Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KMC000106A_C01 KMC000106A_c01
(581 letters)
Database: nr
1,393,205 sequences; 448,689,247 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||B96538 hypothetical protein F14I3.19 [imported] - Arabidops... 127 1e-28
ref|NP_175437.1| disease resistance protein (CC-NBS-LRR class), ... 127 1e-28
ref|NP_176187.1| disease resistance protein (CC-NBS-LRR class), ... 97 1e-19
ref|NP_175742.1| disease resistance protein (CC-NBS-LRR class), ... 96 4e-19
ref|NP_190255.1| disease resistance protein (CC-NBS-LRR class), ... 94 2e-18
>pir||B96538 hypothetical protein F14I3.19 [imported] - Arabidopsis thaliana
gi|5734781|gb|AAD50046.1|AC007980_11 Very similar to
disease resistance proteins [Arabidopsis thaliana]
Length = 839
Score = 127 bits (319), Expect = 1e-28
Identities = 65/169 (38%), Positives = 105/169 (61%), Gaps = 8/169 (4%)
Frame = +1
Query: 94 MVDSVVNFAVERLGDLLIEEARLLHGVSDQVKKLQTELKRMQCFLRDAERRQDEDETIKN 273
M +++V+ V++LG LL+EE L G+ DQVK+LQ ELKR+ CFL+DA+ +Q E E ++N
Sbjct: 1 MAEAIVSVTVQKLGQLLLEEPLFLFGIGDQVKQLQDELKRLNCFLKDADEKQHESERVRN 60
Query: 274 WISEIRQLAYDAEDVIEIYATKVAGGLSFGAKNP-------FSKGKHLHKVGTEIVSINS 432
W++ IR+ +YDAED++E + K G K ++ LH VG+EI I S
Sbjct: 61 WVAGIREASYDAEDILEAFFLKAESRKQKGMKRVLRRLACILNEAVSLHSVGSEIREITS 120
Query: 433 RISDLTRSLQTYGLTATRDNEERAL-EAKRELRWSYSHIVEEFVVGLDE 576
R+S + S+ +G+ + E +L ++ RE R S+ ++VE +VGL++
Sbjct: 121 RLSKIAASMLDFGIKESMGREGLSLSDSLREQRQSFPYVVEHNLVGLEQ 169
>ref|NP_175437.1| disease resistance protein (CC-NBS-LRR class), putative; protein
id: At1g50180.1 [Arabidopsis thaliana]
Length = 857
Score = 127 bits (319), Expect = 1e-28
Identities = 65/169 (38%), Positives = 105/169 (61%), Gaps = 8/169 (4%)
Frame = +1
Query: 94 MVDSVVNFAVERLGDLLIEEARLLHGVSDQVKKLQTELKRMQCFLRDAERRQDEDETIKN 273
M +++V+ V++LG LL+EE L G+ DQVK+LQ ELKR+ CFL+DA+ +Q E E ++N
Sbjct: 1 MAEAIVSVTVQKLGQLLLEEPLFLFGIGDQVKQLQDELKRLNCFLKDADEKQHESERVRN 60
Query: 274 WISEIRQLAYDAEDVIEIYATKVAGGLSFGAKNP-------FSKGKHLHKVGTEIVSINS 432
W++ IR+ +YDAED++E + K G K ++ LH VG+EI I S
Sbjct: 61 WVAGIREASYDAEDILEAFFLKAESRKQKGMKRVLRRLACILNEAVSLHSVGSEIREITS 120
Query: 433 RISDLTRSLQTYGLTATRDNEERAL-EAKRELRWSYSHIVEEFVVGLDE 576
R+S + S+ +G+ + E +L ++ RE R S+ ++VE +VGL++
Sbjct: 121 RLSKIAASMLDFGIKESMGREGLSLSDSLREQRQSFPYVVEHNLVGLEQ 169
>ref|NP_176187.1| disease resistance protein (CC-NBS-LRR class), putative; protein
id: At1g59780.1 [Arabidopsis thaliana]
gi|25404228|pir||G96621 probable disease resistance
protein F23H11.10 [imported] - Arabidopsis thaliana
gi|5080812|gb|AAD39321.1|AC007258_10 Putative disease
resistance protein [Arabidopsis thaliana]
Length = 906
Score = 97.4 bits (241), Expect = 1e-19
Identities = 57/167 (34%), Positives = 98/167 (58%), Gaps = 3/167 (1%)
Frame = +1
Query: 88 IIMVDSVVNFAVERLGDLLIEEARLLHGVSDQVKKLQTELKRMQCFLRDAERRQDEDETI 267
+ MVDS+V+F VE+L LL +E GV +Q+ +L+ +LK + FL DA+ ++
