Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000235A_C02 KMC000235A_c02
(693 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_186862.1| leucine-rich repeat transmembrane protein kinas... 158 6e-38
gb|AAM47583.1| putative protein kinase [Sorghum bicolor] 121 8e-27
gb|AAF27063.1|AC008262_12 F4N2.23 [Arabidopsis thaliana] 120 1e-26
ref|NP_177087.1| receptor protein kinase, putative; protein id: ... 120 1e-26
dbj|BAC42107.1| putative protein kinase [Arabidopsis thaliana] 70 2e-11
>ref|NP_186862.1| leucine-rich repeat transmembrane protein kinase, putative; protein
id: At3g02130.1 [Arabidopsis thaliana]
gi|6041804|gb|AAF02124.1|AC009755_17 putative protein
kinase [Arabidopsis thaliana]
gi|6513945|gb|AAF14849.1|AC011664_31 putative protein
kinase [Arabidopsis thaliana]
Length = 1151
Score = 158 bits (400), Expect = 6e-38
Identities = 75/83 (90%), Positives = 79/83 (94%)
Frame = -2
Query: 692 KKALDPSFSSYGNGFNIVAWACMLLRQGQAKDFFTAGLWDAAPADDLVEVLHLAVVCTVE 513
KKALDPSF SYGNGFNIV WACMLLRQG+AK+FFTAGLWDA P DDLVEVLHLAVVCTV+
Sbjct: 1069 KKALDPSFVSYGNGFNIVQWACMLLRQGRAKEFFTAGLWDAGPHDDLVEVLHLAVVCTVD 1128
Query: 512 TLSTRPTMKQVVRRLKQLQPPSC 444
+LSTRPTMKQVVRRLKQLQPPSC
Sbjct: 1129 SLSTRPTMKQVVRRLKQLQPPSC 1151
>gb|AAM47583.1| putative protein kinase [Sorghum bicolor]
Length = 1053
Score = 121 bits (304), Expect = 8e-27
Identities = 54/71 (76%), Positives = 64/71 (90%)
Frame = -2
Query: 692 KKALDPSFSSYGNGFNIVAWACMLLRQGQAKDFFTAGLWDAAPADDLVEVLHLAVVCTVE 513
KKALDPSFS YGNGFNIVAWACMLL++G++++FF GLWD AP DDLVE+LHL + CTVE
Sbjct: 851 KKALDPSFSPYGNGFNIVAWACMLLQKGRSREFFIEGLWDVAPHDDLVEILHLGIKCTVE 910
Query: 512 TLSTRPTMKQV 480
+LS+RPTMKQV
Sbjct: 911 SLSSRPTMKQV 921
>gb|AAF27063.1|AC008262_12 F4N2.23 [Arabidopsis thaliana]
Length = 857
Score = 120 bits (302), Expect = 1e-26
Identities = 56/80 (70%), Positives = 68/80 (85%)
Frame = -2
Query: 692 KKALDPSFSSYGNGFNIVAWACMLLRQGQAKDFFTAGLWDAAPADDLVEVLHLAVVCTVE 513
K+ALDPSFSS+ NGFNIV+WA M+L QG+AK+ FT GLW+ P DDLVEVLHLA+ CTV+
Sbjct: 775 KRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWETGPPDDLVEVLHLALKCTVD 834
Query: 512 TLSTRPTMKQVVRRLKQLQP 453
+LS RPTMKQ VR LK++QP
Sbjct: 835 SLSIRPTMKQAVRLLKRIQP 854
>ref|NP_177087.1| receptor protein kinase, putative; protein id: At1g69270.1,
supported by cDNA: gi_20466783, supported by cDNA:
gi_4204848 [Arabidopsis thaliana]
gi|25404808|pir||G96716 hypothetical protein F23O10.15
[imported] - Arabidopsis thaliana
gi|4204849|gb|AAD11518.1| protein kinase [Arabidopsis
thaliana] gi|12325075|gb|AAG52484.1|AC018364_2 putative
receptor-like protein kinase; 54409-56031 [Arabidopsis
thaliana] gi|20466784|gb|AAM20709.1| receptor protein
kinase, putative [Arabidopsis thaliana]
Length = 540
Score = 120 bits (302), Expect = 1e-26
Identities = 56/80 (70%), Positives = 68/80 (85%)
Frame = -2
Query: 692 KKALDPSFSSYGNGFNIVAWACMLLRQGQAKDFFTAGLWDAAPADDLVEVLHLAVVCTVE 513
K+ALDPSFSS+ NGFNIV+WA M+L QG+AK+ FT GLW+ P DDLVEVLHLA+ CTV+
Sbjct: 458 KRALDPSFSSHENGFNIVSWAHMMLSQGKAKEVFTTGLWETGPPDDLVEVLHLALKCTVD 517
Query: 512 TLSTRPTMKQVVRRLKQLQP 453
+LS RPTMKQ VR LK++QP
Sbjct: 518 SLSIRPTMKQAVRLLKRIQP 537
>dbj|BAC42107.1| putative protein kinase [Arabidopsis thaliana]
Length = 946
Score = 70.5 bits (171), Expect = 2e-11
Identities = 31/38 (81%), Positives = 35/38 (91%)
Frame = -2
Query: 692 KKALDPSFSSYGNGFNIVAWACMLLRQGQAKDFFTAGL 579
KKALDPSF SYGNGFNIV WACMLLRQG+AK+FF +G+
Sbjct: 903 KKALDPSFVSYGNGFNIVQWACMLLRQGRAKEFFHSGI 940
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 581,256,813
Number of Sequences: 1393205
Number of extensions: 12142810
Number of successful extensions: 29410
Number of sequences better than 10.0: 158
Number of HSP's better than 10.0 without gapping: 28298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29387
length of database: 448,689,247
effective HSP length: 119
effective length of database: 282,897,852
effective search space used: 31401661572
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
