Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000185A_C01 KMC000185A_c01
(610 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB90164.1| putative receptor-like protein kinase [Oryza sat... 111 8e-24
dbj|BAB84498.1| putative receptor-like protein kinase [Oryza sat... 106 3e-22
sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZMPK1 prec... 103 2e-21
dbj|BAB84497.1| putative receptor-like protein kinase [Oryza sat... 102 5e-21
ref|NP_198672.1| putative protein; protein id: At5g38560.1, supp... 100 1e-20
>dbj|BAB90164.1| putative receptor-like protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 823
Score = 111 bits (277), Expect = 8e-24
Identities = 58/142 (40%), Positives = 91/142 (63%)
Frame = -2
Query: 606 VADFGLSKLLQRDDLNXSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGK 427
++DFGL+K+ QR DL+ + IRGTRGYMAPEWV +LPIT KVDVYSYG+V+LE++ G
Sbjct: 668 ISDFGLAKMQQRRDLDDPASFSIRGTRGYMAPEWVSSLPITEKVDVYSYGVVLLELVRGA 727
Query: 426 SPMTGIIQILEGAEPHHERLVTWVREKKRSGAKGASWVEQVVDPALGKNYDMNKMEILAT 247
+ AE +LV +RE + G + +WV +VD L ++ +++ ++
Sbjct: 728 RMADLATDSVGDAEIAMRQLVWKIREGLKIGDR--TWVISLVDRRLNGSFVYSQVALMLE 785
Query: 246 VALECVAEDKDMRPSMSQVYQR 181
VA C+ ++++ RPSM+ V ++
Sbjct: 786 VATSCLEKERNQRPSMNDVVKK 807
>dbj|BAB84498.1| putative receptor-like protein kinase [Oryza sativa (japonica
cultivar-group)] gi|20161595|dbj|BAB90516.1| putative
receptor-like protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 797
Score = 106 bits (264), Expect = 3e-22
Identities = 62/165 (37%), Positives = 96/165 (57%)
Frame = -2
Query: 606 VADFGLSKLLQRDDLNXSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGK 427
+ADFGL+KL +RD + + F+ +RGT GYMAPEW NLPI +KVDVYSYG+V+LE++TG
Sbjct: 649 IADFGLAKLAKRDSTSFN-FTHMRGTMGYMAPEWALNLPINAKVDVYSYGVVLLEIVTGI 707
Query: 426 SPMTGIIQILEGAEPHHERLVTWVREKKRSGAKGASWVEQVVDPALGKNYDMNKMEILAT 247
+GI+ + +V+E K+ A G V +VD L ++D ++ +
Sbjct: 708 RVSSGIV-----VDERQVEFPEFVQEAKKIQATGN--VTDLVDDRLHGHFDPEQVITMVK 760
Query: 246 VALECVAEDKDMRPSMSQVYQRLQAGS*T*FLILDDHGYFFPCIS 112
VAL C+ E++ RP+M ++ + L ++ DD + P S
Sbjct: 761 VALSCL-EERSKRPTMDEILKAL--------MLCDDEDDYHPAYS 796
>sp|P17801|KPRO_MAIZE Putative receptor protein kinase ZMPK1 precursor
gi|100913|pir||S10930 S-receptor kinase (EC 2.7.1.-)
homolog PK1 precursor - maize gi|22432|emb|CAA36611.1|
precursor protein (AA -26 to 791) [Zea mays]
gi|22436|emb|CAA47962.1| receptor-like protein kinase
[Zea mays] gi|226927|prf||1611404A receptor protein
kinase
Length = 817
Score = 103 bits (256), Expect = 2e-21
Identities = 58/145 (40%), Positives = 86/145 (59%), Gaps = 2/145 (1%)
Frame = -2
Query: 606 VADFGLSKLLQRDDLNXSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGK 427
+ DFGL KLL R + + S +RGT GY+APEWV +LPIT+KVDVYSYG+V+LE++TG
