Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000159A_C02 KMC000159A_c02
(601 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_014116.1| cell wall integrity and stress response compone... 45 7e-04
ref|NP_588138.1| hypothetical serine-rich protein [Schizosacchar... 45 0.001
sp|P40954|CHI3_CANAL CHITINASE 3 PRECURSOR gi|571429|gb|AAA68016... 44 0.002
ref|NP_596690.1| hypothetical serine-rich secreted protein [Schi... 44 0.002
pir||T45525 WSC4 homolog [imported] - yeast (Kluyveromyces marxi... 43 0.003
>ref|NP_014116.1| cell wall integrity and stress response component 2; Wsc2p
[Saccharomyces cerevisiae]
gi|1730647|sp|P53832|WSC2_YEAST Cell wall integrity and
stress response component 2 precursor
gi|2132783|pir||S63257 probable membrane protein YNL283c
- yeast (Saccharomyces cerevisiae)
gi|1302357|emb|CAA96195.1| ORF YNL283c [Saccharomyces
cerevisiae]
Length = 503
Score = 45.1 bits (105), Expect = 7e-04
Identities = 35/97 (36%), Positives = 51/97 (52%)
Frame = +1
Query: 241 HSLILYSTQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS*S 420
HS ST S TTSSS T SSS++SS S+ ST + T S+ S++SS + TSS +S S
Sbjct: 163 HSSSSSSTTSTTTSSSETTTSSSSSSSSSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSAS 222
Query: 421 ILIAPRRTIVTFNFLLTGFETTVVLLLSPSPAPPSDG 531
T T + + +T ++ +P+ S G
Sbjct: 223 SSSETSSTQATSSSTTSTSSSTSTATVTSTPSSTSIG 259
Score = 38.5 bits (88), Expect = 0.067
Identities = 25/47 (53%), Positives = 34/47 (72%)
Frame = +1
Query: 274 TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS 414
+TSSS+T + SSSTTS+ S S+ T T SS SS+SS T+T+S +S
Sbjct: 156 STSSSATHSSSSSSTTSTTTS--SSETTTSSSSSSSSSSTSTTSTTS 200
Score = 35.8 bits (81), Expect = 0.43
Identities = 21/47 (44%), Positives = 32/47 (67%)
Frame = +1
Query: 274 TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS 414
T++SSS + SSS+T+S +S S T + SS SS+SS + TS+ S+
Sbjct: 155 TSTSSSATHSSSSSSTTSTTTSSSETTTSSSSSSSSSSTSTTSTTST 201
Score = 35.0 bits (79), Expect = 0.74
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 6/58 (10%)
Frame = +1
Query: 259 STQS*TTSSS------STFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS 414
ST S T SS ST S +TTSS SS S++T T S+ S+ SS T+TSS S
Sbjct: 156 STSSSATHSSSSSSTTSTTTSSSETTTSSSSSSSSSSTSTTSTTSTTSSTTSTSSSPS 213
Score = 33.1 bits (74), Expect = 2.8
Identities = 31/107 (28%), Positives = 48/107 (43%)
Frame = +1
Query: 259 STQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS*SILIAPR 438
+T + TTSSSST +ST +S S++ SS SS +S T +SS+++ S +
Sbjct: 130 ATSTSTTSSSSTSVSSKTSTKLDTKTSTSSSATHSSSSSSTTSTTTSSSETTTSSSSSSS 189
Query: 439 RTIVTFNFLLTGFETTVVLLLSPSPAPPSDGFPSLXMSSMGSAIVSS 579
+ + + +T SPS S S +S A SS
Sbjct: 190 SSSTSTTSTTSTTSSTTSTSSSPSTTSSSTSASSSSETSSTQATSSS 236
>ref|NP_588138.1| hypothetical serine-rich protein [Schizosaccharomyces pombe]
gi|7492042|pir||T40941 hypothetical serine-rich protein
- fission yeast (Schizosaccharomyces pombe)
gi|4176550|emb|CAA22863.1| hypothetical serine-rich
protein [Schizosaccharomyces pombe]
Length = 262
Score = 44.7 bits (104), Expect = 0.001
Identities = 33/84 (39%), Positives = 53/84 (62%), Gaps = 6/84 (7%)
Frame = +1
