Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000245A_C02 KMC000245A_c02
(805 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176191.1| chromaffin granule ATPase II homolog, putative;... 222 4e-57
sp|Q9XIE6|ALA3_ARATH Potential phospholipid-transporting ATPase ... 74 3e-12
emb|CAC83304.1| putative ATPase [Pinus pinaster] 61 2e-08
ref|NP_596486.1| putative calcium-transporting atpase [Schizosac... 45 0.002
ref|NP_009376.1| P-type ATPase, potential aminophospholipid tran... 42 0.011
>ref|NP_176191.1| chromaffin granule ATPase II homolog, putative; protein id:
At1g59820.1, supported by cDNA: gi_20147218 [Arabidopsis
thaliana] gi|20147219|gb|AAM10325.1| At1g59820/F23H11_14
[Arabidopsis thaliana]
Length = 1213
Score = 222 bits (566), Expect = 4e-57
Identities = 101/152 (66%), Positives = 125/152 (81%)
Frame = -1
Query: 805 IFVLIDSVISTPYDRQENVYFVIYVLMNTLYFYLTLILVPAAALFGDFVYQGVQRWFFPY 626
+F + I TP+DR ENVYFVIYVLM+T YFY TL+LVP +L GDF++QGV+RWFFPY
Sbjct: 1063 VFAFVYCGIMTPHDRNENVYFVIYVLMSTFYFYFTLLLVPIVSLLGDFIFQGVERWFFPY 1122
Query: 625 DYQIIQEMHKHENDDTGRAQLLETGDRLSPSEGRSYALSQLSRETTKHTGFTFDSPGYES 446
DYQI+QE+H+HE+ D +A LE + L+P E RSYA+SQL RE +KHTGF FDSPGYES
Sbjct: 1123 DYQIVQEIHRHES-DASKADQLEVENELTPQEARSYAISQLPRELSKHTGFAFDSPGYES 1181
Query: 445 FFAAQFGVHAPQRAWDVARRASMRSRPKIVQK 350
FFA+Q G++APQ+AWDVARRASMRSRPK+ +K
Sbjct: 1182 FFASQLGIYAPQKAWDVARRASMRSRPKVPKK 1213
>sp|Q9XIE6|ALA3_ARATH Potential phospholipid-transporting ATPase 3 (Aminophospholipid
flippase 3) gi|25404236|pir||C96622 probable ATPase
F23H11.14 [imported] - Arabidopsis thaliana
gi|5080816|gb|AAD39325.1|AC007258_14 Putative ATPase
[Arabidopsis thaliana]
Length = 1123
Score = 73.9 bits (180), Expect = 3e-12
Identities = 32/52 (61%), Positives = 40/52 (76%)
Frame = -1
Query: 805 IFVLIDSVISTPYDRQENVYFVIYVLMNTLYFYLTLILVPAAALFGDFVYQG 650
+F + I TP+DR ENVYFVIYVLM+T YFY TL+LVP +L GDF++QG
Sbjct: 1063 VFAFVYCGIMTPHDRNENVYFVIYVLMSTFYFYFTLLLVPIVSLLGDFIFQG 1114
>emb|CAC83304.1| putative ATPase [Pinus pinaster]
Length = 133
Score = 60.8 bits (146), Expect = 2e-08
Identities = 28/52 (53%), Positives = 41/52 (78%)
Frame = -1
Query: 805 IFVLIDSVISTPYDRQENVYFVIYVLMNTLYFYLTLILVPAAALFGDFVYQG 650
+F+ + S I T +DRQ +VY+VI VL++T YF+L++ILVP AL GDF++QG
Sbjct: 82 LFMCLYSGIRTRHDRQASVYYVICVLVSTWYFWLSIILVPLVALLGDFLFQG 133
>ref|NP_596486.1| putative calcium-transporting atpase [Schizosaccharomyces pombe]
gi|7492445|pir||T40737 probable calcium-transporting
atpase - fission yeast (Schizosaccharomyces pombe)
gi|3850108|emb|CAA21897.1| putative calcium-transporting
atpase [Schizosaccharomyces pombe]
Length = 1258
Score = 44.7 bits (104), Expect = 0.002
Identities = 22/75 (29%), Positives = 41/75 (54%)
Frame = -1
Query: 805 IFVLIDSVISTPYDRQENVYFVIYVLMNTLYFYLTLILVPAAALFGDFVYQGVQRWFFPY 626
+F+ I +V + + Y +I L L F+ +L+++P AL DFV++ R ++P
Sbjct: 1128 VFMPIYAVAAPAIGFSKEYYGIIPHLYGNLKFWASLLVLPTIALMRDFVWKYSSRMYYPE 1187
Query: 625 DYQIIQEMHKHENDD 581
+Y +QE+ K+ D
Sbjct: 1188 EYHYVQEIQKYNVTD 1202
>ref|NP_009376.1| P-type ATPase, potential aminophospholipid translocase; Drs2p
[Saccharomyces cerevisiae] gi|728905|sp|P39524|ATC3_YEAST
Potential phospholipid-transporting ATPase 1
gi|1078206|pir||S51995 probable ATPase (EC 3.6.1.-) DRS2
- yeast (Saccharomyces cerevisiae)
gi|171114|gb|AAA16891.1| ATPase gi|595560|gb|AAC05006.1|
Drs2p: Membrane spanning Ca-ATPase(P-type), member of the
cation transport(E1-E2) ATPase [Saccharomyces cerevisiae]
Length = 1355
Score = 42.0 bits (97), Expect = 0.011
Identities = 19/45 (42%), Positives = 30/45 (66%)
Frame = -1
Query: 712 FYLTLILVPAAALFGDFVYQGVQRWFFPYDYQIIQEMHKHENDDT 578
F+LTLI++P AL DF+++ +R + P Y +IQEM K+ D+
Sbjct: 1205 FWLTLIVLPIFALVRDFLWKYYKRMYEPETYHVIQEMQKYNISDS 1249
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 695,493,097
Number of Sequences: 1393205
Number of extensions: 15368624
Number of successful extensions: 41029
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 39011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41023
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 40896270532
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
