Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000247A_C01 KMC000247A_c01
(968 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||G96662 probable aminopeptidase F24D7.4 [imported] - Arabido... 402 e-114
ref|NP_176563.1| putative aminopeptidase; protein id: At1g63770.... 402 e-114
gb|AAG52451.1|AC010852_8 putative aminopeptidase, 3' partial; 76... 402 e-114
gb|AAN72085.1| putative aminopeptidase [Arabidopsis thaliana] 375 e-103
ref|ZP_00067573.1| hypothetical protein [Microbulbifer degradans... 241 1e-62
>pir||G96662 probable aminopeptidase F24D7.4 [imported] - Arabidopsis thaliana
Length = 964
Score = 402 bits (1034), Expect(2) = e-114
Identities = 196/260 (75%), Positives = 225/260 (86%), Gaps = 1/260 (0%)
Frame = +3
Query: 192 KQLSRRLICSVATEDLAKQVEEPKMGTPREIFLKDYKMPDYYFESVNLEFSLGEESTKVS 371
KQ SRRLICSVATE + + E+ KM P+EIFLK+Y PDYYFE+V+L FSLGEE T VS
Sbjct: 54 KQNSRRLICSVATESVPDKAEDSKMDAPKEIFLKNYTKPDYYFETVDLSFSLGEEKTIVS 113
Query: 372 SKIAVFPRVEGSSPPLVLDGQDLSLVSIQINGKALKEEDYHLDARHLTIRSPPSGK-YDL 548
SKI V PRV+GSS LVLDG DL L+S+++ GK LKE DY LD+RHLT+ S P+ + + L
Sbjct: 114 SKIKVSPRVKGSSAALVLDGHDLKLLSVKVEGKLLKEGDYQLDSRHLTLPSLPAEESFVL 173
Query: 549 EIVTEIYPQKNTSLEGLYKSSGNFCTQCEAEGFRKVTFYQDRPDIMAKYTVRIEADKSLY 728
EI TEIYP KNTSLEGLYKSSGNFCTQCEAEGFRK+TFYQDRPDIMAKYT R+E DK+LY
Sbjct: 174 EIDTEIYPHKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTCRVEGDKTLY 233
Query: 729 PVLLSNGNLLEQGDLEDGKHYSVWEDPFKKPCYLFALVAGQLQSRDDTFTTRSGRKVSLR 908
PVLLSNGNL+ QGD+E G+HY++WEDPFKKPCYLFALVAGQL SRDDTFTTRSGR+VSL+
Sbjct: 234 PVLLSNGNLISQGDIEGGRHYALWEDPFKKPCYLFALVAGQLVSRDDTFTTRSGRQVSLK 293
Query: 909 IWTPADDVPKTAHAMYSLKA 968
IWTPA+D+PKTAHAMYSLKA
Sbjct: 294 IWTPAEDLPKTAHAMYSLKA 313
Score = 34.3 bits (77), Expect(2) = e-114
Identities = 21/61 (34%), Positives = 36/61 (58%), Gaps = 4/61 (6%)
Frame = +1
Query: 1 MARLVLPSKTLAFSRKSLLGLISPAPL----NYFQHTAKSSIRVRHFLASEVICKRSVAL 168
MARL++P ++ + +R +LLGL+S AP+ + + +A + R FL SE + S L
Sbjct: 1 MARLIIPCRSSSLARVNLLGLLSRAPVPVRSSCLRSSANRLTQHRPFLTSETHKQNSRRL 60
Query: 169 V 171
+
Sbjct: 61 I 61
>ref|NP_176563.1| putative aminopeptidase; protein id: At1g63770.1 [Arabidopsis
thaliana] gi|12324950|gb|AAG52429.1|AC011622_17 putative
aminopeptidase; 4537-10989 [Arabidopsis thaliana]
Length = 964
Score = 402 bits (1034), Expect(2) = e-114
Identities = 196/260 (75%), Positives = 225/260 (86%), Gaps = 1/260 (0%)
Frame = +3
Query: 192 KQLSRRLICSVATEDLAKQVEEPKMGTPREIFLKDYKMPDYYFESVNLEFSLGEESTKVS 371
KQ SRRLICSVATE + + E+ KM P+EIFLK+Y PDYYFE+V+L FSLGEE T VS
Sbjct: 54 KQNSRRLICSVATESVPDKAEDSKMDAPKEIFLKNYTKPDYYFETVDLSFSLGEEKTIVS 113
