KCC006848A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC006848A_C01 KCC006848A_c01
tgcTTCATCTCACCATTAATGACAACCTAGCGCGGACAGATGGGTTCTTGCCTGGCAAAG
CCAGCTGAAAGTGCGGAACAAAAAAAAGCTAGCTCGGTTCCTTCGCCTCCGCCCGCACCT
GCTCCACAACCAGTGCAACAGGCAGCAGCGCCTGCTCCGAAAGACTCGGGCGACGTCAAG
CCAGGCCAGCAAGCGACTCCTGTGCCCCCGCCATCCCCACCGCCCCAGCCTAAGCCTGCT
CCTCCTGCGCAGCCCGCGCCCGCTCCGGCTGCCAAGGTGGTAGAGGCTATCCCTGGCAGT
TGCAGACGAGAAGTCTCCCCAGGGCAAGCAGCCGCGGAGGTCGCAGGAGCACGACAACGG
AGTAAAAGCCGAGGAGATTGAACTCGTCAAGCAGAAGTCGACAGAGCCTCAACCCTCAGC
AAGTGCTACTGCAGCAGTTGCTACACCTAAAGCAATAGAACCAGCTATGGAGCCAAAGGT
CGCTGCACCATCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC006848A_C01 KCC006848A_c01
         (493 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAQ23078.1| gliding motility related CaM kinase [Chlamydomona...   179  4e-77
gb|AAN37735.1| PspA [Streptococcus pneumoniae]                         75  6e-13
gb|AAF70094.1|AF255904_1 PspA [Streptococcus pneumoniae]               72  4e-12
gb|AAF70093.1|AF255903_1 PspA [Streptococcus pneumoniae]               72  4e-12
gb|AAF70095.1|AF255905_1 PspA [Streptococcus pneumoniae]               72  4e-12

>gb|AAQ23078.1| gliding motility related CaM kinase [Chlamydomonas reinhardtii]
          Length = 465

 Score =  179 bits (453), Expect(2) = 4e-77
 Identities = 85/85 (100%), Positives = 85/85 (100%)
 Frame = +1

Query: 40  MGSCLAKPAESAEQKKASSVPSPPPAPAPQPVQQAAAPAPKDSGDVKPGQQATPVPPPSP 219
           MGSCLAKPAESAEQKKASSVPSPPPAPAPQPVQQAAAPAPKDSGDVKPGQQATPVPPPSP
Sbjct: 1   MGSCLAKPAESAEQKKASSVPSPPPAPAPQPVQQAAAPAPKDSGDVKPGQQATPVPPPSP 60

Query: 220 PPQPKPAPPAQPAPAPAAKVVEAIP 294
           PPQPKPAPPAQPAPAPAAKVVEAIP
Sbjct: 61  PPQPKPAPPAQPAPAPAAKVVEAIP 85

 Score =  130 bits (328), Expect(2) = 4e-77
 Identities = 66/66 (100%), Positives = 66/66 (100%)
 Frame = +2

Query: 296 AVADEKSPQGKQPRRSQEHDNGVKAEEIELVKQKSTEPQPSASATAAVATPKAIEPAMEP 475
           AVADEKSPQGKQPRRSQEHDNGVKAEEIELVKQKSTEPQPSASATAAVATPKAIEPAMEP
Sbjct: 86  AVADEKSPQGKQPRRSQEHDNGVKAEEIELVKQKSTEPQPSASATAAVATPKAIEPAMEP 145

Query: 476 KVAAPS 493
           KVAAPS
Sbjct: 146 KVAAPS 151

>gb|AAN37735.1| PspA [Streptococcus pneumoniae]
          Length = 224

 Score = 74.7 bits (182), Expect = 6e-13
 Identities = 38/77 (49%), Positives = 45/77 (58%), Gaps = 5/77 (6%)
 Frame = +1

Query: 73  AEQKKA-----SSVPSPPPAPAPQPVQQAAAPAPKDSGDVKPGQQATPVPPPSPPPQPKP 237
           A+ KKA     + VP+P PAPAP P  +A APAP  +  +KP     PVP P P P P P
Sbjct: 105 ADLKKAVDEPETPVPAPAPAPAPAPTPEAPAPAPAPAPALKPAPALKPVPAPKPAPAPAP 164

Query: 238 APPAQPAPAPAAKVVEA 288
           AP  +PAPAPA K   A
Sbjct: 165 APAPKPAPAPAPKPAPA 181

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 34/77 (44%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
 Frame = +1

