>KCC010204A_C01 KCC010204A_c01
gtcaCTCAGTTACTCTCACCAGCAAAGATGGCCTTCGCTCTGGCTGTCCCGCAATGGCTC
CTGCAGTGTCACCGTGCAATGGCTGACCTGTGCAAGAATGACCTGCTTGCCAATGTGCTG
CCTGGCCCCCCAAGAATGCTCCTGTGCTGTTGATGTTTTCTATTGTGCCCCAACCTGCTG
CCCCAATGTGTGCTTGGGCCCCCTACTCGTGAGAACTGCGACCCCCGCTGTACCGTGACT
TGGCTGAGTTCCCCGTGCTGACTACTGTGCTTGGGACACCTGCCTGGCCCTGTCCTGCGT
GACCCTGTGATGACCTTCAATGCTGCGTACCTGCAGATGCCTTGGATGCCTTGATTCCAC
TGCACCTGCGTGGTGCTTATAGCTTGGGCTGCCCCCTGTGTGCTGCCCTGACACCCCTGA
TGCTTGCTTGGCCAATGAGCTGGCACCAATGTTCAGGCGAGTGCTGTCTTGGTTCAATGG
CCTGGCGCCCCAGATCTTCTCATGAGGTGCGGCCTGCACTACCTGGGCAACCCCTCTCTG
GTGCACGCCCAGAAATCTGTCGCACCT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC010204A_C01 KCC010204A_c01
         (567 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_114060.1| keratin associated protein 4-12; keratin associ...    44  0.001
ref|NP_115913.1| keratin associated protein 4.4 [Homo sapiens] g...    43  0.003
ref|NP_149445.2| keratin associated protein 4-5; keratin associa...    42  0.004
emb|CAC27576.1| keratin associated protein 4.5 [Homo sapiens]          42  0.006
ref|NP_083889.1| RIKEN cDNA 2310037K05 [Mus musculus] gi|1284460...    39  0.006

>ref|NP_114060.1| keratin associated protein 4-12; keratin associated protein 4.12
           [Homo sapiens] gi|12655460|emb|CAC27582.1| keratin
           associated protein 4.12 [Homo sapiens]
           gi|13278825|gb|AAH04180.1|AAH04180 Similar to RIKEN cDNA
           1110054P19 gene [Homo sapiens]
           gi|13278909|gb|AAH04212.1|AAH04212 Similar to RIKEN cDNA
           1110054P19 gene [Homo sapiens]
          Length = 201

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 34/123 (27%), Positives = 44/123 (35%), Gaps = 2/123 (1%)
 Frame = +2

Query: 86  TCARMTCL-PMCCLAPQECSCAVDVFYCAPTCCPNVCLGPLLVRTATPAVP*LG*VPRAD 262
           TC R TC  P CC++    SC      C P CC +VC  P   R +              
Sbjct: 69  TCCRTTCCRPSCCVS----SC------CRPQCCQSVCCQPTCCRPS-------------- 104

Query: 263 YCAWDTCLALSCVTL**PSMLRTCRCLGCLDSTA-PAWCL*LGLPPVCCPDTPDACLANE 439
            C   TC   +C           CR   C+ S   P  C  +   P CC   P  C+++ 
Sbjct: 105 -CCQTTCCRTTC-----------CRPSCCVSSCCRPQCCQSVCCQPTCC--RPSCCISSS 150

Query: 440 LAP 448
             P
Sbjct: 151 CCP 153

 Score = 40.4 bits (93), Expect = 0.017
 Identities = 33/116 (28%), Positives = 40/116 (34%), Gaps = 2/116 (1%)
 Frame = +2

Query: 86  TCARMTCL-PMCCLAPQECSCAVDVFYCAPTCCPNVCLGPLLVRTATPAVP*LG*VPRAD 262
           TC R TC  P CC++    SC      C P CC +VC  P   R +              
Sbjct: 29  TCCRTTCCRPSCCVS----SC------CRPQCCQSVCCQPTCCRPS-------------- 64

Query: 263 YCAWDTCLALSCVTL**PSMLRTCRCLGCLDSTA-PAWCL*LGLPPVCCPDTPDAC 427
            C   TC   +C           CR   C+ S   P  C  +   P CC   P  C
Sbjct: 65  -CCQTTCCRTTC-----------CRPSCCVSSCCRPQCCQSVCCQPTCC--RPSCC 106

 Score = 31.6 bits (70), Expect = 7.9
 Identities = 26/110 (23%), Positives = 34/110 (30%)
 Frame = +2

Query: 77  QWLTCARMTCLPMCCLAPQECSCAVDVFYCAPTCCPNVCLGPLLVRTATPAVP*LG*VPR 256
           Q + C    C P CC++            C P+CC + C  P                  
Sbjct: 132 QSVCCQPTCCRPSCCISSS----------CCPSCCESSCCRPCC---------------- 165

