>KMC000143A_C01 KMC000143A_c01
gcagattgaaaaagagatatggaataatggaagtGGTGCAGAAATAGCTAAAATGGTATC
ATCAAAGTAAATGTCACTTTGTCCAACTACAGCAGATGCTTGCACATTGTAACTAGACAA
AGCACCCCTATGCACAAATTTAAACGAATATACTGCAGTGGACTTGAGTGACAGGAGAGA
GATGTAACCACTAACCAGTAAAGGAAAAGAGTGAAAGAAAACTATAATAGTAAAAAAAAT
GTCATAAATAATTTTTTCCGCCTTGGACTTGCTATTTGGCTAAAGTTACCTTGGACCAGA
TAACTCAACTGCATGAAGATTTTCAGTTGAGTCAACTATCCAATCAGAATGGGGATGTGG
GGCTAGCTCCATCTCCTGGCGGAGAATTTCCACCTTTnGnCACTCATCCCATCTTTCTGn
CAAGCCATCACCTTCAAGCATACGCACCACCTCTGACATTTTAGGCCGGTCCATAGGGGA
AC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC000143A_C01 KMC000143A_c01
         (482 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAN64293.1| somatic embryogenesis receptor kinase 1 [Medicago...   120  1e-26
gb|AAK68073.1|AF384969_1 somatic embryogenesis receptor-like kin...   112  2e-24
ref|NP_174683.1| somatic embryogenesis receptor-like kinase, put...   112  2e-24
pir||H96740 hypothetical protein F14O23.21 [imported] - Arabidop...   111  4e-24
gb|AAK82463.1| At1g71830/F14O23_24 [Arabidopsis thaliana] gi|250...   111  4e-24

>gb|AAN64293.1| somatic embryogenesis receptor kinase 1 [Medicago truncatula]
           gi|24935326|gb|AAN64294.1| somatic embryogenesis
           receptor kinase 1 [Medicago truncatula]
          Length = 627

 Score =  120 bits (300), Expect = 1e-26
 Identities = 56/64 (87%), Positives = 60/64 (93%)
 Frame = -3

Query: 480 SPMDRPKMSEVVRMLEGDGLXERWDEXXKVEILRQEMELAPHPHSDWIVDSTENLHAVEL 301
           SPMDRPKMS+VVRMLEGDGL ERWDE  K E+LRQE+ELAPHP+SDWIVDSTENLHAVEL
Sbjct: 564 SPMDRPKMSDVVRMLEGDGLAERWDEWQKGEVLRQEVELAPHPNSDWIVDSTENLHAVEL 623

Query: 300 SGPR 289
           SGPR
Sbjct: 624 SGPR 627

>gb|AAK68073.1|AF384969_1 somatic embryogenesis receptor-like kinase 2 [Arabidopsis thaliana]
          Length = 628

 Score =  112 bits (280), Expect = 2e-24
 Identities = 51/64 (79%), Positives = 59/64 (91%)
 Frame = -3

Query: 480 SPMDRPKMSEVVRMLEGDGLXERWDEXXKVEILRQEMELAPHPHSDWIVDSTENLHAVEL 301
           SPM+RPKMSEVVRMLEGDGL E+WDE  KVE+LRQE+EL+ HP SDWI+DST+NLHA+EL
Sbjct: 565 SPMERPKMSEVVRMLEGDGLAEKWDEWQKVEVLRQEVELSSHPTSDWILDSTDNLHAMEL 624

Query: 300 SGPR 289
           SGPR
Sbjct: 625 SGPR 628

>ref|NP_174683.1| somatic embryogenesis receptor-like kinase, putative; protein id:
           At1g34210.1, supported by cDNA: gi_14573456 [Arabidopsis
           thaliana] gi|25513557|pir||D86466 69.4K hypothetical
           protein F23M19.11 - Arabidopsis thaliana
           gi|5091623|gb|AAD39611.1|AC007454_10 Similar to
           gb|U93048 somatic embryogenesis receptor-like kinase
           from Daucus carota, contains 4 PF|00560 Leucine Rich
           Repeat domains and a PF|00069 Eukaryotic protein kinase
           domain. [Arabidopsis thaliana]
          Length = 628

 Score =  112 bits (280), Expect = 2e-24
 Identities = 51/64 (79%), Positives = 59/64 (91%)
 Frame = -3

Query: 480 SPMDRPKMSEVVRMLEGDGLXERWDEXXKVEILRQEMELAPHPHSDWIVDSTENLHAVEL 301
           SPM+RPKMSEVVRMLEGDGL E+WDE  KVE+LRQE+EL+ HP SDWI+DST+NLHA+EL
Sbjct: 565 SPMERPKMSEVVRMLEGDGLAEKWDEWQKVEVLRQEVELSSHPTSDWILDSTDNLHAMEL 624

Query: 300 SGPR 289
           SGPR
Sbjct: 625 SGPR 628

>pir||H96740 hypothetical protein F14O23.21 [imported] - Arabidopsis thaliana
           gi|7239510|gb|AAF43236.1|AC012654_20 Contains similarity
           to the somatic embryogenesis receptor-like kinase from
           Daucus carota gb|AC007454; It contains 3 leucine rich
           repeat domains PF|00560 and a eukaryotic protein kinase
           domain PF|00069. [Arabidopsis thaliana]
          Length = 601

 Score =  111 bits (278), Expect = 4e-24
 Identities = 51/64 (79%), Positives = 60/64 (93%)
 Frame = -3

Query: 480 SPMDRPKMSEVVRMLEGDGLXERWDEXXKVEILRQEMELAPHPHSDWIVDSTENLHAVEL 301
           SPM+RPKMSEVVRMLEGDGL E+WDE  KVEILR+E++L+P+P+SDWI+DST NLHAVEL
Sbjct: 538 SPMERPKMSEVVRMLEGDGLAEKWDEWQKVEILREEIDLSPNPNSDWILDSTYNLHAVEL 597

Query: 300 SGPR 289
           SGPR
Sbjct: 598 SGPR 601

>gb|AAK82463.1| At1g71830/F14O23_24 [Arabidopsis thaliana]
           gi|25090706|gb|AAN72307.1| At1g71830/F14O23_24
           [Arabidopsis thaliana]
          Length = 625

 Score =  111 bits (278), Expect = 4e-24
 Identities = 51/64 (79%), Positives = 60/64 (93%)
 Frame = -3

Query: 480 SPMDRPKMSEVVRMLEGDGLXERWDEXXKVEILRQEMELAPHPHSDWIVDSTENLHAVEL 301
           SPM+RPKMSEVVRMLEGDGL E+WDE  KVEILR+E++L+P+P+SDWI+DST NLHAVEL
Sbjct: 562 SPMERPKMSEVVRMLEGDGLAEKWDEWQKVEILREEIDLSPNPNSDWILDSTYNLHAVEL 621

Query: 300 SGPR 289
           SGPR
Sbjct: 622 SGPR 625

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 416,812,722
Number of Sequences: 1393205
Number of extensions: 8442881
Number of successful extensions: 21996
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 21347
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21969
length of database: 448,689,247
effective HSP length: 113
effective length of database: 291,257,082
effective search space used: 13689082854
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 MRL039e09_f BP085638 1 366 2 SPD054e02_f BP048310 22 345 3 MFB099g01_f BP041212 38 115 4 GENLf005e04 BP062617 39 482

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