Query: 61  PAESAEQKKASS---VPSPPPAPAPQPVQQAAAPAPKDSGDVKPGQQATPVPPPSPPPQP 231
           PA +   K A +   VP+P PAPAP P   A AP P  +   KP     P P P+P P P
Sbjct: 138 PAPAPALKPAPALKPVPAPKPAPAPAP---APAPKPAPAPAPKPAPAPAPAPKPAPAPAP 194

Query: 232 KPAP--PAQPAPAPAAK 276
            P P  PA+  PAPA K
Sbjct: 195 APKPEKPAE-KPAPALK 210

 Score = 40.8 bits (94), Expect = 0.009
 Identities = 26/68 (38%), Positives = 32/68 (46%), Gaps = 5/68 (7%)
 Frame = +1

Query: 148 APAPKDSGDVKPG--QQATPVPPPSPPPQPKPAPPAQ---PAPAPAAKVVEAIPGSCRRE 312
           A   K   D+K    +  TPVP P+P P P P P A    PAPAPA K   A+      +
Sbjct: 98  AELEKAEADLKKAVDEPETPVPAPAPAPAPAPTPEAPAPAPAPAPALKPAPALKPVPAPK 157

Query: 313 VSPGQAAA 336
            +P  A A
Sbjct: 158 PAPAPAPA 165

 Score = 37.0 bits (84), Expect = 0.13
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
 Frame = +1

Query: 58  KPAES---AEQKKASSVPSPPPAPAPQPVQQAAAPAPKDSGDVKPGQQATPVPPPSPPPQ 228
           KPA +   A   K +  P+P PAPAP P   A  PAP  +   KP + A    P   P  
Sbjct: 157 KPAPAPAPAPAPKPAPAPAPKPAPAPAP---APKPAPAPAPAPKPEKPAEKPAPALKPET 213

Query: 229 PK 234
           PK
Sbjct: 214 PK 215

>gb|AAF70094.1|AF255904_1 PspA [Streptococcus pneumoniae]
          Length = 247

 Score = 72.0 bits (175), Expect = 4e-12
 Identities = 32/64 (50%), Positives = 38/64 (59%)
 Frame = +1

Query: 76  EQKKASSVPSPPPAPAPQPVQQAAAPAPKDSGDVKPGQQATPVPPPSPPPQPKPAPPAQP 255
           E +  +  P+P PAPAP P  +A APAPK +   KP     P P P P P PKPAP  +P
Sbjct: 169 EPETPAPAPAPKPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 228

Query: 256 APAP 267
           APAP
Sbjct: 229 APAP 232

 Score = 54.7 bits (130), Expect = 6e-07
 Identities = 27/63 (42%), Positives = 32/63 (49%)
 Frame = +1

Query: 58  KPAESAEQKKASSVPSPPPAPAPQPVQQAAAPAPKDSGDVKPGQQATPVPPPSPPPQPKP 237
           KPA +      +  P+P PAPAP+P     APAPK +   KP     P P P P P PKP
Sbjct: 180 KPAPAPAPTPEAPAPAPKPAPAPKP-----APAPKPAPAPKPAPAPKPAPAPKPAPAPKP 234

Query: 238 APP 246
             P
Sbjct: 235 ETP 237

 Score = 36.6 bits (83), Expect = 0.17
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +1

Query: 121 APQPVQQAAAPAPKDSGDVKPGQQATPVPPPSPPPQPKPAP-PAQPAPAPAAKVVEA 288
           A + +    A       D+K        P P+P P+P PAP P   APAPA K   A
Sbjct: 145 AKKDLDAKKAELENTEADLKKAVDEPETPAPAPAPKPAPAPAPTPEAPAPAPKPAPA 201

>gb|AAF70093.1|AF255903_1 PspA [Streptococcus pneumoniae]
          Length = 243

 Score = 72.0 bits (175), Expect = 4e-12
 Identities = 32/64 (50%), Positives = 38/64 (59%)
 Frame = +1

Query: 76  EQKKASSVPSPPPAPAPQPVQQAAAPAPKDSGDVKPGQQATPVPPPSPPPQPKPAPPAQP 255
           E +  +  P+P PAPAP P  +A APAPK +   KP     P P P P P PKPAP  +P
Sbjct: 147 EPETPAPAPAPKPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 206

Query: 256 APAP 267
           APAP
Sbjct: 207 APAP 210

 Score = 67.8 bits (164), Expect = 7e-11
 Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +1

Query: 58  KPAESAEQKKASSVPSPPPAPAPQPVQQAA-APAPKDSGDVKPGQQATPVPPPSPPPQPK 234
           KPA +      +  P+P PAPAP+P      APAPK +   KP     P P P P P PK
Sbjct: 158 KPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPK 217

