KCC005366A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC005366A_C01 KCC005366A_c01
catTTGTGAGCAGTTACAAATAACTCAAAGCACCCGCTCACATCCCCGTTGCGCCAGCCT
GTGCGGAGTGGACTGCGTTGGCATGTCGGGAGTCAGCTCCGACATGTCCACCTGGTCTGG
CCTCAGCGCAGTTGCTCTGTGCCACACCATGGACGCAGCCCGGCTCCGCTTATACTTCAA
ACGCCATGCAAGTCTTCCTGTGATCGTCGGGGGCCGGGTGCTCCCGGACTCCCTGGACCT
GGCTACCTCTACATCGCAGCCCCAACCCAGCCAACACACGAAACACACGATCTGACGGGT
TTCCGCCCTCTCCACCCGCCCCTTCGAAGCCTCCCAACCTCCATCTCCGCCTCCACCCAG
CACTATACAGCCGCCGCAACAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC005366A_C01 KCC005366A_c01
         (382 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAE05204.1| OSJNBa0070C17.11 [Oryza sativa (japonica cultiva...    39  0.014
dbj|BAA83016.2| KIAA1064 protein [Homo sapiens]                        33  0.033
sp|Q99014|KPC1_TRIRE Protein kinase C-like gi|2133306|pir||S6191...    32  0.072
dbj|BAB07956.1| putative extensin-like protein [Oryza sativa (ja...    30  0.074
ref|NP_177036.1| protein kinase family [Arabidopsis thaliana] gi...    31  0.12

>emb|CAE05204.1| OSJNBa0070C17.11 [Oryza sativa (japonica cultivar-group)]
          Length = 202

 Score = 39.3 bits (90), Expect = 0.014
 Identities = 31/103 (30%), Positives = 38/103 (36%), Gaps = 8/103 (7%)
 Frame = +3

Query: 48  VAPACAEWTALACRESAPTCPP-------GLASAQLLCATPWTQPGSAYTSNAMQVFL*S 206
           +APA A W    C  + P  PP          +      TPWT P +  T          
Sbjct: 22  LAPAAATWCGSNCPTTKPPPPPCQPPPPTPTPATPTTPPTPWTPPPATPTPP-------- 73

Query: 207 SGAGCSRTPWTWLPLHRSPNPANTRNTRSDGFPPSP-PAPSKP 332
                + TPWT  P    P PA      +   PP+P PAPS P
Sbjct: 74  -----TPTPWTPTPATPPPTPATPATPTT---PPTPAPAPSTP 108

>dbj|BAA83016.2| KIAA1064 protein [Homo sapiens]
          Length = 1315

 Score = 33.5 bits (75), Expect(2) = 0.033
 Identities = 13/19 (68%), Positives = 14/19 (73%)
 Frame = +2

Query: 320 PFEASQPPSPPPPSTIQPP 376
           P E+  PPSPPPPST  PP
Sbjct: 24  PSESPPPPSPPPPSTPSPP 42

 Score = 23.5 bits (49), Expect(2) = 0.033
 Identities = 10/23 (43%), Positives = 12/23 (51%)
 Frame = +3

Query: 267 PANTRNTRSDGFPPSPPAPSKPP 335
           PA      + G PP PP+ S PP
Sbjct: 8   PAFGTMEAAPGTPPPPPSESPPP 30

>sp|Q99014|KPC1_TRIRE Protein kinase C-like gi|2133306|pir||S61918 protein kinase C (EC
           2.7.1.-) PKC1 - fungus (Trichoderma reesei)
           gi|501075|gb|AAA97432.1| protein kinase C
          Length = 1139

 Score = 31.6 bits (70), Expect(2) = 0.072
 Identities = 14/30 (46%), Positives = 16/30 (52%)
 Frame = +3

Query: 246 PLHRSPNPANTRNTRSDGFPPSPPAPSKPP 335
           P H   NPA+  N    GFP  PPA  +PP
Sbjct: 704 PQHHKYNPADYANV-DQGFPAQPPAQQRPP 732

 Score = 24.3 bits (51), Expect(2) = 0.072
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 329 ASQPPSPPPPSTIQPPQ 379
           A  PP  PPP    PPQ
Sbjct: 743 AQMPPQQPPPQQPLPPQ 759

>dbj|BAB07956.1| putative extensin-like protein [Oryza sativa (japonica
           cultivar-group)] gi|13161443|dbj|BAB33013.1| putative
           extensin-like protein [Oryza sativa (japonica
           cultivar-group)]
          Length = 579

 Score = 30.4 bits (67), Expect(2) = 1.2
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +2

Query: 320 PFEASQPPSPPPPSTIQPP 376
           P  +  PPSPPPPST  PP
Sbjct: 390 PPPSPPPPSPPPPSTSPPP 408

 Score = 28.9 bits (63), Expect(2) = 0.074
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = +3

