Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC006824A_C01 KCC006824A_c01
(394 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP36177.1| Homo sapiens RAB, member of RAS oncogene family-l... 83 1e-15
ref|NP_080207.1| RIKEN cDNA 2600013G09 [Mus musculus] gi|2017805... 83 1e-15
sp|Q9BW83|RAYL_HUMAN Putative GTP-binding protein RAY-like (Rab-... 83 1e-15
ref|NP_006851.1| RAB, member of RAS oncogene family-like 4 [Homo... 79 1e-14
gb|AAO49245.1|AF460175_1 GTPase Rab11-like protein [Giardia inte... 65 3e-10
>gb|AAP36177.1| Homo sapiens RAB, member of RAS oncogene family-like 4 [synthetic
construct]
Length = 187
Score = 82.8 bits (203), Expect = 1e-15
Identities = 39/97 (40%), Positives = 61/97 (62%)
Frame = +1
Query: 97 LRCKVAVVGEATVGKSALISMFTSKVSKFLKDYAMTSGVEVVVAPVTIPDTMVSVELFLL 276
L K + G+ VGK+AL +F S + F K Y +T+G+++VV V +PDT SVELF+
Sbjct: 4 LAAKCILAGDPAVGKTALAQIFRSDGAHFQKSYTLTTGMDLVVKTVPVPDTGDSVELFIF 63
Query: 277 DTVGSDLYNEQISQYWNGVY*AILVFDVSSMESFESC 387
D+ G +L++E + + W LV+DV++ ESF +C
Sbjct: 64 DSAGKELFSEMLDKLWESPNVLCLVYDVTNEESFNNC 100
>ref|NP_080207.1| RIKEN cDNA 2600013G09 [Mus musculus]
gi|20178059|sp|Q9D0P8|RAYL_MOUSE Putative GTP-binding
protein RAY-like (Rab-like protein 4)
gi|17028400|gb|AAH17514.1| RIKEN cDNA 2600013G09 [Mus
musculus]
Length = 186
Score = 82.8 bits (203), Expect = 1e-15
Identities = 40/97 (41%), Positives = 62/97 (63%)
Frame = +1
Query: 97 LRCKVAVVGEATVGKSALISMFTSKVSKFLKDYAMTSGVEVVVAPVTIPDTMVSVELFLL 276
L K + G+ VGK+AL+ MF S + F K+Y +T+GV++VV V + DT SVELF+
Sbjct: 4 LAAKCILAGDPAVGKTALVQMFRSDGTHFQKNYTLTTGVDLVVKTVPVLDTNDSVELFIF 63
Query: 277 DTVGSDLYNEQISQYWNGVY*AILVFDVSSMESFESC 387
D+ G +L++E + + W LV+DV++ +SF SC
Sbjct: 64 DSAGKELFSEMLDKLWENPNVLCLVYDVTNEQSFISC 100
>sp|Q9BW83|RAYL_HUMAN Putative GTP-binding protein RAY-like (Rab-like protein 4)
gi|12653581|gb|AAH00566.1| RAB, member of RAS oncogene
family-like 4 [Homo sapiens] gi|30582469|gb|AAP35461.1|
RAB, member of RAS oncogene family-like 4 [Homo sapiens]
Length = 186
Score = 82.8 bits (203), Expect = 1e-15
Identities = 39/97 (40%), Positives = 61/97 (62%)
Frame = +1
Query: 97 LRCKVAVVGEATVGKSALISMFTSKVSKFLKDYAMTSGVEVVVAPVTIPDTMVSVELFLL 276
L K + G+ VGK+AL +F S + F K Y +T+G+++VV V +PDT SVELF+
Sbjct: 4 LAAKCILAGDPAVGKTALAQIFRSDGAHFQKSYTLTTGMDLVVKTVPVPDTGDSVELFIF 63
Query: 277 DTVGSDLYNEQISQYWNGVY*AILVFDVSSMESFESC 387
D+ G +L++E + + W LV+DV++ ESF +C
Sbjct: 64 DSAGKELFSEMLDKLWESPNVLCLVYDVTNEESFNNC 100
>ref|NP_006851.1| RAB, member of RAS oncogene family-like 4 [Homo sapiens]
gi|3093311|emb|CAA18787.1| hypothetical protein [Homo
sapiens] gi|6572351|emb|CAB62968.1| cE132D12.1 (novel
protein sharing domains with RAS-related proteins) [Homo
sapiens]
Length = 185
Score = 79.3 bits (194), Expect = 1e-14
Identities = 36/91 (39%), Positives = 59/91 (64%)
Frame = +1
Query: 115 VVGEATVGKSALISMFTSKVSKFLKDYAMTSGVEVVVAPVTIPDTMVSVELFLLDTVGSD 294
++ + VGK+AL +F S + F K Y +T+G+++VV V +PDT SVELF+ D+ G +
Sbjct: 9 ILADPAVGKTALAQIFRSDGAHFQKSYTLTTGMDLVVKTVPVPDTGDSVELFIFDSAGKE 68
Query: 295 LYNEQISQYWNGVY*AILVFDVSSMESFESC 387
L++E + + W LV+DV++ ESF +C
Sbjct: 69 LFSEMLDKLWESPNVLCLVYDVTNEESFNNC 99
>gb|AAO49245.1|AF460175_1 GTPase Rab11-like protein [Giardia intestinalis]
gi|29248068|gb|EAA39611.1| GLP_192_7961_8611 [Giardia
lamblia ATCC 50803]
Length = 216
Score = 64.7 bits (156), Expect = 3e-10
Identities = 37/96 (38%), Positives = 53/96 (54%), Gaps = 2/96 (2%)
Frame = +1
Query: 106 KVAVVGEATVGKSALISMFTSKVSKFLKDYAMTSGVEVVVAPVTIP--DTMVSVELFLLD 279
K+ ++G++ VGKS ++S FTS +KF A T GVE +T+ M+S L D
Sbjct: 10 KLILIGDSAVGKSNILSRFTS--NKFNASSAATIGVEFTTKTLTVEVQGKMISTRLQCWD 67
Query: 280 TVGSDLYNEQISQYWNGVY*AILVFDVSSMESFESC 387
T G + Y S Y+ G + +LVFDV+ SFE C
Sbjct: 68 TAGQERYRSITSSYYRGAHGCLLVFDVTKRTSFEHC 103
