Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC005360A_C01 KCC005360A_c01
(843 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S51798 gamma-kafirin precursor - sorghum 50 6e-05
emb|CAA44347.1| gamma-kafirin preprotein [Sorghum bicolor] 50 6e-05
gb|AAA73078.1| [Sorghum bicolor endosperm tissue mRNA, complete ... 49 8e-05
dbj|BAC85667.1| unnamed protein product [Homo sapiens] 44 0.003
ref|XP_287116.1| hypothetical protein XP_287116 [Mus musculus] 43 0.006
>pir||S51798 gamma-kafirin precursor - sorghum
Length = 212
Score = 49.7 bits (117), Expect = 6e-05
Identities = 41/139 (29%), Positives = 51/139 (36%), Gaps = 7/139 (5%)
Frame = -1
Query: 615 AAQTHEGYGSGCAFPQ--PCPVQQPTHTHIVPPCVFARYQAHAQAKLPSACPHPTVQSHG 442
AA T G GC P P PV P H+ PP V H P PHPT+ H
Sbjct: 17 AASTLTTGGCGCQTPHLPPPPVHLPPPVHLPPP-VHLPPPVHVPPPPPQCHPHPTLPPHP 75
Query: 441 RVSRRTTFHPRTRAVSQPMICEA*NAKPVVP-----CVVRIRRQVHAGYTPVITRPRMQR 277
HP P C PV P C+ +R Q TP + P+ Q
Sbjct: 76 HPCATYPPHPSPCHPGHPGSCGV-GGGPVTPPILGQCIEFLRHQCSPAATPYCS-PQCQA 133
Query: 276 LRLPLCSQRYRIARAHMHE 220
LR C Q ++ H ++
Sbjct: 134 LRQQCCQQLRQVEPLHRYQ 152
>emb|CAA44347.1| gamma-kafirin preprotein [Sorghum bicolor]
Length = 211
Score = 49.7 bits (117), Expect = 6e-05
Identities = 41/139 (29%), Positives = 51/139 (36%), Gaps = 7/139 (5%)
Frame = -1
Query: 615 AAQTHEGYGSGCAFPQ--PCPVQQPTHTHIVPPCVFARYQAHAQAKLPSACPHPTVQSHG 442
AA T G GC P P PV P H+ PP V H P PHPT+ H
Sbjct: 16 AASTLTTGGCGCQTPHLPPPPVHLPPPVHLPPP-VHLPPPVHVPPPPPQCHPHPTLPPHP 74
Query: 441 RVSRRTTFHPRTRAVSQPMICEA*NAKPVVP-----CVVRIRRQVHAGYTPVITRPRMQR 277
HP P C PV P C+ +R Q TP + P+ Q
Sbjct: 75 HPCATYPPHPSPCHPGHPGSCGV-GGGPVTPPILGQCIEFLRHQCSPAATPYCS-PQCQA 132
Query: 276 LRLPLCSQRYRIARAHMHE 220
LR C Q ++ H ++
Sbjct: 133 LRQQCCQQLRQVEPLHRYQ 151
>gb|AAA73078.1| [Sorghum bicolor endosperm tissue mRNA, complete CDS.], gene
product gi|228701|prf||1808331A gamma kafirin
Length = 212
Score = 49.3 bits (116), Expect = 8e-05
Identities = 41/139 (29%), Positives = 51/139 (36%), Gaps = 7/139 (5%)
Frame = -1
Query: 615 AAQTHEGYGSGCAFPQ--PCPVQQPTHTHIVPPCVFARYQAHAQAKLPSACPHPTVQSHG 442
AA T G GC P P PV P H+ PP V H P PHPT+ H
Sbjct: 17 AASTLTTGGCGCQTPHLPPPPVHLPPPVHLPPP-VHLPPPVHVPPPPPQCHPHPTLPPHP 75
Query: 441 RVSRRTTFHPRTRAVSQPMICEA*NAKPVVP-----CVVRIRRQVHAGYTPVITRPRMQR 277
HP P C PV P C+ +R Q TP + P+ Q
Sbjct: 76 HPCPTYPPHPSPCHPGHPGSCGV-GGGPVTPPILGQCIEFLRHQCSPAATPYCS-PQCQA 133
Query: 276 LRLPLCSQRYRIARAHMHE 220
LR C Q ++ H ++
Sbjct: 134 LRQQCCQQLRQVEPLHRYQ 152
>dbj|BAC85667.1| unnamed protein product [Homo sapiens]
Length = 207
Score = 44.3 bits (103), Expect = 0.003
Identities = 31/85 (36%), Positives = 40/85 (46%), Gaps = 2/85 (2%)
Frame = -3
Query: 781 CHAPAHPCSEALCVGAHTYKDTHA-SLRFVFLVLIDTRTETHTHTHRRACQFPFNTRSAN 605
C P + + A+C HT+ TH SL ++ + I T T THTHTH P +T +
Sbjct: 41 CPVPPYTHAHAVCTSLHTHTHTHTLSLYWLISLYIHTHTHTHTHTH-AVLYLPTHTHTHA 99
Query: 604 TRGLWERLRLPAALPRPT-TDTHTH 533
L A LP T T THTH
Sbjct: 100 VLTL-------AYLPIHTHTHTHTH 117
Score = 33.9 bits (76), Expect = 3.4
Identities = 29/95 (30%), Positives = 36/95 (37%), Gaps = 9/95 (9%)
Frame = -1
Query: 777 THQPTHAARRCAWGHTRTKTHTRLYAL---------FSLCSLTHVQRHTRTHTGALVSSH 625
TH THA A+ T THT + L SL LT + HT H + +H
Sbjct: 93 THTHTHAVLTLAYLPIHTHTHTHTHTLSCTSLYTHTLSLHWLTCLYTHTHAHAVLYLPTH 152
Query: 624 STHAAQTHEGYGSGCAFPQPCPVQQPTHTHIVPPC 520
TH H F +P P H+ PPC
Sbjct: 153 -THMLSLHWLPVLLTPFQEP-----PQAGHLGPPC 181
>ref|XP_287116.1| hypothetical protein XP_287116 [Mus musculus]
Length = 90
Score = 43.1 bits (100), Expect = 0.006
Identities = 19/44 (43%), Positives = 22/44 (49%)
Frame = -1
Query: 777 THQPTHAARRCAWGHTRTKTHTRLYALFSLCSLTHVQRHTRTHT 646
TH PTH + T T TH+R Y C+ TH HT THT
Sbjct: 30 THTPTHTQKHTYTDITHTHTHSRTYTDTHTCTHTHTHTHTHTHT 73
Score = 33.1 bits (74), Expect = 5.9
Identities = 22/67 (32%), Positives = 27/67 (39%)
Frame = -1
Query: 735 HTRTKTHTRLYALFSLCSLTHVQRHTRTHTGALVSSHSTHAAQTHEGYGSGCAFPQPCPV 556
H R HT +Y +L T+ Q+HT THT H T+ TH S
Sbjct: 6 HARMCVHTHIYRRHTL---TYTQKHTETHTPTHTQKH-TYTDITHTHTHSRTYTDTHTCT 61
Query: 555 QQPTHTH 535
THTH
Sbjct: 62 HTHTHTH 68