Query: 257 ADYCAWDTCLALSCVTL**PSMLRTCRCLGCLDSTAPAWCL*LGLPPVCC 406
              C    C  +SC T        TC    C+ ST P         P+CC
Sbjct: 166 ---CLRPVCGRVSCHT--------TCYRPTCVISTCPR--------PLCC 196

>ref|NP_115913.1| keratin associated protein 4.4 [Homo sapiens]
           gi|12655446|emb|CAC27575.1| keratin associated protein
           4.4 [Homo sapiens]
          Length = 166

 Score = 43.1 bits (100), Expect = 0.003
 Identities = 37/137 (27%), Positives = 46/137 (33%), Gaps = 15/137 (10%)
 Frame = +2

Query: 50  RNGSCSVTVQWLTCARMTCLPMCCLAPQEC------------SCAVDVFYCAPTCCPNVC 193
           R   C  T    TC R +C    C  PQ C            SC V    C P CC +VC
Sbjct: 22  RPSYCQTTCCRTTCCRPSCCVSSCCRPQCCQTTCCRTTCCHPSCCVSSC-CRPQCCQSVC 80

Query: 194 LGPLLVRTATPAVP*LG*VPRADYCAWDTCLALSCVTL**PSMLR--TCRCLGCLDS-TA 364
             P   R                 C   TC   +C     PS  R   C+ + C  +   
Sbjct: 81  CQPTCCR---------------PQCCQTTCCRTTCCR---PSCCRPQCCQSVCCQPTCCC 122

Query: 365 PAWCL*LGLPPVCCPDT 415
           P++C+     P CC  T
Sbjct: 123 PSYCVSSCCRPQCCQTT 139

>ref|NP_149445.2| keratin associated protein 4-5; keratin associated protein 4.5
           [Homo sapiens]
          Length = 186

 Score = 42.4 bits (98), Expect = 0.004
 Identities = 34/131 (25%), Positives = 43/131 (31%), Gaps = 14/131 (10%)
 Frame = +2

Query: 86  TCARMTCLPMCCLAPQEC------------SCAVDVFYCAPTCCPNVCLGPLLVRTATPA 229
           TC R TC    C  PQ C            SC +    C P CC + C  P   R +   
Sbjct: 29  TCCRTTCCRPSCCKPQCCQSVCYQPTCCHPSCCIS-SCCHPYCCESSCCRPCCCRPS--- 84

Query: 230 VP*LG*VPRADYCAWDTCLALSCVTL**PSMLRTCRCLGCLDSTA--PAWCL*LGLPPVC 403
                       C   TC   +C          TC C  C  S+   P  C  +   P C
Sbjct: 85  ------------CCQTTCCRTTCCR-------TTCCCPSCCVSSCCRPQCCQSVCCQPTC 125

Query: 404 CPDTPDACLAN 436
           C   P  C+++
Sbjct: 126 C--RPSCCISS 134

 Score = 38.9 bits (89), Expect = 0.049
 Identities = 35/128 (27%), Positives = 44/128 (34%), Gaps = 9/128 (7%)
 Frame = +2

Query: 50  RNGSCSVTVQWLTCARMTCL-PMCCLAPQECSCAVDVFYCAPTCCPNVCLGPLLVRTATP 226
           R   C  T    TC R TC  P CC++    SC      C P CC +VC  P   R +  
Sbjct: 82  RPSCCQTTCCRTTCCRTTCCCPSCCVS----SC------CRPQCCQSVCCQPTCCRPS-- 129

Query: 227 AVP*LG*VPRADYCAWDTCLALSCVTL**PSMLRTCRC-------LGCLDSTAPAWCL*L 385
                        C   +C   SC      S  R C C       + C  +     C+  
Sbjct: 130 -------------CCISSCCHPSCCE---SSCCRPCCCVRPVCGRVSCHTTCYRPTCVIS 173

Query: 386 GLP-PVCC 406
             P P+CC
Sbjct: 174 TCPRPLCC 181

 Score = 31.6 bits (70), Expect = 7.9
 Identities = 26/107 (24%), Positives = 34/107 (31%), Gaps = 1/107 (0%)
 Frame = +2

Query: 89  CARMTCLPMCCLAPQECSCAVDVFYCAPTCCPNVCLGPLLVRTATPAVP*LG*VPRADYC 268
           C    C P CC    E SC      C P+CC   C      RT                C
Sbjct: 61  CISSCCHPYCC----ESSCCRPC-CCRPSCCQTTCCRTTCCRTT---------------C 100

Query: 269 AWDTCLALSCVTL**PSMLRTCRCLGCLDSTA-PAWCL*LGLPPVCC 406
              +C   SC         + C+ + C  +   P+ C+     P CC
Sbjct: 101 CCPSCCVSSC------CRPQCCQSVCCQPTCCRPSCCISSCCHPSCC 141

>emb|CAC27576.1| keratin associated protein 4.5 [Homo sapiens]
          Length = 186

 Score = 42.0 bits (97), Expect = 0.006
 Identities = 34/131 (25%), Positives = 43/131 (31%), Gaps = 14/131 (10%)
 Frame = +2