Query: 253 LYSTQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDS-----S*SSASSFTATSSDSS* 417
+YS+ S +++SSST SSSTTSS SS S+ ++ S S S++SS +++S+ SS
Sbjct: 133 IYSSTSASSTSSSTATPSSSSTTSSSSSSSSSTPISSSITSSISSSASSSVSSSSASSSG 192
Query: 418 SILIAPRRTI-VTFNFLLTGFETT 486
SI A +T+ + N ++GF T+
Sbjct: 193 SISSADAKTVSASSNSTISGFSTS 216
>sp|P40954|CHI3_CANAL CHITINASE 3 PRECURSOR gi|571429|gb|AAA68016.1| chitinase
Length = 567
Score = 43.9 bits (102), Expect = 0.002
Identities = 35/110 (31%), Positives = 59/110 (52%), Gaps = 5/110 (4%)
Frame = +1
Query: 259 STQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS*SILIAPR 438
S+ S +++SSST + SSSTTSS +S+ STA + +S SS++ T+ S+ + S+ +
Sbjct: 366 SSTSSSSTSSSTSSTTSSSTTSSQISTTSTAPTSSTSLSSSTISTSASTSDTTSVTSSET 425
Query: 439 RTIVTFNFL-----LTGFETTVVLLLSPSPAPPSDGFPSLXMSSMGSAIV 573
+VT + L + G TT + S S P + +L S+ A +
Sbjct: 426 TPVVTPSSLSSAITIPGDSTTTGISKSSSTKPATSTTSALSSSTTTVATI 475
Score = 40.0 bits (92), Expect = 0.023
Identities = 36/106 (33%), Positives = 58/106 (53%), Gaps = 2/106 (1%)
Frame = +1
Query: 259 STQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFT-ATSSDSS*SILIAP 435
+T S ++SSS T ++STTSS +SS +++T + +S SS SS T +T+S S+ S I+
Sbjct: 333 TTISSSSSSSKTSKTSTTSTTSSSISSTTSSTTSSTSSSSTSSSTSSTTSSSTTSSQIST 392
Query: 436 RRTIVTFNFLLTGFE-TTVVLLLSPSPAPPSDGFPSLXMSSMGSAI 570
T T + L+ +T + S+ P + SS+ SAI
Sbjct: 393 TSTAPTSSTSLSSSTISTSASTSDTTSVTSSETTPVVTPSSLSSAI 438
Score = 34.3 bits (77), Expect = 1.3
Identities = 37/104 (35%), Positives = 52/104 (49%), Gaps = 2/104 (1%)
Frame = +1
Query: 274 TTSSSSTFNFWSSSTTSSVLSSCS--TATLTDSS*SSASSFTATSSDSS*SILIAPRRTI 447
TTSSS+T ++STT S SS S + T T S+ SS+ S T +S+ SS S T
Sbjct: 319 TTSSSTTTTTTTTSTTISSSSSSSKTSKTSTTSTTSSSISSTTSSTTSSTSSSSTSSSTS 378
Query: 448 VTFNFLLTGFETTVVLLLSPSPAPPSDGFPSLXMSSMGSAIVSS 579
T T TT + + S AP S SL S++ ++ +S
Sbjct: 379 ST-----TSSSTTSSQISTTSTAPTSS--TSLSSSTISTSASTS 415
Score = 33.9 bits (76), Expect = 1.6
Identities = 23/54 (42%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
Frame = +1
Query: 259 STQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFT--ATSSDSS 414
++ S TT++++T SSS++SS S ST + T SS SS +S T +TSS S+
Sbjct: 320 TSSSTTTTTTTTSTTISSSSSSSKTSKTSTTSTTSSSISSTTSSTTSSTSSSST 373
>ref|NP_596690.1| hypothetical serine-rich secreted protein [Schizosaccharomyces
pombe] gi|7493381|pir||T39903 serine-rich protein -
fission yeast (Schizosaccharomyces pombe)
gi|3873550|emb|CAA22127.1| hypothetical serine-rich
secreted protein [Schizosaccharomyces pombe]
Length = 534
Score = 43.5 bits (101), Expect = 0.002
Identities = 39/118 (33%), Positives = 64/118 (54%)
Frame = +1
Query: 244 SLILYSTQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS*SI 423
S ++ S+ S ++SSSST SS +TSS+ S+ S+++ T SS SS+SS + SS SS S
Sbjct: 213 SSVVSSSSSPSSSSSSTLTS-SSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSSSSS 271
Query: 424 LIAPRRTIVTFNFLLTGFETTVVLLLSPSPAPPSDGFPSLXMSSMGSAIVSSV*NAEM 597
+I+ + + T +T+ S S +P S SS S+ S++ ++ M
Sbjct: 272 IISSSSSSSSSP---TSTSSTISSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSM 326
Score = 42.4 bits (98), Expect = 0.005
Identities = 40/107 (37%), Positives = 56/107 (51%)