Sbjct: 4 LYMVDSIVSFGVEKLWKLLSQEYERFQGVEEQITELRDDLKMLMAFLSDADAKKQTRALA 63
Query: 268 KNWISEIRQLAYDAEDVIEIYATKVAGGLSFGAKNPFSKGKHLHKVGTEIVSINSRISDL 447
+N + EI+++ YDAED+IEI+ K G ++ + F G+ ++ +I SI+ RIS +
Sbjct: 64 RNCLEEIKEITYDAEDIIEIFLLK--GSVNMRSLACFPGGR--REIALQITSISKRISKV 119
Query: 448 TRSLQTYGLTA---TRDNEERALEAKRELRWSYSHIVEEFVVGLDED 579
+ +Q G+ + + LE KRELR ++S E +VGL+++
Sbjct: 120 IQVMQNLGIKSDIMDGVDSHAQLERKRELRHTFSSESESNLVGLEKN 166
>ref|NP_175742.1| disease resistance protein (CC-NBS-LRR class), putative; protein
id: At1g53350.1 [Arabidopsis thaliana]
Length = 906
Score = 95.5 bits (236), Expect = 4e-19
Identities = 54/168 (32%), Positives = 96/168 (57%), Gaps = 7/168 (4%)
Frame = +1
Query: 94 MVDSVVNFAVERLGDLLIEEARLLHGVSDQVKKLQTELKRMQCFLRDAERRQDEDETIKN 273
M ++VV+F VE+L +LL E+ L+G+ +QV L+ +L R+Q L+DA+ +++E E ++N
Sbjct: 1 MAEAVVSFGVEKLWELLSRESARLNGIDEQVDGLKRQLGRLQSLLKDADAKKNETERVRN 60
Query: 274 WISEIRQLAYDAEDVIEIYATKVAGGLSFGAKNPFSKGK----HLHKVGTEIVSINSRIS 441
++ +++ + YDA+D+IE + G G K K ++I I RIS
Sbjct: 61 FLEDVKDIVYDADDIIESFLLNELRGKEKGIKKQVRTLACFLVDRRKFASDIEGITKRIS 120
Query: 442 DLTRSLQTYGLTATRDNEERAL---EAKRELRWSYSHIVEEFVVGLDE 576
++ +Q+ G+ D R+L E +RE+R ++S E +VGLD+
Sbjct: 121 EVIVGMQSLGIQHIADGGGRSLSLQERQREIRQTFSRNSESDLVGLDQ 168
>ref|NP_190255.1| disease resistance protein (CC-NBS-LRR class), putative; protein
id: At3g46710.1 [Arabidopsis thaliana]
gi|7443913|pir||T12979 hypothetical protein T6H20.260 -
Arabidopsis thaliana gi|5541688|emb|CAB51194.1| putative
protein [Arabidopsis thaliana]
Length = 847
Score = 93.6 bits (231), Expect = 2e-18
Identities = 60/169 (35%), Positives = 92/169 (53%), Gaps = 7/169 (4%)
Frame = +1
Query: 94 MVDSVVNFAVERLGDLLIEEARLLHGVSDQVKKLQTELKRMQCFLRDAERRQDEDETIKN 273
MVD++ F V ++ + LIEEA +L GV D +++L+TEL +Q +L++ E EDE K
Sbjct: 1 MVDAITEFVVGKIDNYLIEEAPMLIGVKDDLEELKTELTCIQVYLKNVEVCDKEDEVSKE 60
Query: 274 WISEIRQLAYDAEDVIEIYATKVAGGLS----FGAKNPFSKGKHLHKVGTEIVSINSRIS 441
W + +AYD EDV++ Y K+ L N S K + + +I ++ R
Sbjct: 61 WTKLVLDIAYDVEDVLDTYFLKLEKRLHRLGLMRLTNIISDKKDAYNILDDIKTLKRRTL 120
Query: 442 DLTRSLQTYGLTATRDNEERALEAK---RELRWSYSHIVEEFVVGLDED 579
D+TR L+ YG+ NE R + + RE+R + S EE VVGL +D
Sbjct: 121 DVTRKLEMYGI--GNFNEHRVVASTSRVREVRRARSDDQEERVVGLTDD 167
Database: nr
Posted date: Apr 1, 2003 2:05 AM
Number of letters in database: 448,689,247
Number of sequences in database: 1,393,205
Lambda K H
0.316 0.134 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 449,095,863
Number of Sequences: 1393205
Number of extensions: 8572349
Number of successful extensions: 27206
Number of sequences better than 10.0: 212
Number of HSP's better than 10.0 without gapping: 25843
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27018
length of database: 448,689,247
effective HSP length: 117
effective length of database: 285,684,262
effective search space used: 21712003912
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