Query: 372 SKIAVFPRVEGSSPPLVLDGQDLSLVSIQINGKALKEEDYHLDARHLTIRSPPSGK-YDL 548
SKI V PRV+GSS LVLDG DL L+S+++ GK LKE DY LD+RHLT+ S P+ + + L
Sbjct: 114 SKIKVSPRVKGSSAALVLDGHDLKLLSVKVEGKLLKEGDYQLDSRHLTLPSLPAEESFVL 173
Query: 549 EIVTEIYPQKNTSLEGLYKSSGNFCTQCEAEGFRKVTFYQDRPDIMAKYTVRIEADKSLY 728
EI TEIYP KNTSLEGLYKSSGNFCTQCEAEGFRK+TFYQDRPDIMAKYT R+E DK+LY
Sbjct: 174 EIDTEIYPHKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTCRVEGDKTLY 233
Query: 729 PVLLSNGNLLEQGDLEDGKHYSVWEDPFKKPCYLFALVAGQLQSRDDTFTTRSGRKVSLR 908
PVLLSNGNL+ QGD+E G+HY++WEDPFKKPCYLFALVAGQL SRDDTFTTRSGR+VSL+
Sbjct: 234 PVLLSNGNLISQGDIEGGRHYALWEDPFKKPCYLFALVAGQLVSRDDTFTTRSGRQVSLK 293
Query: 909 IWTPADDVPKTAHAMYSLKA 968
IWTPA+D+PKTAHAMYSLKA
Sbjct: 294 IWTPAEDLPKTAHAMYSLKA 313
Score = 34.3 bits (77), Expect(2) = e-114
Identities = 21/61 (34%), Positives = 36/61 (58%), Gaps = 4/61 (6%)
Frame = +1
Query: 1 MARLVLPSKTLAFSRKSLLGLISPAPL----NYFQHTAKSSIRVRHFLASEVICKRSVAL 168
MARL++P ++ + +R +LLGL+S AP+ + + +A + R FL SE + S L
Sbjct: 1 MARLIIPCRSSSLARVNLLGLLSRAPVPVRSSCLRSSANRLTQHRPFLTSETHKQNSRRL 60
Query: 169 V 171
+
Sbjct: 61 I 61
>gb|AAG52451.1|AC010852_8 putative aminopeptidase, 3' partial; 76469-79469 [Arabidopsis
thaliana]
Length = 429
Score = 402 bits (1034), Expect(2) = e-114
Identities = 196/260 (75%), Positives = 225/260 (86%), Gaps = 1/260 (0%)
Frame = +3
Query: 192 KQLSRRLICSVATEDLAKQVEEPKMGTPREIFLKDYKMPDYYFESVNLEFSLGEESTKVS 371
KQ SRRLICSVATE + + E+ KM P+EIFLK+Y PDYYFE+V+L FSLGEE T VS
Sbjct: 54 KQNSRRLICSVATESVPDKAEDSKMDAPKEIFLKNYTKPDYYFETVDLSFSLGEEKTIVS 113
Query: 372 SKIAVFPRVEGSSPPLVLDGQDLSLVSIQINGKALKEEDYHLDARHLTIRSPPSGK-YDL 548
SKI V PRV+GSS LVLDG DL L+S+++ GK LKE DY LD+RHLT+ S P+ + + L
Sbjct: 114 SKIKVSPRVKGSSAALVLDGHDLKLLSVKVEGKLLKEGDYQLDSRHLTLPSLPAEESFVL 173
Query: 549 EIVTEIYPQKNTSLEGLYKSSGNFCTQCEAEGFRKVTFYQDRPDIMAKYTVRIEADKSLY 728
EI TEIYP KNTSLEGLYKSSGNFCTQCEAEGFRK+TFYQDRPDIMAKYT R+E DK+LY
Sbjct: 174 EIDTEIYPHKNTSLEGLYKSSGNFCTQCEAEGFRKITFYQDRPDIMAKYTCRVEGDKTLY 233
Query: 729 PVLLSNGNLLEQGDLEDGKHYSVWEDPFKKPCYLFALVAGQLQSRDDTFTTRSGRKVSLR 908
PVLLSNGNL+ QGD+E G+HY++WEDPFKKPCYLFALVAGQL SRDDTFTTRSGR+VSL+
Sbjct: 234 PVLLSNGNLISQGDIEGGRHYALWEDPFKKPCYLFALVAGQLVSRDDTFTTRSGRQVSLK 293
Query: 909 IWTPADDVPKTAHAMYSLKA 968
IWTPA+D+PKTAHAMYSLKA
Sbjct: 294 IWTPAEDLPKTAHAMYSLKA 313
Score = 34.3 bits (77), Expect(2) = e-114
Identities = 21/61 (34%), Positives = 36/61 (58%), Gaps = 4/61 (6%)
Frame = +1
Query: 1 MARLVLPSKTLAFSRKSLLGLISPAPL----NYFQHTAKSSIRVRHFLASEVICKRSVAL 168
MARL++P ++ + +R +LLGL+S AP+ + + +A + R FL SE + S L