Frame = +1
Query: 259 STQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS*SILIAPR 438
S+ S TS+SST SS++SS S ST++ SS SS+SSF++T S SS S
Sbjct: 278 SSSSSPTSTSSTI----SSSSSSSSSPTSTSSTISSSSSSSSSFSSTLSSSSMS------ 327
Query: 439 RTIVTFNFLLTGFETTVVLLLSPSPAPPSDGFPSLXMSSMGSAIVSS 579
+ +F+ T +T+ S S +P S F S SS S+ SS
Sbjct: 328 -SSSSFSSSPTSSSSTI---SSSSSSPSSSSFSSTTSSSKSSSSFSS 370
Score = 36.2 bits (82), Expect = 0.33
Identities = 34/108 (31%), Positives = 55/108 (50%)
Frame = +1
Query: 256 YSTQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS*SILIAP 435
Y + S SSSS+ + SSST +S S S+ T SS SS SS ++SS SS + +
Sbjct: 209 YLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTASSSSS 268
Query: 436 RRTIVTFNFLLTGFETTVVLLLSPSPAPPSDGFPSLXMSSMGSAIVSS 579
+I++ + + T+ +S S + S P+ S++ S+ SS
Sbjct: 269 SSSIISSSSSSSSSPTSTSSTISSSSS--SSSSPTSTSSTISSSSSSS 314
Score = 36.2 bits (82), Expect = 0.33
Identities = 31/108 (28%), Positives = 60/108 (54%)
Frame = +1
Query: 256 YSTQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS*SILIAP 435
+S+ + T++SSS + S ++SS SS S++TLT SS S++S + +SS SS S ++
Sbjct: 197 FSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSS 256
Query: 436 RRTIVTFNFLLTGFETTVVLLLSPSPAPPSDGFPSLXMSSMGSAIVSS 579
+ T + + ++++ S S + P+ ++ SS S+ +S
Sbjct: 257 SSSSSTAS--SSSSSSSIISSSSSSSSSPTSTSSTISSSSSSSSSPTS 302
Score = 35.0 bits (79), Expect = 0.74
Identities = 28/52 (53%), Positives = 34/52 (64%)
Frame = +1
Query: 259 STQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS 414
ST S ++SS S+ +F SSTTSS SS S ++ SS SS SS T TSS SS
Sbjct: 341 STISSSSSSPSSSSF--SSTTSSSKSSSSFSSTVSSS-SSTSSSTLTSSSSS 389
Score = 35.0 bits (79), Expect = 0.74
Identities = 23/52 (44%), Positives = 33/52 (63%)
Frame = +1
Query: 259 STQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS 414
S S +++SSSTF+ + ++TSS S S+ + SS SS+SS T TSS S
Sbjct: 185 SQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLS 236
Score = 34.7 bits (78), Expect = 0.96
Identities = 25/61 (40%), Positives = 38/61 (61%), Gaps = 9/61 (14%)
Frame = +1
Query: 259 STQS*TTSSSSTF---------NFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDS 411
S S TSSSST + +SS+T+SS SS ++T++ SS +S+S+ T++SS S
Sbjct: 331 SFSSSPTSSSSTISSSSSSPSSSSFSSTTSSSKSSSSFSSTVSSSSSTSSSTLTSSSSSS 390
Query: 412 S 414
S
Sbjct: 391 S 391
Score = 33.9 bits (76), Expect = 1.6
Identities = 34/99 (34%), Positives = 51/99 (51%)
Frame = +1
Query: 283 SSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS*SILIAPRRTIVTFNF 462
+SSTF+ SSST+SS S ST++ T S S+A + T++S SS S++ + + +
Sbjct: 171 TSSTFSSLSSSTSSSQPSVSSTSSSTFS--SAAPTSTSSSYLSSSSVVSSSSSPSSSSSS 228
Query: 463 LLTGFETTVVLLLSPSPAPPSDGFPSLXMSSMGSAIVSS 579
LT LS S P + S SS+ S+ SS
Sbjct: 229 TLTSSS------LSTSSIPSTSSSSSSTSSSLSSSSSSS 261
Score = 31.6 bits (70), Expect = 8.2
Identities = 25/52 (48%), Positives = 34/52 (65%)
Frame = +1
Query: 259 STQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS 414
S S T+SS S+ +F SST SS SS S++TLT SS SS+ +++S SS
Sbjct: 354 SFSSTTSSSKSSSSF--SSTVSS-SSSTSSSTLTSSSSSSSRPASSSSHSSS 402
>pir||T45525 WSC4 homolog [imported] - yeast (Kluyveromyces marxianus var.