Query: 235 PAPPAQPAPAP 267
           PAP  +PAPAP
Sbjct: 218 PAPAPKPAPAP 228

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 27/67 (40%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
 Frame = +1

Query: 61  PAESAEQKKASSVPSPPPAPAPQPVQQAA-----APAPKDSGDVKPGQQATPVPPPSPPP 225
           P   A   K +  P P PAP P P  + A     APAPK +   KP     P P P P P
Sbjct: 167 PEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAP 226

Query: 226 QPKPAPP 246
            PKP  P
Sbjct: 227 APKPETP 233

 Score = 40.0 bits (92), Expect = 0.015
 Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +1

Query: 58  KPAESAEQKKASS-VPSPPPAPAPQPVQQAAAPAPKDSGDVKPGQQATPVPPPSPPPQ 228
           KPA + +   A    P+P PAPAP+P     APAPK +   KP     P P P+P P+
Sbjct: 181 KPAPAPKPAPAPKPAPAPKPAPAPKP-----APAPKPAPAPKPAP--APKPAPAPKPE 231

 Score = 36.6 bits (83), Expect = 0.17
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +1

Query: 121 APQPVQQAAAPAPKDSGDVKPGQQATPVPPPSPPPQPKPAP-PAQPAPAPAAKVVEA 288
           A + +    A       D+K        P P+P P+P PAP P   APAPA K   A
Sbjct: 123 AKKDLDAKKAELENTEADLKKAVDEPETPAPAPAPKPAPAPAPTPEAPAPAPKPAPA 179

>gb|AAF70095.1|AF255905_1 PspA [Streptococcus pneumoniae]
          Length = 244

 Score = 72.0 bits (175), Expect = 4e-12
 Identities = 32/64 (50%), Positives = 38/64 (59%)
 Frame = +1

Query: 76  EQKKASSVPSPPPAPAPQPVQQAAAPAPKDSGDVKPGQQATPVPPPSPPPQPKPAPPAQP 255
           E +  +  P+P PAPAP P  +A APAPK +   KP     P P P P P PKPAP  +P
Sbjct: 148 EPETPAPAPAPKPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKP 207

Query: 256 APAP 267
           APAP
Sbjct: 208 APAP 211

 Score = 67.8 bits (164), Expect = 7e-11
 Identities = 33/71 (46%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
 Frame = +1

Query: 58  KPAESAEQKKASSVPSPPPAPAPQPVQQAA-APAPKDSGDVKPGQQATPVPPPSPPPQPK 234
           KPA +      +  P+P PAPAP+P      APAPK +   KP     P P P P P PK
Sbjct: 159 KPAPAPAPTPEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPK 218

Query: 235 PAPPAQPAPAP 267
           PAP  +PAPAP
Sbjct: 219 PAPAPKPAPAP 229

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 27/67 (40%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
 Frame = +1

Query: 61  PAESAEQKKASSVPSPPPAPAPQPVQQAA-----APAPKDSGDVKPGQQATPVPPPSPPP 225
           P   A   K +  P P PAP P P  + A     APAPK +   KP     P P P P P
Sbjct: 168 PEAPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAPAPKPAP 227

Query: 226 QPKPAPP 246
            PKP  P
Sbjct: 228 APKPETP 234

 Score = 40.0 bits (92), Expect = 0.015
 Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
 Frame = +1

Query: 58  KPAESAEQKKASS-VPSPPPAPAPQPVQQAAAPAPKDSGDVKPGQQATPVPPPSPPPQ 228
           KPA + +   A    P+P PAPAP+P     APAPK +   KP     P P P+P P+
Sbjct: 182 KPAPAPKPAPAPKPAPAPKPAPAPKP-----APAPKPAPAPKPAP--APKPAPAPKPE 232

 Score = 36.6 bits (83), Expect = 0.17
 Identities = 20/57 (35%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
 Frame = +1

Query: 121 APQPVQQAAAPAPKDSGDVKPGQQATPVPPPSPPPQPKPAP-PAQPAPAPAAKVVEA 288
           A + +    A       D+K        P P+P P+P PAP P   APAPA K   A
Sbjct: 124 AKKDLDAKKAELENTEADLKKAVDEPETPAPAPAPKPAPAPAPTPEAPAPAPKPAPA 180



EST assemble image


clone accession position
1 LC051a07_r AV622542 1 400
2 MX245f11_r BP091884 4 493




Chlamydomonas reinhardtii
Kazusa DNA Research Institute