sbjct: 888 GKMNPMQVVGAVGFQHRRLDIPEFVDPGIADIIRKCWQTDPRLRPSFGEIMDSLKQLQKP 947
Query: 376 ITGSQVHRPSA 344
I + V SA
Sbjct: 948 IQRAAVPSSSA 958
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 480,966,411
Number of Sequences: 1393205
Number of extensions: 10052198
Number of successful extensions: 22895
Number of sequences better than 10.0: 1005
Number of HSP's better than 10.0 without gapping: 22262
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22893
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19808345223
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
