>KMC000114A_C01 KMC000114A_c01
gagatgagaagatAGAAGTAAATTACCATGTCCTTTAAGGAAATGTCAGGAAGTTTCAAT
TTTCAATACAATATCTAAACTCTTGAAGCCTGCAATTCACAAAATTAATAGCAGCATTAA
TCATACATCTAACACCTAGCGCCCTTCTCTACTCTACAGTATCGATGACCTATACATCAC
TGACATAAATCTACTTTATGAAATCAGATACATATAGGGGGAAAAAATCAAATTCAAGGT
CAAGAACCTTTAGCCCAGAAAAGGACTTGGGTGGAAACAGTTAATTCTTTCAAAGAAAAC
TGAAATGGCCATAATCGAGGATGCTTCACCCAAAATTCAGCATGACGGTGAGCGGCTATG
AATATAAATTCAGTAAGAGAGGCCTCAAAGATGAAACAATCTTCAAAGTCAATGAATGAA
AAGTCCCCATCTAAGTTGATTCCCCAAGGGTGGATAAGCTAAGTTCATGTCTTTGATCTC
TTTGGCTTATGAGGAACAAAACGAACCCCCTGCTTTTTGAGATCGCAGATATCCACCCTA
CCTTCATCTAAGGTAACATGCAACTTTGAAGTGCCTTCAACTACTTCAGTAAC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KMC000114A_C01 KMC000114A_c01
         (593 letters)

Database: nr 
           1,393,205 sequences; 448,689,247 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_190778.1| putative protein; protein id: At3g52100.1 [Arab...    49  6e-05
ref|NP_187459.1| unknown protein; protein id: At3g08020.1 [Arabi...    42  0.006
gb|EAA16269.1| hypothetical protein [Plasmodium yoelii yoelii]         34  1.6

>ref|NP_190778.1| putative protein; protein id: At3g52100.1 [Arabidopsis thaliana]
           gi|11289967|pir||T49089 hypothetical protein F4F15.210 -
           Arabidopsis thaliana gi|4678939|emb|CAB41330.1| putative
           protein [Arabidopsis thaliana]
          Length = 763

 Score = 48.5 bits (114), Expect = 6e-05
 Identities = 23/36 (63%), Positives = 28/36 (76%)
 Frame = -1

Query: 575 GTSKLHVTLDEGRVDICDLKKQGVRFVPHKPKRSKT 468
           GTSKL VTL+ G+V   +L KQGVRFVP K KR++T
Sbjct: 654 GTSKLMVTLENGKVKTVELGKQGVRFVPQKQKRTRT 689

>ref|NP_187459.1| unknown protein; protein id: At3g08020.1 [Arabidopsis thaliana]
           gi|6648214|gb|AAF21212.1|AC013483_36 unknown protein
           [Arabidopsis thaliana]
          Length = 764

 Score = 42.0 bits (97), Expect = 0.006
 Identities = 20/42 (47%), Positives = 28/42 (66%)
 Frame = -1

Query: 593 VTEVVEGTSKLHVTLDEGRVDICDLKKQGVRFVPHKPKRSKT 468
           VT+V   TS L V+LD+G +   +L K  VRF+P K KRS++
Sbjct: 723 VTDVSGDTSTLSVSLDDGSIKTFELGKHSVRFIPQKQKRSRS 764

>gb|EAA16269.1| hypothetical protein [Plasmodium yoelii yoelii]
          Length = 294

 Score = 33.9 bits (76), Expect = 1.6
 Identities = 30/102 (29%), Positives = 40/102 (38%), Gaps = 4/102 (3%)
 Frame = +2

Query: 65  NTISKLLKPAIHKINSSINHTSNT*RPSLLYSIDDLYITD----INLLYEIRYI*GEKIK 232
           N I KL+   I K N   ++         +Y +  LY  D    I L Y    I   KI+
Sbjct: 10  NNIDKLINDKIKKENIFESNFVKLNNNFSIYKLSYLYFNDKLKRIRLDYNFHLILSNKIR 69

Query: 233 FKVKNL*PRKGLGWKQLILSKKTEMAIIEDASPKIQHDGERL 358
           +K +N         K L    K  M+I+ED      H  ERL
Sbjct: 70  YKKQNK--------KNLEKKNKQNMSILEDTEQNFFHIYERL 103

  Database: nr
    Posted date:  Apr 1, 2003  2:05 AM
  Number of letters in database: 448,689,247
  Number of sequences in database:  1,393,205
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 448,718,012
Number of Sequences: 1393205
Number of extensions: 8575505
Number of successful extensions: 15929
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 15682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15928
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 22854740960
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

EST assemble image

clone accession position 1 GENLf072g02 BP066262 1 500 2 GENLf069b09 BP066059 14 555 3 MPDL087b06_f AV781032 14 584 4 MWM166f10_f AV767306 14 595 5 MRL026a01_f BP085028 19 387 6 GENLf085h07 BP067000 31 470

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