Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC008097A_C01 KCC008097A_c01
(382 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB18575.1| patched-2 [Xenopus laevis] 35 0.26
ref|ZP_00058460.1| COG0460: Homoserine dehydrogenase [Thermobifi... 34 0.44
ref|NP_742446.1| conserved hypothetical protein [Pseudomonas put... 33 0.75
ref|XP_317438.1| ENSANGP00000023635 [Anopheles gambiae] gi|30175... 32 1.7
ref|XP_204537.2| similar to ribosomal protein S28, cytosolic [va... 32 2.2
>dbj|BAB18575.1| patched-2 [Xenopus laevis]
Length = 1413
Score = 35.0 bits (79), Expect = 0.26
Identities = 23/63 (36%), Positives = 31/63 (48%), Gaps = 7/63 (11%)
Frame = +2
Query: 71 PTTVG-TRTQYQDKTQFEHQTRPRPFLYATP------PLHEGTHASRTANKSSRHATHPA 229
PT+ G TRT ++ +H TRP+ A P P H G+ + TA S A HP+
Sbjct: 1298 PTSSGPTRTNQPQNSRAQHNTRPQGHRTAPPAYCAKMPGHNGSITTVTATASVTVAVHPS 1357
Query: 230 LRG 238
L G
Sbjct: 1358 LPG 1360
>ref|ZP_00058460.1| COG0460: Homoserine dehydrogenase [Thermobifida fusca]
Length = 616
Score = 34.3 bits (77), Expect = 0.44
Identities = 34/99 (34%), Positives = 38/99 (38%), Gaps = 1/99 (1%)
Frame = +3
Query: 87 PGHN-TKTKHSLNTKHGRDRSCMQRLPYMRERMRRAQPIRAHVMPRTPRCAGSSAHALDD 263
P H T H L +HG+ R L R R R P RA V CAG +A
Sbjct: 17 PRHRRTGGHHPLRGRHGQGRGGDPHLCQCRRRYERQHPHRA-VRCGVHLCAGLAAQR--- 72
Query: 264 GHVQSAVSLGRTGYAPFRRRRHTLAHNQATSAPASTQPG 380
AV GR R RRH A PAS +PG
Sbjct: 73 -RRADAVPPGRQA---LRERRHRRARPLPPCRPASRRPG 107
>ref|NP_742446.1| conserved hypothetical protein [Pseudomonas putida KT2440]
gi|24981640|gb|AAN65910.1|AE016219_3 conserved
hypothetical protein [Pseudomonas putida KT2440]
Length = 401
Score = 33.5 bits (75), Expect = 0.75
Identities = 30/102 (29%), Positives = 39/102 (37%), Gaps = 2/102 (1%)
Frame = +2
Query: 62 HNHPTTVGTRTQYQDKTQFEHQT--RPRPFLYATPPLHEGTHASRTANKSSRHATHPALR 235
H H + TR Q D+ EHQ +PRPF T+ + + HP L
Sbjct: 4 HLHSPHLSTRFQALDQFLIEHQQLWKPRPF---------------TSLQLAWETAHPELA 48
Query: 236 GVLRSCT*RRARTERRVAWPHGVRSLPSPTAYTCTQPGDLCA 361
LR C+ A T+ A SLP+P Q L A
Sbjct: 49 AHLRQCSLADAETDTTAA------SLPAPFPQLAQQARQLSA 84
>ref|XP_317438.1| ENSANGP00000023635 [Anopheles gambiae] gi|30175421|gb|EAA43906.1|
ENSANGP00000023635 [Anopheles gambiae str. PEST]
Length = 594
Score = 32.3 bits (72), Expect = 1.7
Identities = 29/112 (25%), Positives = 38/112 (33%), Gaps = 5/112 (4%)
Frame = +1
Query: 58 SAQSPNHCWNQDTIPRQNTV*TPNTAATVPVCNASPT*GNACVAHSQ*ELTSCHAPRAAR 237
SA SP H + P T T TA+ VP C + T TS AA
Sbjct: 11 SAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTT------------TTSTSGASAAS 58
Query: 238 GPPLMHLTTGTYRAPCR-----LAARGTLPSVADGIHLHTTRRPLRRRPHSQ 378
P ++ +P L + G +P+ H H L PH Q
Sbjct: 59 SPTRDEMSLVVPISPLHIKQEPLGSDGPMPAQPPHHHQHPHHHQLPHHPHHQ 110
>ref|XP_204537.2| similar to ribosomal protein S28, cytosolic [validated] - rat [Mus
musculus]
Length = 615
Score = 32.0 bits (71), Expect = 2.2
Identities = 19/51 (37%), Positives = 22/51 (42%)
Frame = +1
Query: 208 TSCHAPRAARGPPLMHLTTGTYRAPCRLAARGTLPSVADGIHLHTTRRPLR 360
T HAPRA H+T G+ R A G L A H T+ PLR
Sbjct: 390 TDAHAPRAVLRGTAAHVTRGSLRTAAACAIGGALKETA----AHATQDPLR 436
