KCC005993A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC005993A_C01 KCC005993A_c01
CAGCGGTTCCAATTACACGGCTGCCCTCCCTAATCAAAATGGGTGGGGCGTATGATGAGC
CCGCGCTGACACTTGATTCAGCCAAAAGATCATACCGGGTTATACCTCCTGCGATGTTTC
CATGCTTAGCTAGTTAGGTAGCATTGCATTAAGCGTGGTGCTCAGTGCAAGCCAAACGCG
TGCGTCTGATCATGTCAGTCAATCAGCCTAGAACCTGTACGTGCCAGCGCGGTCAGTCTC
TACTCTGGGTCGTAGTCAATCCCCAACCCACCGCCAGTAAGCTACCGTCGAGTCATAAGT
TCACCTGCGTTCTTCTCCCTCTATGCCTACTCGCGCCTCACACCAACCACCCCTCAACCC
CTCGCCTAGTGGCCATCTGCAGCTTGTCCATGTGCCGCCTTAAGACGACAGCCAGCTGTA
TGTCGTGGTCATCTCCTCGGCATCCTCGGGCATCGCAAAGAAAGCCTTG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC005993A_C01 KCC005993A_c01
         (469 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_012081.1| FLO5- and FLO8-determined flocculation are cons...    36  0.25
dbj|BAB32536.1| alpha-amylase [Drosophila melanogaster]                33  1.2
gb|AAP92404.1| HapB [Aspergillus niger]                                32  3.6
ref|XP_321190.1| ENSANGP00000020230 [Anopheles gambiae] gi|21289...    31  6.2
dbj|BAB41197.1| hypothetical protein [Glycine max]                     31  6.2

>ref|NP_012081.1| FLO5- and FLO8-determined flocculation are considerably less
            sensitive to mannose than FLO1-determined flocculation.;
            Flo5p [Saccharomyces cerevisiae]
            gi|731580|sp|P38894|FLO5_YEAST Flocculation protein FLO5
            precursor (Flocculin 5) gi|626147|pir||S48992
            flocculation protein homolog YHR211w - yeast
            (Saccharomyces cerevisiae) gi|458919|gb|AAB69731.1|
            Yhr211wp [Saccharomyces cerevisiae]
          Length = 1075

 Score = 35.8 bits (81), Expect = 0.25
 Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 5/115 (4%)
 Frame = +2

Query: 140  SIALSVVLSASQTRASDHVSQSA*NLYVPARSVSTLGRSQSPTHRQ*ATVES*VHLRSSP 319
            S   S V+S+S T ++   S+S+ +  +P  S ST G S+S T    ++  S      SP
Sbjct: 686  SFISSSVISSSTTTSTSIFSESSTSSVIPTSS-STSGSSESKTSSASSSSSSSSISSESP 744

Query: 320  SMPTRASHQ-PPLNPSPSGHLQLVHVPP----*DDSQLYVVVISSASSGIAKKAL 469
              PT +S   PP+  + +G      +PP        Q  +V ++S  S +  +++
Sbjct: 745  KSPTNSSSSLPPVTSATTGQETASSLPPATTTKTSEQTTLVTVTSCESHVCTESI 799

>dbj|BAB32536.1| alpha-amylase [Drosophila melanogaster]
          Length = 195

 Score = 33.5 bits (75), Expect = 1.2
 Identities = 24/79 (30%), Positives = 33/79 (41%), Gaps = 7/79 (8%)
 Frame = +1

Query: 202 ISLEPVRASAVS---LYSGS*SIPNPPPVSYRRV----ISSPAFFSLYAYSRLTPTTPQP 360
           + + PV  +AV    + +G  ++ NP P S+R       SSPA+ S    S   PT    
Sbjct: 58  VQVSPVNENAVKDSRVGNGGGNVTNPSPTSWRPAPETRSSSPAWSSAATPSECAPTWTWS 117

Query: 361 LA*WPSAACPCAALRRQPA 417
              WP    P A     PA
Sbjct: 118 STTWPPTEAPTALAAAPPA 136

>gb|AAP92404.1| HapB [Aspergillus niger]
          Length = 373

 Score = 32.0 bits (71), Expect = 3.6
 Identities = 21/68 (30%), Positives = 36/68 (52%)
 Frame = +2

Query: 182 ASDHVSQSA*NLYVPARSVSTLGRSQSPTHRQ*ATVES*VHLRSSPSMPTRASHQPPLNP 361
           AS H++  A     P  + ST+G   SPT+ Q    ++    ++SP +P+++ +QP  N 
Sbjct: 18  ASSHIT--APYQTAPQSAGSTVGSMTSPTNPQARMQQAHATHQASPIVPSQSHYQPAQNA 75

Query: 362 SPSGHLQL 385
             S H Q+
Sbjct: 76  PGSVHQQM 83

>ref|XP_321190.1| ENSANGP00000020230 [Anopheles gambiae] gi|21289304|gb|EAA01597.1|
           ENSANGP00000020230 [Anopheles gambiae str. PEST]
          Length = 608

 Score = 31.2 bits (69), Expect = 6.2
 Identities = 21/65 (32%), Positives = 28/65 (42%)
 Frame = +3

Query: 270 TASKLPSSHKFTCVLLPLCLLAPHTNHPSTPRLVAICSLSMCRLKTTASCMSWSSPRHPR 449
           T  K P  + F C +   C+   + N  S P L   C+   CR K   SC+  SS  + R
Sbjct: 452 TPVKRPPLNPFLCAV---CMGPENKNKYSKPELFVRCT--RCRRKAHPSCIGMSSVMYKR 506

Query: 450 ASQRK 464
             Q K
Sbjct: 507 VQQYK 511

>dbj|BAB41197.1| hypothetical protein [Glycine max]
          Length = 620

 Score = 31.2 bits (69), Expect = 6.2
 Identities = 24/68 (35%), Positives = 32/68 (46%), Gaps = 7/68 (10%)
 Frame = +2

Query: 185 SDHVSQSA*NLYVPARS-------VSTLGRSQSPTHRQ*ATVES*VHLRSSPSMPTRASH 343
           S H   SA +L +P R        VS+   SQ+P H+    V+      S PS+P  A  
Sbjct: 370 SIHSETSAPSLVIPGRLLQPGPSIVSSAQPSQAP-HKDVEVVQVSSTSSSEPSVPVLAET 428

Query: 344 QPPLNPSP 367
           QPP+ P P
Sbjct: 429 QPPILPLP 436



EST assemble image


clone accession position
1 MX224g03_r BP090492 1 305
2 HCL056b09_r AV642695 37 505




Chlamydomonas reinhardtii
Kazusa DNA Research Institute