Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC005205A_C01 KCC005205A_c01
(451 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_874623.1| Ribosomal protein L1 [Prochlorococcus marinus s... 99 3e-31
ref|NP_681087.1| 50S ribosomal protein L1 [Thermosynechococcus e... 103 2e-30
ref|NP_895913.1| 50S ribosomal protein L1 [Prochlorococcus marin... 94 2e-30
ref|NP_898431.1| 50S ribosomal protein L1 [Synechococcus sp. WH ... 97 2e-30
ref|NP_489341.1| 50S ribosomal protein L1 [Nostoc sp. PCC 7120] ... 101 6e-30
>ref|NP_874623.1| Ribosomal protein L1 [Prochlorococcus marinus subsp. marinus str.
CCMP1375] gi|33237206|gb|AAP99275.1| Ribosomal protein
L1 [Prochlorococcus marinus subsp. marinus str.
CCMP1375]
Length = 234
Score = 99.0 bits (245), Expect(2) = 3e-31
Identities = 44/75 (58%), Positives = 59/75 (78%)
Frame = +3
Query: 117 GKVEYRLDKTGNLHVLFGRADFKEEDLLFNLKAVQESIDANKPPGAKGVYWKSMYVCTTM 296
GK+E+R D+ G +HV FG+A F EDLL NLK + E+ID NKP GAKG YWKS+Y+ +TM
Sbjct: 158 GKLEFRADRAGIVHVRFGKASFSPEDLLENLKVLHEAIDRNKPSGAKGRYWKSLYITSTM 217
Query: 297 GPSLRIGVSALQNTK 341
GPS+ I ++ALQ++K
Sbjct: 218 GPSVEIDIAALQDSK 232
Score = 56.6 bits (135), Expect(2) = 3e-31
Identities = 26/27 (96%), Positives = 27/27 (99%)
Frame = +1
Query: 7 KVAKLGRVLGPRGLMPNPKAGTVTTDV 87
KVAKLGRVLGPRGLMPNPKAGTVTTD+
Sbjct: 122 KVAKLGRVLGPRGLMPNPKAGTVTTDL 148
>ref|NP_681087.1| 50S ribosomal protein L1 [Thermosynechococcus elongatus BP-1]
gi|33301564|sp|Q8DM27|RL1_SYNEL 50S ribosomal protein L1
gi|22294017|dbj|BAC07849.1| 50S ribosomal protein L1
[Thermosynechococcus elongatus BP-1]
Length = 237
Score = 103 bits (257), Expect(2) = 2e-30
Identities = 46/75 (61%), Positives = 61/75 (81%)
Frame = +3
Query: 117 GKVEYRLDKTGNLHVLFGRADFKEEDLLFNLKAVQESIDANKPPGAKGVYWKSMYVCTTM 296
GKVE+R D++G +HVLFG+A F EDLL NLKA+QESID N+P GAKG YW+S+YV TM
Sbjct: 158 GKVEFRADRSGIVHVLFGKASFSAEDLLVNLKALQESIDRNRPSGAKGRYWRSVYVAATM 217
Query: 297 GPSLRIGVSALQNTK 341
GPS+++ ++AL+ K
Sbjct: 218 GPSIQVDINALRELK 232
Score = 48.9 bits (115), Expect(2) = 2e-30
Identities = 21/27 (77%), Positives = 26/27 (95%)
Frame = +1
Query: 7 KVAKLGRVLGPRGLMPNPKAGTVTTDV 87
+VAK+GR+LGPRGLMP+PKAGTVT D+
Sbjct: 122 QVAKVGRILGPRGLMPSPKAGTVTFDL 148
>ref|NP_895913.1| 50S ribosomal protein L1 [Prochlorococcus marinus str. MIT 9313]
gi|33641133|emb|CAE22263.1| 50S ribosomal protein L1