lactis) gi|5531272|emb|CAB50897.1| WSC4 homologue
[Kluyveromyces lactis]
Length = 446
Score = 43.1 bits (100), Expect = 0.003
Identities = 34/109 (31%), Positives = 62/109 (56%), Gaps = 1/109 (0%)
Frame = +1
Query: 259 STQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS*SILIAP- 435
S+ S ++SSSS+ + SSS++SS SS S+++ + SS SS+SS +++SS SS S +P
Sbjct: 159 SSSSSSSSSSSSSSSSSSSSSSSTSSSTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPT 218
Query: 436 RRTIVTFNFLLTGFETTVVLLLSPSPAPPSDGFPSLXMSSMGSAIVSSV 582
+T T ++ + + PS S+G S + + ++++V
Sbjct: 219 AQTTTTLEPSISVLYSVETITAEPSTDSNSNGSNSRTNEIVTTRVITTV 267
Score = 40.4 bits (93), Expect = 0.018
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = +1
Query: 259 STQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS 414
S S ++SSSS+ + SSS++SS SS ST++ T SS SS+SS +++SS SS
Sbjct: 153 SATSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSTSSSSSSSSSSSSSSSSSS 204
Score = 39.3 bits (90), Expect = 0.039
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 2/109 (1%)
Frame = +1
Query: 259 STQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS*SILIAPR 438
S+ S ++SSSS+ + SSS++SS +S ST++ + SS SS+SS +++SS SS S +
Sbjct: 157 SSSSSSSSSSSSSSSSSSSSSSSSSTSSSTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 216
Query: 439 RTIVTFNFLLTGFETTVVLLLSPS--PAPPSDGFPSLXMSSMGSAIVSS 579
T T T E ++ +L S A PS S +S + IV++
Sbjct: 217 PTAQT----TTTLEPSISVLYSVETITAEPSTDSNSNGSNSRTNEIVTT 261
Score = 38.5 bits (88), Expect = 0.067
Identities = 24/52 (46%), Positives = 39/52 (74%)
Frame = +1
Query: 259 STQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS 414
++ S ++SSSS+ + SSS++SS SS S++T + SS SS+SS +++SS SS
Sbjct: 155 TSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSTSSSSSSSSSSSSSSSSSSSS 206
Score = 38.1 bits (87), Expect = 0.087
Identities = 24/51 (47%), Positives = 38/51 (74%)
Frame = +1
Query: 262 TQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS 414
T S T+SSSS+ + SSS++SS SS S+++ + S+ SS+SS +++SS SS
Sbjct: 151 TGSATSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSTSSSSSSSSSSSSSSS 201
Score = 36.6 bits (83), Expect = 0.25
Identities = 23/52 (44%), Positives = 38/52 (72%)
Frame = +1
Query: 259 STQS*TTSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS 414
S+ S ++SSSS+ + SSS++SS S+ S+ + + SS SS+SS +++SS SS
Sbjct: 156 SSSSSSSSSSSSSSSSSSSSSSSSSSTSSSTSSSSSSSSSSSSSSSSSSSSS 207
Score = 35.0 bits (79), Expect = 0.74
Identities = 21/46 (45%), Positives = 34/46 (73%)
Frame = +1
Query: 277 TSSSSTFNFWSSSTTSSVLSSCSTATLTDSS*SSASSFTATSSDSS 414
+S+S T + SSS++SS SS S+++ + SS SS+S+ ++TSS SS
Sbjct: 146 SSTSDTGSATSSSSSSSSSSSSSSSSSSSSSSSSSSTSSSTSSSSS 191
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 493,669,027
Number of Sequences: 1393205
Number of extensions: 10141052
Number of successful extensions: 51831
Number of sequences better than 10.0: 465
Number of HSP's better than 10.0 without gapping: 36174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 46460
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 23426109484
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