Query: 258 SPNPANTRNTRSDGFPPSPPAPSKPP 335
           SP P +T        PPSPP PS PP
Sbjct: 398 SPPPPSTSPPPPSPPPPSPPPPSPPP 423

 Score = 27.3 bits (59), Expect(2) = 2.6
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 258 SPNPANTRNTRSDGFPPSPPAPSKPP 335
           SP P +     +   PPSPP PS PP
Sbjct: 393 SPPPPSPPPPSTSPPPPSPPPPSPPP 418

 Score = 26.9 bits (58), Expect(2) = 0.074
 Identities = 10/17 (58%), Positives = 10/17 (58%)
 Frame = +2

Query: 323 FEASQPPSPPPPSTIQP 373
           F   QPP PPPP   QP
Sbjct: 428 FHPPQPPPPPPPPAPQP 444

 Score = 25.8 bits (55), Expect(2) = 1.2
 Identities = 9/11 (81%), Positives = 9/11 (81%)
 Frame = +3

Query: 303 PPSPPAPSKPP 335
           PPSPP PS PP
Sbjct: 386 PPSPPPPSPPP 396

 Score = 25.8 bits (55), Expect(2) = 1.2
 Identities = 10/18 (55%), Positives = 11/18 (60%)
 Frame = +2

Query: 320 PFEASQPPSPPPPSTIQP 373
           P  +  PPSPPPPS   P
Sbjct: 402 PSTSPPPPSPPPPSPPPP 419

 Score = 23.1 bits (48), Expect(2) = 2.6
 Identities = 9/20 (45%), Positives = 9/20 (45%)
 Frame = +2

Query: 320 PFEASQPPSPPPPSTIQPPQ 379
           P     PP PPPP     PQ
Sbjct: 424 PAPIFHPPQPPPPPPPPAPQ 443

 Score = 21.2 bits (43), Expect(2) = 1.2
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = +3

Query: 267 PANTRNTRSDGFPPSPPAPSKPP 335
           P N    +   F P+ P PS PP
Sbjct: 364 PVNCAAFQCKPFVPALPPPSPPP 386

>ref|NP_177036.1| protein kinase family [Arabidopsis thaliana]
           gi|25404764|pir||D96711 hypothetical protein F24J5.8
           [imported] - Arabidopsis thaliana
           gi|5734709|gb|AAD49974.1|AC008075_7 Contains PF|00069
           Eukaryotic protein kinase domain. [Arabidopsis thaliana]
           gi|14334806|gb|AAK59581.1| putative protein kinase
           [Arabidopsis thaliana] gi|21280865|gb|AAM44925.1|
           putative protein kinase [Arabidopsis thaliana]
          Length = 708

 Score = 30.8 bits (68), Expect = 4.9
 Identities = 21/59 (35%), Positives = 25/59 (41%), Gaps = 7/59 (11%)
 Frame = +2

Query: 221 LPDSLDLATSTSQPQPSQHTKHTI*RVSALSTRPFEASQPP-------SPPPPSTIQPP 376
           LP S     S   P+PS      + R    S RP ++  PP       SPPPPS   PP
Sbjct: 119 LPSSPPPPASVPPPRPSPSPPILV-RSPPPSVRPIQSPPPPPSDRPTQSPPPPSPPSPP 176

 Score = 28.1 bits (61), Expect(2) = 0.12
 Identities = 11/23 (47%), Positives = 15/23 (64%)
 Frame = +2

Query: 311 STRPFEASQPPSPPPPSTIQPPQ 379
           S RP ++  PPSPP P + +P Q
Sbjct: 189 SERPTQSPPPPSPPSPPSDRPSQ 211

 Score = 26.9 bits (58), Expect(2) = 0.12
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +3

Query: 246 PLHRSPNPANTRNTRSDGFPPSPPAPSKPPN 338
           P+   P P + R T+S    P PP+P  PP+
Sbjct: 151 PIQSPPPPPSDRPTQS----PPPPSPPSPPS 177

 Score = 26.6 bits (57), Expect(2) = 2.5
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 338 PPSPPPPSTIQPPQ 379
           P SPPPP+++ PP+
Sbjct: 120 PSSPPPPASVPPPR 133

 Score = 23.9 bits (50), Expect(2) = 2.5
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = +3

Query: 258 SPNPANTRNTRSDGFPPSPPAPSKPPN 338
           +P P   +   S   PP P  PS PP+
Sbjct: 67  APPPPLPKPPESSSPPPQPVIPSPPPS 93



EST assemble image


clone accession position
1 MX254b01_r BP092430 1 295
2 HC079a09_r AV637896 42 422




Chlamydomonas reinhardtii
Kazusa DNA Research Institute