[Prochlorococcus marinus str. MIT 9313]
Length = 235
Score = 94.4 bits (233), Expect(2) = 2e-30
Identities = 42/73 (57%), Positives = 57/73 (77%)
Frame = +3
Query: 117 GKVEYRLDKTGNLHVLFGRADFKEEDLLFNLKAVQESIDANKPPGAKGVYWKSMYVCTTM 296
GK+E+R D+ G +HV FG+A F + LL NLK +QE+ID NKP GAKG YWKS+Y+ +TM
Sbjct: 158 GKLEFRADRAGIVHVRFGKASFSADALLENLKTLQETIDRNKPSGAKGRYWKSLYITSTM 217
Query: 297 GPSLRIGVSALQN 335
GPS+ + V+ALQ+
Sbjct: 218 GPSVEVDVTALQD 230
Score = 58.2 bits (139), Expect(2) = 2e-30
Identities = 27/28 (96%), Positives = 28/28 (99%)
Frame = +1
Query: 7 KVAKLGRVLGPRGLMPNPKAGTVTTDVA 90
KVAKLGRVLGPRGLMPNPKAGTVTTD+A
Sbjct: 122 KVAKLGRVLGPRGLMPNPKAGTVTTDLA 149
>ref|NP_898431.1| 50S ribosomal protein L1 [Synechococcus sp. WH 8102]
gi|33639473|emb|CAE08857.1| 50S ribosomal protein L1
[Synechococcus sp. WH 8102]
Length = 235
Score = 96.7 bits (239), Expect(2) = 2e-30
Identities = 45/73 (61%), Positives = 57/73 (77%)
Frame = +3
Query: 117 GKVEYRLDKTGNLHVLFGRADFKEEDLLFNLKAVQESIDANKPPGAKGVYWKSMYVCTTM 296
GK+E+R D+TG +HV FG+A F E LL NLK +QE+ID NKP GAKG YWKS+YV +TM
Sbjct: 158 GKLEFRADRTGIVHVRFGKASFTAEALLQNLKTLQETIDRNKPSGAKGRYWKSLYVTSTM 217
Query: 297 GPSLRIGVSALQN 335
GPS+ + SALQ+
Sbjct: 218 GPSVEVDFSALQD 230
Score = 55.8 bits (133), Expect(2) = 2e-30
Identities = 26/28 (92%), Positives = 27/28 (95%)
Frame = +1
Query: 7 KVAKLGRVLGPRGLMPNPKAGTVTTDVA 90
KVAKLGRVLGPRGLMPNPKAGTVT D+A
Sbjct: 122 KVAKLGRVLGPRGLMPNPKAGTVTIDLA 149
>ref|NP_489341.1| 50S ribosomal protein L1 [Nostoc sp. PCC 7120]
gi|33301461|sp|Q8YLJ7|RL1_ANASP 50S ribosomal protein L1
gi|25294935|pir||AE2468 50S ribosomal protein L1
[imported] - Nostoc sp. (strain PCC 7120)
gi|17134440|dbj|BAB77000.1| 50S ribosomal protein L1
[Nostoc sp. PCC 7120]
Length = 238
Score = 101 bits (252), Expect(2) = 6e-30
Identities = 44/75 (58%), Positives = 61/75 (80%)
Frame = +3
Query: 117 GKVEYRLDKTGNLHVLFGRADFKEEDLLFNLKAVQESIDANKPPGAKGVYWKSMYVCTTM 296
GK+E+R D+TG +HV+FG+A F EDLL NLKA+QE+ID N+P GAKG YW++ YV TM
Sbjct: 159 GKLEFRADRTGIVHVMFGKASFSPEDLLVNLKALQETIDRNRPSGAKGRYWRTFYVSATM 218
Query: 297 GPSLRIGVSALQNTK 341
GPS+R+ ++AL++ K
Sbjct: 219 GPSIRVDINALRDYK 233
Score = 49.3 bits (116), Expect(2) = 6e-30
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +1
Query: 7 KVAKLGRVLGPRGLMPNPKAGTVTTDVA 90
+VAKLG++LGPRGLMP+PK GTVT DVA
Sbjct: 123 QVAKLGKMLGPRGLMPSPKGGTVTFDVA 150
