Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000112A_C03 KMC000112A_c03
(555 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||D85436 MAP3K-like protein kinase [imported] - Arabidopsis t... 142 4e-33
ref|NP_564553.1| expressed protein; protein id: At1g49740.1, sup... 141 6e-33
gb|AAO22804.1| unknown protein [Arabidopsis thaliana] 132 4e-30
ref|NP_188562.1| unknown protein; protein id: At3g19310.1 [Arabi... 132 4e-30
emb|CAD41004.1| OSJNBa0042L16.2 [Oryza sativa (japonica cultivar... 127 7e-29
>pir||D85436 MAP3K-like protein kinase [imported] - Arabidopsis thaliana
gi|4006878|emb|CAB16796.1| MAP3K-like protein kinase
[Arabidopsis thaliana] gi|7270644|emb|CAB80361.1|
MAP3K-like protein kinase [Arabidopsis thaliana]
Length = 799
Score = 142 bits (357), Expect = 4e-33
Identities = 67/112 (59%), Positives = 82/112 (72%)
Frame = -1
Query: 549 REASEGIAYEWNYVVESQFGNVGIKGGSCQNRPESLPMNNATKSLVLMNYFRNVRNHDDE 370
+EASEG+AY+WNY+VE+Q+GN G+K GSC +R ES ++ ++SLV NYF N +
Sbjct: 542 KEASEGLAYQWNYMVENQYGNDGMKDGSCSSRSESSSLDTMSRSLVFQNYFETSPN-STQ 600
Query: 369 ACRDNSSPLIAMMHVCFRAAGNRWPNFIAVDFYKRGDGGGAPEALDLANRNL 214
AC DNSSPLI MM C AAG RWPNFIAVDFY+R D GGA EA+D AN L
Sbjct: 601 ACADNSSPLIEMMRTCHEAAGKRWPNFIAVDFYQRSDSGGAAEAVDEANGRL 652
>ref|NP_564553.1| expressed protein; protein id: At1g49740.1, supported by cDNA:
17743., supported by cDNA: gi_20260217 [Arabidopsis
thaliana] gi|25372963|pir||A96534 hypothetical protein
F14J22.5 [imported] - Arabidopsis thaliana
gi|10120435|gb|AAG13060.1|AC011807_19 Unknown protein
[Arabidopsis thaliana] gi|20260218|gb|AAM13007.1|
unknown protein [Arabidopsis thaliana]
gi|21387023|gb|AAM47915.1| unknown protein [Arabidopsis
thaliana]
Length = 359
Score = 141 bits (355), Expect = 6e-33
Identities = 65/113 (57%), Positives = 89/113 (78%)
Frame = -1
Query: 549 REASEGIAYEWNYVVESQFGNVGIKGGSCQNRPESLPMNNATKSLVLMNYFRNVRNHDDE 370
+EA+EGIAY+W Y+VE+Q+GN G+K G C NR +S PM++ +KSLVL+N+F + +
Sbjct: 232 KEATEGIAYQWKYMVENQYGNGGLKVGVCPNRAQSAPMSDKSKSLVLVNHFPDAADVI-V 290
Query: 369 ACRDNSSPLIAMMHVCFRAAGNRWPNFIAVDFYKRGDGGGAPEALDLANRNLI 211
AC+ NS+ L+ + C++AAG RWPNFIAVDFYKR DGGGAP+A+D+AN NLI
Sbjct: 291 ACKQNSASLLESIKTCYQAAGQRWPNFIAVDFYKRSDGGGAPQAVDVANGNLI 343
>gb|AAO22804.1| unknown protein [Arabidopsis thaliana]
Length = 397
Score = 132 bits (331), Expect = 4e-30
Identities = 59/113 (52%), Positives = 86/113 (75%)
Frame = -1
Query: 549 REASEGIAYEWNYVVESQFGNVGIKGGSCQNRPESLPMNNATKSLVLMNYFRNVRNHDDE 370
+EASEGIA+ W Y++E+Q+G+ G+K G C NRPES+ M + ++SL+L+NYF + +
Sbjct: 216 KEASEGIAFMWRYMIENQYGDGGMKAGVCTNRPESVAMGDRSRSLILVNYFPDTADVIG- 274
Query: 369 ACRDNSSPLIAMMHVCFRAAGNRWPNFIAVDFYKRGDGGGAPEALDLANRNLI 211
+C+ NS+PL+ + C A+G RWPNFIAVDFYKR DGGGAP+A+D+AN + +
Sbjct: 275 SCKQNSAPLLDTVKNCQEASGKRWPNFIAVDFYKRSDGGGAPKAVDVANGHAV 327
>ref|NP_188562.1| unknown protein; protein id: At3g19310.1 [Arabidopsis thaliana]
gi|11994453|dbj|BAB02455.1| MAP3K protein kinase-like
protein [Arabidopsis thaliana]
Length = 413
Score = 132 bits (331), Expect = 4e-30
Identities = 59/113 (52%), Positives = 86/113 (75%)
Frame = -1
Query: 549 REASEGIAYEWNYVVESQFGNVGIKGGSCQNRPESLPMNNATKSLVLMNYFRNVRNHDDE 370
+EASEGIA+ W Y++E+Q+G+ G+K G C NRPES+ M + ++SL+L+NYF + +
Sbjct: 232 KEASEGIAFMWRYMIENQYGDGGMKAGVCTNRPESVAMGDRSRSLILVNYFPDTADVIG- 290
Query: 369 ACRDNSSPLIAMMHVCFRAAGNRWPNFIAVDFYKRGDGGGAPEALDLANRNLI 211
+C+ NS+PL+ + C A+G RWPNFIAVDFYKR DGGGAP+A+D+AN + +
Sbjct: 291 SCKQNSAPLLDTVKNCQEASGKRWPNFIAVDFYKRSDGGGAPKAVDVANGHAV 343
>emb|CAD41004.1| OSJNBa0042L16.2 [Oryza sativa (japonica cultivar-group)]
Length = 402
Score = 127 bits (320), Expect = 7e-29
Identities = 62/114 (54%), Positives = 82/114 (71%)
Frame = -1
Query: 555 ASREASEGIAYEWNYVVESQFGNVGIKGGSCQNRPESLPMNNATKSLVLMNYFRNVRNHD 376
+++EA+EGI YEW+YVVE+Q+G G+ G C NR ES MN+ ++SLVL+NYFR++ N
Sbjct: 235 SAKEAAEGIPYEWHYVVENQYGTKGMIKGRCPNRAESAAMNDLSRSLVLVNYFRDLPNF- 293
Query: 375 DEACRDNSSPLIAMMHVCFRAAGNRWPNFIAVDFYKRGDGGGAPEALDLANRNL 214
AC+DNS+ L+ M+ C + +RW NFIAVDFYKR D GGA EA D AN L
Sbjct: 294 PVACKDNSAELLDMLTTCHDLSADRWANFIAVDFYKRSDRGGAAEATDRANGGL 347
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 455,617,990
Number of Sequences: 1393205
Number of extensions: 9053034
Number of successful extensions: 21066
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 20579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21047
length of database: 448,689,247
effective HSP length: 116
effective length of database: 287,077,467
effective search space used: 19521267756
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
