Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000218A_C01 KMC000218A_c01
(1011 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_563635.1| carbonyl reductase, putative; protein id: At1g0... 104 2e-21
pir||G86149 hypothetical protein T1N6.22 - Arabidopsis thaliana ... 104 2e-21
ref|NP_179996.1| putative carbonyl reductase; protein id: At2g24... 100 5e-20
ref|NP_191681.1| putative protein; protein id: At3g61220.1, supp... 98 2e-19
dbj|BAC10339.1| carbonyl reductase -like protein [Oryza sativa (... 72 2e-11
>ref|NP_563635.1| carbonyl reductase, putative; protein id: At1g01800.1 [Arabidopsis
thaliana] gi|13878161|gb|AAK44158.1|AF370343_1 putative
carbonyl reductase [Arabidopsis thaliana]
gi|22136772|gb|AAM91730.1| putative carbonyl reductase
[Arabidopsis thaliana]
Length = 295
Score = 104 bits (259), Expect = 2e-21
Identities = 48/76 (63%), Positives = 64/76 (84%)
Frame = -1
Query: 1011 YIMSKAAMNAYTRILARKYPTFCINSVCPGWVKTDITANNGLLTVEEGAATPVRLALLPN 832
YI+SKAA+ A TR+LA+++ +F INSVCPG+V T+I N G+L+VEEGAA+PV+LAL+PN
Sbjct: 220 YILSKAAVIALTRVLAKRHKSFIINSVCPGFVNTEINFNTGILSVEEGAASPVKLALVPN 279
Query: 831 GSPSGLFYHRGEVSSF 784
G PSGLF+ R VS+F
Sbjct: 280 GDPSGLFFDRANVSNF 295
>pir||G86149 hypothetical protein T1N6.22 - Arabidopsis thaliana
gi|8671854|gb|AAF78417.1|AC009273_23 Contains similarity
to a retinal short-chain dehydrogenase/reductase retSDR4
from Homo sapiens gb|AF126782. It contains a short chain
dehydrogenase PF|00106 domain. [Arabidopsis thaliana]
Length = 325
Score = 104 bits (259), Expect = 2e-21
Identities = 48/76 (63%), Positives = 64/76 (84%)
Frame = -1
Query: 1011 YIMSKAAMNAYTRILARKYPTFCINSVCPGWVKTDITANNGLLTVEEGAATPVRLALLPN 832
YI+SKAA+ A TR+LA+++ +F INSVCPG+V T+I N G+L+VEEGAA+PV+LAL+PN
Sbjct: 250 YILSKAAVIALTRVLAKRHKSFIINSVCPGFVNTEINFNTGILSVEEGAASPVKLALVPN 309
Query: 831 GSPSGLFYHRGEVSSF 784
G PSGLF+ R VS+F
Sbjct: 310 GDPSGLFFDRANVSNF 325
>ref|NP_179996.1| putative carbonyl reductase; protein id: At2g24190.1 [Arabidopsis
thaliana] gi|25412197|pir||F84633 probable carbonyl
reductase [imported] - Arabidopsis thaliana
gi|4115379|gb|AAD03380.1| putative carbonyl reductase
[Arabidopsis thaliana]
Length = 296
Score = 100 bits (248), Expect = 5e-20
Identities = 48/77 (62%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
Frame = -1
Query: 1011 YIMSKAAMNAYTRILARKYPTFCINSVCPGWVKTDITANNGLLTVEEGAATPVRLALLPN 832
Y++SKA +NAYTRILA+K+P +NSVCPG+VKTD+ G+L+VEEGA++PVRLALLP+
Sbjct: 220 YVVSKAGLNAYTRILAKKHPEIRVNSVCPGFVKTDMNFKTGILSVEEGASSPVRLALLPH 279
Query: 831 -GSPSGLFYHRGEVSSF 784
SPSG F+ R +VS F
Sbjct: 280 QESPSGCFFDRKQVSEF 296
>ref|NP_191681.1| putative protein; protein id: At3g61220.1, supported by cDNA:
gi_15028054, supported by cDNA: gi_20259056 [Arabidopsis
thaliana] gi|11358115|pir||T47914 hypothetical protein
T20K12.120 - Arabidopsis thaliana
gi|6850889|emb|CAB71052.1| putative protein [Arabidopsis
thaliana] gi|15028055|gb|AAK76558.1| unknown protein
[Arabidopsis thaliana] gi|20259057|gb|AAM14244.1| unknown
protein [Arabidopsis thaliana]
Length = 296
Score = 98.2 bits (243), Expect = 2e-19
Identities = 45/77 (58%), Positives = 64/77 (82%), Gaps = 1/77 (1%)
Frame = -1
Query: 1011 YIMSKAAMNAYTRILARKYPTFCINSVCPGWVKTDITANNGLLTVEEGAATPVRLALLPN 832
Y++SKA++N YTR+LA+K+P F +N+VCPG+VKTD+ G+L+VEEGA++PVRLALLP+
Sbjct: 220 YVVSKASLNGYTRVLAKKHPEFRVNAVCPGFVKTDMNFKTGVLSVEEGASSPVRLALLPH 279
Query: 831 -GSPSGLFYHRGEVSSF 784
+PSG F+ R +VS F
Sbjct: 280 QETPSGCFFSRKQVSEF 296
>dbj|BAC10339.1| carbonyl reductase -like protein [Oryza sativa (japonica
cultivar-group)]
Length = 275
Score = 71.6 bits (174), Expect = 2e-11
Identities = 34/73 (46%), Positives = 48/73 (65%)
Frame = -1
Query: 1011 YIMSKAAMNAYTRILARKYPTFCINSVCPGWVKTDITANNGLLTVEEGAATPVRLALLPN 832
Y MSK +N YTRILA+++P IN V PG+V T+I N G++ EEGA V+ ALLP
Sbjct: 199 YSMSKTVVNLYTRILAKRHPEMRINCVHPGFVNTEINWNTGIIPPEEGARGAVKAALLPQ 258
Query: 831 GSPSGLFYHRGEV 793
P+G ++ + E+
Sbjct: 259 DGPTGCYFDQTEL 271
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 893,432,352
Number of Sequences: 1393205
Number of extensions: 20581929
Number of successful extensions: 60089
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 56500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 59894
length of database: 448,689,247
effective HSP length: 124
effective length of database: 275,931,827
effective search space used: 58497547324
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
