Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000177A_C01 KMC000177A_c01
(848 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM19353.1|AF369886_1 TIR-similar-domain-containing protein T... 116 4e-25
emb|CAA08798.1| NL27 [Solanum tuberosum] 113 4e-24
gb|AAG09951.1| resistance protein LM6 [Glycine max] 111 2e-23
gb|AAO23077.1| R 8 protein [Glycine max] 111 2e-23
emb|CAA08797.1| NL25 [Solanum tuberosum] 110 2e-23
>gb|AAM19353.1|AF369886_1 TIR-similar-domain-containing protein TSDC [Pisum sativum]
Length = 464
Score = 116 bits (291), Expect = 4e-25
Identities = 61/123 (49%), Positives = 82/123 (66%), Gaps = 1/123 (0%)
Frame = -2
Query: 802 LLGAIEESRVAIVVLSENFADSKWCLKELVKILDCRKKKKPLVLPIFYKVEPTNIRHLKG 623
LL IE SR++I+VLSEN+A+S CL ELVKIL+C+K KK LV PIFYKVEP++IR+++
Sbjct: 339 LLNVIEASRLSIIVLSENYANSTRCLDELVKILECKKLKKQLVWPIFYKVEPSDIRNMRK 398
Query: 622 RYGEAMAEHEKKLGKDSQTVREWTQALSDISYLKGEPYK-GTRDQFIEKIKSIVRSNRHR 446
YG+ MA HE G DS+ V++W AL ++ L G Y G +F +KI R R
Sbjct: 399 CYGKDMARHENIFGVDSERVQKWKSALGEVCNLSGMAYSIGFEYEFFQKIVEHANDIRSR 458
Query: 445 LHI 437
L +
Sbjct: 459 LQL 461
>emb|CAA08798.1| NL27 [Solanum tuberosum]
Length = 821
Score = 113 bits (282), Expect = 4e-24
Identities = 57/114 (50%), Positives = 79/114 (69%), Gaps = 4/114 (3%)
Frame = -2
Query: 847 FKDDLSLEDGAPI-EELLGAIEESRVAIVVLSENFADSKWCLKELVKILDCRKKKKPLVL 671
F+DD LE+G I EELL AIEES+VA+++ S+N+A S+WCL ELVKI++C+++K +V+
Sbjct: 51 FQDDKRLENGDSIPEELLKAIEESQVALIIFSKNYATSRWCLNELVKIMECKEEKGQIVI 110
Query: 670 PIFYKVEPTNIRHLKGRYGEAMAEHEKKLGKD---SQTVREWTQALSDISYLKG 518
PIFY V+P+ +R + EA EHE K D Q V+ W ALSD + LKG
Sbjct: 111 PIFYDVDPSEVRKQTKSFAEAFTEHESKYANDIEGMQKVKGWRTALSDAADLKG 164
>gb|AAG09951.1| resistance protein LM6 [Glycine max]
Length = 863
Score = 111 bits (277), Expect = 2e-23
Identities = 63/143 (44%), Positives = 90/143 (62%), Gaps = 6/143 (4%)
Frame = -2
Query: 847 FKDDLSLEDGAPIEELLG-AIEESRVAIVVLSENFADSKWCLKELVKILDCRKKKKPLVL 671
F DD L G I+ L AI+ESR+AI VLS+N+A S +CL ELV IL C K + LV+
Sbjct: 26 FIDDQELRRGDEIKPALSNAIQESRIAITVLSQNYASSSFCLDELVTILHC-KSQGLLVI 84
Query: 670 PIFYKVEPTNIRHLKGRYGEAMAEHEKKLGKDSQTVREWTQALSDISYLKGEPYKGTRDQ 491
P+FYKV+P+++RH KG YGEAMA+H+K+ + + +++W AL ++ L G +K
Sbjct: 85 PVFYKVDPSHVRHQKGSYGEAMAKHQKRFKANKEKLQKWRMALHQVADLSGYHFKDGDSY 144
Query: 490 FIEKIKSIV-----RSNRHRLHI 437
E I SIV + +R LH+
Sbjct: 145 EYEFIGSIVEEISRKFSRASLHV 167
>gb|AAO23077.1| R 8 protein [Glycine max]
Length = 892
Score = 111 bits (277), Expect = 2e-23
Identities = 63/143 (44%), Positives = 90/143 (62%), Gaps = 6/143 (4%)
Frame = -2
Query: 847 FKDDLSLEDGAPIEELLG-AIEESRVAIVVLSENFADSKWCLKELVKILDCRKKKKPLVL 671
F DD L G I+ L AI+ESR+AI VLS+N+A S +CL ELV IL C K + LV+
Sbjct: 43 FIDDQELRRGDEIKPALSNAIQESRIAITVLSQNYASSSFCLDELVTILHC-KSQGLLVI 101
Query: 670 PIFYKVEPTNIRHLKGRYGEAMAEHEKKLGKDSQTVREWTQALSDISYLKGEPYKGTRDQ 491
P+FYKV+P+++RH KG YGEAMA+H+K+ + + +++W AL ++ L G +K
Sbjct: 102 PVFYKVDPSHVRHQKGSYGEAMAKHQKRFKANKEKLQKWRMALHQVADLSGYHFKDGDSY 161
Query: 490 FIEKIKSIV-----RSNRHRLHI 437
E I SIV + +R LH+
Sbjct: 162 EYEFIGSIVEEISRKFSRASLHV 184
>emb|CAA08797.1| NL25 [Solanum tuberosum]
Length = 533
Score = 110 bits (276), Expect = 2e-23
Identities = 56/119 (47%), Positives = 81/119 (68%), Gaps = 4/119 (3%)
Frame = -2
Query: 847 FKDDLSLEDGAPI-EELLGAIEESRVAIVVLSENFADSKWCLKELVKILDCRKKKKPLVL 671
F+DD LE G I EELL AIEES+VA+V+ S+N+A S+WCL ELVKI++C++ KK +V+
Sbjct: 52 FQDDKRLEKGDSIPEELLKAIEESQVALVIFSKNYATSRWCLNELVKIMECKEVKKQIVM 111
Query: 670 PIFYKVEPTNIRHLKGRYGEAMAEHEKKLGKD---SQTVREWTQALSDISYLKGEPYKG 503
P+FY V+P+++RH G + EA ++H+ + D Q V+ W ALS + L G G
Sbjct: 112 PVFYDVDPSDVRHQTGSFAEAFSKHKSRYKDDVDGMQMVQGWRTALSAAADLSGTNVPG 170
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 762,841,285
Number of Sequences: 1393205
Number of extensions: 18256522
Number of successful extensions: 85422
Number of sequences better than 10.0: 534
Number of HSP's better than 10.0 without gapping: 68848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 81635
length of database: 448,689,247
effective HSP length: 122
effective length of database: 278,718,237
effective search space used: 44594917920
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