Sbjct: 674 ITDFGLVKLLNRGG-STQNVSHVRGTLGYIAPEWVSSLPITAKVDVYSYGVVLLELLTG- 731
Query: 426 SPMTGIIQILEGAEPHHERLVTWVR--EKKRSGAKGASWVEQVVDPALGKNYDMNKMEIL 253
T + +++ G + H L VR K G + SW++ +D L + + + L
Sbjct: 732 ---TRVSELVGGTDEVHSMLRKLVRMLSAKLEGEE-QSWIDGYLDSKLNRPVNYVQARTL 787
Query: 252 ATVALECVAEDKDMRPSMSQVYQRL 178
+A+ C+ ED+ RP+M Q L
Sbjct: 788 IKLAVSCLEEDRSKRPTMEHAVQTL 812
>dbj|BAB84497.1| putative receptor-like protein kinase [Oryza sativa (japonica
cultivar-group)] gi|20161594|dbj|BAB90515.1| putative
receptor-like protein kinase [Oryza sativa (japonica
cultivar-group)]
Length = 795
Score = 102 bits (253), Expect = 5e-21
Identities = 59/159 (37%), Positives = 95/159 (59%)
Frame = -2
Query: 606 VADFGLSKLLQRDDLNXSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGK 427
+ADFGLSKL +RD + +F+ +RGT GYMAPEW NLPI +KVDVYSYG+V+LE++TG
Sbjct: 648 IADFGLSKLSKRDS-STFNFTHMRGTMGYMAPEWALNLPINAKVDVYSYGVVLLEIVTGT 706
Query: 426 SPMTGIIQILEGAEPHHERLVTWVREKKRSGAKGASWVEQVVDPALGKNYDMNKMEILAT 247
+GI E + L+ +V+ K+ G ++ +VD L +++ ++ + +
Sbjct: 707 RVSSGIT-----IEEENIDLMQFVQVVKQMLTSG-EVLDTIVDSRLKGHFNCDQAKAMVK 760
Query: 246 VALECVAEDKDMRPSMSQVYQRLQAGS*T*FLILDDHGY 130
A+ C+ E++ RP+M Q+ + L ++ DD Y
Sbjct: 761 AAISCL-EERSKRPTMDQIVKDL--------MVYDDEDY 790
>ref|NP_198672.1| putative protein; protein id: At5g38560.1, supported by cDNA:
gi_15983496, supported by cDNA: gi_18700152 [Arabidopsis
thaliana] gi|10176824|dbj|BAB10146.1| contains
similarity to protein kinase~gene_id:MBB18.10
[Arabidopsis thaliana]
gi|15983497|gb|AAL11616.1|AF424623_1 AT5g38560/MBB18_10
[Arabidopsis thaliana] gi|18700153|gb|AAL77688.1|
AT5g38560/MBB18_10 [Arabidopsis thaliana]
gi|21360463|gb|AAM47347.1| AT5g38560/MBB18_10
[Arabidopsis thaliana]
Length = 681
Score = 100 bits (249), Expect = 1e-20
Identities = 57/144 (39%), Positives = 83/144 (57%), Gaps = 1/144 (0%)
Frame = -2
Query: 606 VADFGLSKLLQRDDLNXSSFSRIRGTRGYMAPEWVFNLPITSKVDVYSYGIVVLEMITGK 427
VADFGL+K+ Q DLN +R+ GT GYMAPE+ + ++ K DVYSYG+++LE+ITG+
Sbjct: 479 VADFGLAKIAQELDLNTHVSTRVMGTFGYMAPEYATSGKLSEKADVYSYGVILLELITGR 538
Query: 426 SPMTGIIQILEGAEP-HHERLVTWVREKKRSGAKGASWVEQVVDPALGKNYDMNKMEILA 250
P ++ ++P E LV W R + + +++VDP LGKN+ +M +
Sbjct: 539 KP-------VDTSQPLGDESLVEWARPLLGQAIENEEF-DELVDPRLGKNFIPGEMFRMV 590
Query: 249 TVALECVAEDKDMRPSMSQVYQRL 178
A CV RP MSQV + L
Sbjct: 591 EAAAACVRHSAAKRPKMSQVVRAL 614
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 555,085,430
Number of Sequences: 1393205
Number of extensions: 13284633
Number of successful extensions: 47364
Number of sequences better than 10.0: 5780
Number of HSP's better than 10.0 without gapping: 42073
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44976
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 24283162270
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
