Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000148A_C01 KMC000148A_c01
(817 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK40361.1| CTR1-like protein kinase [Rosa hybrid cultivar] 223 3e-57
gb|AAL66190.1|AF386508_1 putative serine/threonine-specific prot... 209 5e-53
pir||T07406 probable protein kinase - tomato gi|2370253|emb|CAA7... 202 4e-51
ref|NP_195993.1| SERINE/THREONINE-PROTEIN KINASE CTR1; protein i... 202 5e-51
gb|AAD10056.1| ethylene-inducible CTR1-like protein kinase; ethy... 196 3e-49
>gb|AAK40361.1| CTR1-like protein kinase [Rosa hybrid cultivar]
Length = 847
Score = 223 bits (567), Expect = 3e-57
Identities = 103/121 (85%), Positives = 114/121 (94%)
Frame = -2
Query: 816 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGIILWELATLQQPWGNLNPAQVVAAVG 637
FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFG+ILWELATLQQPWGNLNPAQVVAAVG
Sbjct: 727 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG 786
Query: 636 FKGKRLEIPCDVNPQLAAMIEACWANEPWKRPSFSSIMDSLRTMLKPPTPQPGRPNMPLL 457
FK KRLEIP D+NPQ+A++IEACWANEPWKRPSF+SIM+SLR ++K PTPQP +MP+L
Sbjct: 787 FKNKRLEIPRDLNPQVASIIEACWANEPWKRPSFASIMESLRPLIKAPTPQPSHADMPIL 846
Query: 456 T 454
T
Sbjct: 847 T 847
>gb|AAL66190.1|AF386508_1 putative serine/threonine-specific protein kinase [Pyrus communis]
Length = 520
Score = 209 bits (531), Expect = 5e-53
Identities = 97/121 (80%), Positives = 107/121 (88%)
Frame = -2
Query: 816 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGIILWELATLQQPWGNLNPAQVVAAVG 637
F+SSKS AGTPEWMAPE LR EPSNEKSDVYSFG+ILWELAT+QQPWGNLNPAQVVAAVG
Sbjct: 400 FISSKSVAGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELATMQQPWGNLNPAQVVAAVG 459
Query: 636 FKGKRLEIPCDVNPQLAAMIEACWANEPWKRPSFSSIMDSLRTMLKPPTPQPGRPNMPLL 457
FK KRLEIP D+NP +AA+IEACWANEPWKRPSF+ IMDSL ++K P QP R +MPLL
Sbjct: 460 FKNKRLEIPRDLNPNVAAIIEACWANEPWKRPSFAVIMDSLTPLIKAPVTQPSRADMPLL 519
Query: 456 T 454
T
Sbjct: 520 T 520
>pir||T07406 probable protein kinase - tomato gi|2370253|emb|CAA73722.1| putative
protein kinase [Lycopersicon esculentum]
gi|5669642|gb|AAD46406.1|AF096250_1 ethylene-responsive
protein kinase TCTR1 [Lycopersicon esculentum]
gi|19547869|gb|AAL87456.1| ethylene-responsive protein
kinase Le-CTR1 [Lycopersicon esculentum]
Length = 829
Score = 202 bits (515), Expect = 4e-51
Identities = 94/121 (77%), Positives = 105/121 (86%)
Frame = -2
Query: 816 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGIILWELATLQQPWGNLNPAQVVAAVG 637
FLSSK+AAGTPEWMAPEV+RDEPSNEKSDVYSFG+ILWELATLQQPW LNP QV+AAVG
Sbjct: 709 FLSSKTAAGTPEWMAPEVIRDEPSNEKSDVYSFGVILWELATLQQPWNKLNPPQVIAAVG 768
Query: 636 FKGKRLEIPCDVNPQLAAMIEACWANEPWKRPSFSSIMDSLRTMLKPPTPQPGRPNMPLL 457
F KRL+IP D+NPQ+A +IEACWANEPWKRPSFS+IMD LR LK P P PG +M LL
Sbjct: 769 FNRKRLDIPSDLNPQVAIIIEACWANEPWKRPSFSTIMDMLRPHLKSPLPPPGHTDMQLL 828
Query: 456 T 454
+
Sbjct: 829 S 829
>ref|NP_195993.1| SERINE/THREONINE-PROTEIN KINASE CTR1; protein id: At5g03730.1,
supported by cDNA: gi_166679 [Arabidopsis thaliana]
gi|1169128|sp|Q05609|CTR1_ARATH Serine/threonine-protein
kinase CTR1 gi|11346407|pir||T48400
serine/threonine-protein kinase ctr1 - Arabidopsis
thaliana gi|166680|gb|AAA32779.1| protein kinase
gi|166682|gb|AAA32780.1| protein kinase
gi|7340658|emb|CAB82938.1| SERINE/THREONINE-PROTEIN
KINASE CTR1 [Arabidopsis thaliana]
Length = 821
Score = 202 bits (514), Expect = 5e-51
Identities = 94/117 (80%), Positives = 105/117 (89%)
Frame = -2
Query: 816 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGIILWELATLQQPWGNLNPAQVVAAVG 637
FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFG+ILWELATLQQPWGNLNPAQVVAAVG
Sbjct: 705 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG 764
Query: 636 FKGKRLEIPCDVNPQLAAMIEACWANEPWKRPSFSSIMDSLRTMLKPPTPQPGRPNM 466
FK KRLEIP ++NPQ+AA+IE CW NEPWKRPSF++IMD LR ++K P P R ++
Sbjct: 765 FKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNRSDL 821
>gb|AAD10056.1| ethylene-inducible CTR1-like protein kinase; ethylene and fruit
ripening inducible CTR1-like protein kinase; TCTR1
[Lycopersicon esculentum]
Length = 829
Score = 196 bits (499), Expect = 3e-49
Identities = 91/121 (75%), Positives = 104/121 (85%)
Frame = -2
Query: 816 FLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGIILWELATLQQPWGNLNPAQVVAAVG 637
FLSSK+AAGTPEWMAPEV+RDEPSNEKSDVYSFG+ILWELATLQQPW LNP QV+AAVG
Sbjct: 709 FLSSKTAAGTPEWMAPEVIRDEPSNEKSDVYSFGVILWELATLQQPWNKLNPPQVIAAVG 768
Query: 636 FKGKRLEIPCDVNPQLAAMIEACWANEPWKRPSFSSIMDSLRTMLKPPTPQPGRPNMPLL 457
F K+L+IP +NP++A +IEACWANEPWKRPSFS+IMD LR LK P P PG +M LL
Sbjct: 769 FNRKKLDIPSVLNPRVAIIIEACWANEPWKRPSFSTIMDMLRPHLKSPLPPPGHTDMQLL 828
Query: 456 T 454
+
Sbjct: 829 S 829
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 752,725,460
Number of Sequences: 1393205
Number of extensions: 17979320
Number of successful extensions: 52784
Number of sequences better than 10.0: 6212
Number of HSP's better than 10.0 without gapping: 47786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 50444
length of database: 448,689,247
effective HSP length: 121
effective length of database: 280,111,442
effective search space used: 42016716300
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