Sbjct: 1 MARLIIPCRSSSLARVNLLGLLSRAPVPVRSSCLRSSANRLTQHRPFLTSETHKQNSRRL 60
Query: 169 V 171
+
Sbjct: 61 I 61
>gb|AAN72085.1| putative aminopeptidase [Arabidopsis thaliana]
Length = 883
Score = 375 bits (963), Expect = e-103
Identities = 181/236 (76%), Positives = 207/236 (87%), Gaps = 1/236 (0%)
Frame = +3
Query: 264 MGTPREIFLKDYKMPDYYFESVNLEFSLGEESTKVSSKIAVFPRVEGSSPPLVLDGQDLS 443
M P+EIFLK+Y PDYYFE+V+L FSLGEE T VSSKI V PRV+GSS LVLDG DL
Sbjct: 1 MDAPKEIFLKNYTKPDYYFETVDLSFSLGEEKTIVSSKIKVSPRVKGSSAALVLDGHDLK 60
Query: 444 LVSIQINGKALKEEDYHLDARHLTIRSPPSGK-YDLEIVTEIYPQKNTSLEGLYKSSGNF 620
L+S+++ GK LKE DY LD+RHLT+ S P+ + + LEI TEIYP KNTSLEGLYKSSGNF
Sbjct: 61 LLSVKVEGKLLKEGDYQLDSRHLTLPSLPAEESFVLEIDTEIYPHKNTSLEGLYKSSGNF 120
Query: 621 CTQCEAEGFRKVTFYQDRPDIMAKYTVRIEADKSLYPVLLSNGNLLEQGDLEDGKHYSVW 800
CTQCEAEGFRK+TFYQDRPDIMAKYT R+E DK+LYPVLLSNGNL+ QGD+E G+HY++W
Sbjct: 121 CTQCEAEGFRKITFYQDRPDIMAKYTCRVEGDKTLYPVLLSNGNLISQGDIEGGRHYALW 180
Query: 801 EDPFKKPCYLFALVAGQLQSRDDTFTTRSGRKVSLRIWTPADDVPKTAHAMYSLKA 968
EDPFKKPCYLFALVAGQL SRDDTFTTRSGR+VSL+IWTPA+D+PKTAHAMYSLKA
Sbjct: 181 EDPFKKPCYLFALVAGQLVSRDDTFTTRSGRQVSLKIWTPAEDLPKTAHAMYSLKA 236
>ref|ZP_00067573.1| hypothetical protein [Microbulbifer degradans 2-40]
Length = 890
Score = 241 bits (615), Expect = 1e-62
Identities = 122/231 (52%), Positives = 157/231 (67%)
Frame = +3
Query: 273 PREIFLKDYKMPDYYFESVNLEFSLGEESTKVSSKIAVFPRVEGSSPPLVLDGQDLSLVS 452
P+ I+LKDY PDY+ E LEF L E T V SK+ + + PLVL+GQ++ LVS
Sbjct: 6 PKTIYLKDYSAPDYFIEKTELEFDLFEADTLVRSKLTIARNTAKPAAPLVLNGQNVELVS 65
Query: 453 IQINGKALKEEDYHLDARHLTIRSPPSGKYDLEIVTEIYPQKNTSLEGLYKSSGNFCTQC 632
+ ING+ L DY +D LTI + P + E VT+I PQ NTSLEGLYKS FCTQC
Sbjct: 66 VAINGEVLSASDYTVDDVSLTISNLPD-TFIFECVTKIQPQDNTSLEGLYKSRTMFCTQC 124
Query: 633 EAEGFRKVTFYQDRPDIMAKYTVRIEADKSLYPVLLSNGNLLEQGDLEDGKHYSVWEDPF 812
EAEGFRK+T+Y DRPD+M+ +T ++ ADK +PVLLSNGN + G+L+ G+H+ W DPF
Sbjct: 125 EAEGFRKITYYLDRPDVMSVFTTKVIADKQKFPVLLSNGNEVGAGELDGGRHWVEWNDPF 184
Query: 813 KKPCYLFALVAGQLQSRDDTFTTRSGRKVSLRIWTPADDVPKTAHAMYSLK 965
KKP YLFALVAG L + D FTT+SGR++ LRI+ D K +AM +LK
Sbjct: 185 KKPAYLFALVAGDLINVDSHFTTQSGREILLRIFIEPKDKNKCDYAMQALK 235
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 807,702,396
Number of Sequences: 1393205
Number of extensions: 17472742
Number of successful extensions: 42322
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 40480
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42223
length of database: 448,689,247
effective HSP length: 123
effective length of database: 277,325,032
effective search space used: 55187681368
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