Query: 86  TCARMTCLPMCCLAPQEC------------SCAVDVFYCAPTCCPNVCLGPLLVRTATPA 229
           TC R TC    C  PQ C            SC +    C P CC + C  P   R +   
Sbjct: 29  TCCRTTCCRPSCCKPQCCQSVCYQPTCCHPSCCIS-SCCRPYCCESSCCRPCCCRPS--- 84

Query: 230 VP*LG*VPRADYCAWDTCLALSCVTL**PSMLRTCRCLGCLDSTA--PAWCL*LGLPPVC 403
                       C   TC   +C          TC C  C  S+   P  C  +   P C
Sbjct: 85  ------------CCQTTCCRTTCCR-------TTCCCPSCCVSSCCRPQCCQSVCCQPTC 125

Query: 404 CPDTPDACLAN 436
           C   P  C+++
Sbjct: 126 C--RPSYCISS 134

 Score = 39.3 bits (90), Expect = 0.038
 Identities = 35/128 (27%), Positives = 44/128 (34%), Gaps = 9/128 (7%)
 Frame = +2

Query: 50  RNGSCSVTVQWLTCARMTCL-PMCCLAPQECSCAVDVFYCAPTCCPNVCLGPLLVRTATP 226
           R   C  T    TC R TC  P CC++    SC      C P CC +VC  P   R +  
Sbjct: 82  RPSCCQTTCCRTTCCRTTCCCPSCCVS----SC------CRPQCCQSVCCQPTCCRPS-- 129

Query: 227 AVP*LG*VPRADYCAWDTCLALSCVTL**PSMLRTCRC-------LGCLDSTAPAWCL*L 385
                       YC    C    C +    S  R C C       + C  +     C+  
Sbjct: 130 ------------YCISSCCHPSCCES----SCCRPCCCVRPVCGRVSCHTTCYRPTCVIS 173

Query: 386 GLP-PVCC 406
             P P+CC
Sbjct: 174 TCPRPLCC 181

 Score = 33.5 bits (75), Expect = 2.1
 Identities = 26/107 (24%), Positives = 35/107 (32%), Gaps = 1/107 (0%)
 Frame = +2

Query: 89  CARMTCLPMCCLAPQECSCAVDVFYCAPTCCPNVCLGPLLVRTATPAVP*LG*VPRADYC 268
           C    C P CC    E SC      C P+CC   C      RT                C
Sbjct: 61  CISSCCRPYCC----ESSCCRPC-CCRPSCCQTTCCRTTCCRTT---------------C 100

Query: 269 AWDTCLALSCVTL**PSMLRTCRCLGCLDSTA-PAWCL*LGLPPVCC 406
              +C   SC         + C+ + C  +   P++C+     P CC
Sbjct: 101 CCPSCCVSSC------CRPQCCQSVCCQPTCCRPSYCISSCCHPSCC 141

>ref|NP_083889.1| RIKEN cDNA 2310037K05 [Mus musculus] gi|12844600|dbj|BAB26426.1|
           unnamed protein product [Mus musculus]
          Length = 168

 Score = 38.5 bits (88), Expect(2) = 0.006
 Identities = 31/123 (25%), Positives = 43/123 (34%), Gaps = 3/123 (2%)
 Frame = +2

Query: 89  CARMTCLPMCCLAPQECSCAVDVFYCAPTCCPNVCLGPLLVRTATPAVP*LG*VPRADYC 268
           C++  C P CC++    SC      C P CC +VC  P   R +               C
Sbjct: 15  CSQGCCQPSCCVS----SC------CRPQCCQSVCCQPTCCRPS---------------C 49

Query: 269 AWDTCLALSCVTL**PSMLRTCRCLGCLDSTAPAWCL*LGLPPVCCPDT---PDACLANE 439
              +C   SC     PS  R   C+       P  C      P CC  +   P  C+++ 
Sbjct: 50  CISSCCRPSCCR---PSCCRPSCCVS--SCCRPQCCQSACCQPTCCRPSCCRPSCCISSC 104

Query: 440 LAP 448
             P
Sbjct: 105 CQP 107

 Score = 33.1 bits (74), Expect = 2.7
 Identities = 15/46 (32%), Positives = 16/46 (34%)
 Frame = +2

Query: 89  CARMTCLPMCCLAPQECSCAVDVFYCAPTCCPNVCLGPLLVRTATP 226
           C R  C P CCL P           C   CC   C  P  V +  P
Sbjct: 123 CCRPCCRPCCCLRP----------VCGQVCCQTTCYRPTCVISTCP 158

 Score = 22.7 bits (47), Expect(2) = 0.006
 Identities = 11/31 (35%), Positives = 13/31 (41%)
 Frame = +3

Query: 450 CSGECCLGSMAWRPRSSHEVRPALPGQPLSG 542
           C G  C GS   RP      RP    +P+ G
Sbjct: 109 CGGSSCCGSSCCRPCCRPCCRPCCCLRPVCG 139

EST assemble image

clone accession position 1 MX238c10_r BP091409 1 559 2 MX243c08_r BP091726 5 617

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